Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------ARR14(2)    <---------MYB52(2)                               --------->ARR14(2)   --------->ANAC58                       <---------At4g35610                              ------>ZmHOX2a(1)     --------->ANAC46                       --------->ZAT2                            ------>ZmHOX2a(2)       --------->ANAC58                       --------->At4g35610                      <----------DOF2    --------->WOX13(1)                     <---------GLK1(2)                     <---------ANAC58   --------->AHL20(2)           --------->ANAC46  --------->ANAC58                     <---------ANAC58   <---------AHL20(2)           --------->ANAC58  --------->ANAC58                 <---------MYB52(1)    <---------ATHB12              --------->ANAC58  --------->ANAC46   aactctaaattgaaacctcgtttgctttgatcctatctgcaataaatcaaaaacaaggaaccaattgtttcacacaagaacaaattctcaagcagctaca  5020300                                                                ------>ZmHOX2a(2)                                                              <---------ARR14(2)                                                              --------->ARR11(3)                                                              <---------ARR11(3)                                                          <---------At4g35610                                                        <--------P                                                      <------MYB83<---------YAB1                                                     <---------AtMYB61                      ---------                                          ------->TEIL<------MYB46(1)             ------->TEIL                                  --------->TOE2(3) <---------WOX13(1) ----------->GT1      ---------                                ------->TEIL      --------->ATHB12------>ZmHOX2a(1)    --------->ANAC46   aaaacatgttttctctagctcaagtctcaatgtgaaccctaatgaaacttatggattggtagatgatcctgaatggtgaaaatgaatataagaaacgcat  5020400                                      <---------ANAC58                                <------ZmHOX2a(2)                                <---------YAB1                               <---------ARR11(3)                               --------->ARR11(3)                 --------------->AGL15<---------ANAC46                 ======================HOX2a_HOX2a                 ====================================================================================                 ------>ZmHOX2a(1)    <---------ANAC58         ----------->GT1                --------->TOE2(3) --------->KAN4(2)          ------->TEIL               ---------->DOF2                --------->TOE2(2)<---------KAN4(1)        <---------YAB1            ----------->RAV1(1)                --------->TOE1(2)--------->KAN4(1)      --------->YAB1        --------->ANAC58      --------->AHL20(2)      --------->YAB1           <------ZmHOX2a(2)    ---------->DOF2 >ANAC58     ------->TEIL    --------->ICU4         ------>ZmHOX2a(2)     --------->ANAC46 >ANAC58  <---------YAB1   ---------->DOF2      <---------YAB1 --------->YAB1 --------->ANAC58   tgatcaaataatatgaatcctaagaatagcaaagatcattccttgaaaatatgatcgatcatgaatcgtattatctccgaaaggaacaacaaaagtacca  5020500                                                                                      ------>ZmHOX2a(2)                                                                                      ===============                                                                                      ===============                                                                            --------->ANAC58                                                                         --------->ARR14(2)                                                                         <---------PCF5                                                          <---------ANAC55(1)<---------At4g35610                                                          --------->ANAC55(2)<------NtERF2                                                          <---------ANAC46 --------->ZAT18                                                          <---------ANAC55(2)--------->At4g35610                                                          <------MYB46(1)<---------ARR14(2)                        --------->MYB46(3)        --------->TOE2(3) <---------ANAC58 --------->At4g35610                      <-----------GT1             --------->TOE1(3) <---------ANAC58 <---------At4g35610                      --------->MYB52(1)  ---------->DOF2 <------MYB83  <---------ANAC58            <    <---------------AGL15          --------->ANAC58      --------->MYB111(1)--------->ANAC58        = ===================MADS_MADS      --------->ANAC58      --------->MYB59<---------ANAC58            =   atggaactcaatctggtattagattaaccgatggaacacgaacaaaaagaaaccctaattaggtgttcttacttgggtccgctactgatctgagtttgat  5020600                            --------->ANAC46                            <---------bZIP60(1)                            --------->bZIP60(1)                            =============================bZIP_DOF               ------>ZmHOX2a(2)               ==============================HOX2a_HOX2a              <---------GLK1(1)              <------ZmHOX2a(2)              <---------HSFB2a(1)              ===============================HOX2a_HOX2a             <---------ARR14(2)             --------->ARR14(3)             --------->ARR14(2)             <---------ARR14(3)             --------->ARR11(3)             <---------ARR11(3)                                                 --------->DAG2             <-----------ARR10                                       <------ZmHOX2a(2)            <------ZmHOX2a(1)                                       --------->ARR11(3)           --------->HSFC1(2)                                       <---------ARR11(3)      <--------           <---------HSFC1(2)                                      <---------GLK1(1)        --------- ==================HOX2a_HOX2a                           --------->YAB1         <---------TOE1(3) ======HOX2a_HOX2a          --------->TGA1a              --------->ATHB12       <---------TOE2(3)   - ------ZmHOX2a(1)    --------->ARR14(2)                 --------->ICU4      --------->YAB1  <-------- ====================HOX2a_HOX2a              ---------->DOF2      --------->GLK1(1)        --------- =====================HOX2a_HOX2a     <------ZmHOX2a(1) <---------YAB1------>ZmHOX2a(2)    --------->AHL20(2)   gaggaatcagagaaggatcttcgaaacctcacatcacagaggagagaagaaagagagaatgattaagagagatctcactcataaggtttgagaataaatt  5020700                                                                      <---------AHL20(2)                                                                      --------->AHL20(2)                                                                     --------->AHL20(2)                                                                     --------->YAB1                                                                    <---------ATHB12                                                                  --------->WOX13(1)                                                                ------------>CBF      *TSS                                                     ------>NtERF2 -AHL20(1)           <----------DOF2            <<<<<<<<<TBF1 --------->ANAC46                <------ >AHL20(2)           ------>ZmHOX2a(1)       <<<<<<<<<TBF1    --------->ANAC58         <---------AHL20(2) ----->NtERF2    <---------ARR14(2)       <<<<<<<<<TBF1       --------->ANAC58        --------->AHL20(2) -AHL20(2)       --------->ARR14(2)    <<<<<<<<<TBF1     <-----------ARR10         <----------DOF2 >AHL20(1)   --------->LBD16    ------>ZmHOX2a(1)       <---------CCA1(2)         <---------DAG2   gcagccaaaatgttccccaaatcctttttatgtccttgttcttcttcttcttcttcccatctctacgccaattaaaatgctctaccttttaaattccttt  5020800           <---------AHL20(1)           --------->AHL20(1)           <---------AHL20(2)           --------->AHL20(2)          --------->AHL20(2)          --------->YAB1          <---------AHL20(2)       <--------ATHB1       <--------HAHB4       -------->HAHB4       --------->YAB1       <---------ICU4       --------->ATHB51      --------->ICU4      <---------YAB1                                    <---------------AtSPL8      --------->AHL20(2)                                --------------->AtSPL8      <---------ATHB51                               <---------AHL20(2)                       -------    --------->YAB1                                  <---------YAB1                            <------MYB83  --------->AHL20(1)------>MYB46(1)                --------->AHL20(2)                         <------MYB46(1)  --------->AHL20(2)------>MYB83             ------>ZmHOX2a(2)                  <---------ARR11(3) --------->YAB1<-----------GT1             --------->ARR11(3)      ---------->DOF2           -------- ----DOF2<---------YAB1                    <---------ARR11(3)    --------->YAB1 --------->ARR11(3)  <   taaaaataataattatattaccaaatgctctctgtacattgatatgatctcatttttatttgtacattcaaaagctattggagatttttgtttgtttggt  5020900            <----------DOF2           ------>ZmHOX2a(2)                                                --------->YAB1          <------ZmHOX2a(2)                    --------->ICU4       <---------ARR11(3)         <---------ARR11(3)            --------->At4g35610          --------->ARR11(3) --------->YAB1                        --------->ZAT2             <---------YAB1 <---------ICU4--------->REM1(2)       <---------At4g35610      --------->YAB1 ---->GT1--------->ARR11(3)            <---------ZAT2 <------ZmHOX2a(1)  --------->YAB1          ---- ->MYB59------->GAMYB              <-----------GT1  --------->MYB59--------->YAB1               <---- ---------ATHB12             --------->YAB1  ---------->DOF2   --------->ICU4       --------->ALFIN1   taatcatcaacgatctttgtagagattacattcaaaatcacagctcgaaaagattaggaactgaaatgatgatattaataagaaatgtggagcaaatagc  5021000                                            <----------DOF2                                           <---------ANAC58                             --------->AHL20(2)                             <---------AHL20(2)                                                    --                        ------>ZmHOX2a(1)  <---------ANAC58                                      <--- ------->RAV1(1)       --------->TOE2(3)------->GAMYB                                        -------- ------ID1        --------->ALFIN1  --------->MYB46(3)                                ---------->DOF2   aacaaaacaagtgtataagtgtgttcctcaatttatcaacaactggcttttctggtcataacctctccctctctctcttaataaccaaaaaagaattata  5021100                                            <---------ARR14(2)    <---------ATHB12                        --------->ARR14(2) ------->ANAC46                  <-------TEIL           <---------GLK1(2)                          -- --------GT1         <---------YAB1         <---------GLK1(2)     ---------->DOF2         ---------->DOF2 ->YAB1   <----------DOF2       --------->CCA1(2)   ---------->DOF2--------->DAG2    <-----------GT1   aacccaatctttctttccccattcttataaaaagattcaagaattggattctccaaaagaatttcaaaaaaagggtaaccttctattttacagaaagaat  5021200  Previous    Next  AGI:  At5g15460.1    Description:  MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2). Identical to Membrane-anchored ubiquitin-fold protein 2 (MUB2) [Arabidopsis Thaliana] (GB:Q8LCS8;GB:Q9LF36); similar to MUB1 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 PRECURSOR) [Arabidopsis thaliana] (TAIR:AT3G01050.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96631.1); contains InterPro domain Membrane-anchored ubiquitin-fold protein, HCG-1 (InterPro:IPR017000) Range:  from: 5018714    to: 5020706    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g15470.1    Description:  GAUT14 (Galacturonosyltransferase 14); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. similar to GAUT13 (Galacturonosyltransferase 13) [Arabidopsis thaliana] (TAIR:AT3G01040.2); similar to GAUT13 (Galacturonosyltransferase 13), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT3G01040.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68963.1); similar to Glycosyl transferase family 8 protein, expressed [Oryza sativa (japonica Range:  from: 5021013    to: 5024745    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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