Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             ----------->GT1                                                         --------->ZAT14               --------->ARR14(2)                                                         <---------ZAT14               <---------ARR14(2)                                       --------------->AGL15                <-----------HVH21 >ANAC58            --------->ANAC58   ============================================================== >O2                --------->ANAC58   <---------------AGL15          >>>>>>>>>>>>>>>>>LFY        <-- >bZIP60(2)   <---------ANAC46        ----------------->AGL2--------->At5g28300      --------->LBD16 >ANAC58 <---------ANAC58       --------->TOE2(3)        <---------ZAT18   <---------ZAT6   <-------- >ANAC46 <---------ANAC58      --------->YAB1    --------->WOX13(1)  ------>ZmHOX2a(1) <---------GLK1(2)   tttctgtgaattcttgctgtgtaagctatacaaacatcaaacccaaattagcaatccagtacagtaaaatccttccagtgtcaattccagatttgtgatt  5018000                                                                                       --------->ALFIN1                                                                                     ================                                                                                     --------->TGA1a                                                                                     <---------ANAC58                                                                                     ----------------                                                                                     <---------O2                                                                                     <---------TGA1a                                                                                     <---------ANAC46                                                                                     <---------ANAC58                                                                                    --------->ATERF1(1)                                                                                   ------>NtERF2                                                                                   <---------RAP2.6(3)                                                                       <---------At4g35610                                                               ================================MYC_MYB                                                               ------->GAMYB      --------->RAP2.6(2)                                                               <---------SPL7     --------->DEAR3(1)                                                              --------->MYB46(3)  --------->RAP2.3(2)                                                <-----------HVH21 --------->MYB46(3)<------NtERF2                                              <---------HSFC1(2) --------->SPL7  --------->RAP2.3(1)                                --------------->AGL15         <---------MYB52(2) --------->DEAR3(2)                        <-----------GT1       --------->HSFC1(2)--------->MYB52(1)--------->RAP2.3(3)          ---------->DOF2       <---------------AGL15      <---------WRKY38(1) --------->ANAC46 ================================================MADS_MADS <---------WRKY12    --------->ANAC58 -------ANAC55(2)     <----------DOF2    >>>>>>>>>TBF1 --------->TOE1(1)       --------->ANAC58 -YAB1   ------>ZmHOX2a(1)     ----------------->AGL3  --------->TOE2(1)  --------->YAB1   acttaaaaatcctaaagtttcagactttacccttccattagaagaagaagcttcacatcggacaacgaacggccgatgatcaagccgccgtgtgagcctc  5018100                                                    <------NtERF2                                                    <-----------RAV1(2)                                                   --------->At4g35610                                                   --------->LBD16                                                  --------->RAP2.6(2)                                                  ----------->RAV1(1)                                                  --------->DEAR3(1)                                              --------->DAG2                                             ---------->DOF2                                           <------NtERF2                                          --------->LBD16        <---------AHL20(2)               --------->LBD16                             ------>ZmHOX2a(1)      <----------DOF2                   <---------LBD16                             --------->TOE1(2) ================bZIP_DOF           <---------ATERF1(1)                             --------->TOE2(2) ----->WRI1         --------->CCA1(2)--------->ATERF1(1)                      --------->AHL20(2) <---   gcgctctgctttaatttgagagatttgaaggaactaggcttcgccggaaaagccgcagaaggttgaagatgagaaaacgaataaatccttcgagtctccg  5018200                           --------->RAP2.3(1)                           <------NtERF2                          <---------ATERF1(1)                          --------->ABI4(1)                         --------->RRTF1(3)                         --------->RAP2.3(3)                         --------->RAP2.3(2)                         <---------DEAR3(1)                         --------->DEAR3(1)                        --------->RAP2.3(1)                <---------LBD16                        --------->RRTF1(1)         <------NtERF2                        --------->ERF1            ------>NtERF2                        --------->DEAR4(2)       --------->DEAR3(1)            --------->REM1(1)<---------SPL7      <---------ETT(2)            --------->ANAC46--------->DEAR3(1)  --------->ATERF1(1)           <---------ZAT14------>NtERF2         <------NtERF2                             --------->DAG2  <---------ZAT14       --------->ORA47(2)     <---------ATERF1(1)             --------->ANAC58   <--  --------->ZAT14       --------->ATERF1(1)   --------->DEAR3(1)               --------->ANAC46  ---- ------>ZmHOX2a(1)    --------->ANAC46       --------->ATERF1(1)   --------->AHL20(2)    ---------->DOF2 ------MYB52(1)     ---------->DOF2    <------NtERF2  <---------MYB52(1)       --------->ANAC58  <---   ttcctacactgactacaccactaaacgccgccgtagcagtcgtcgtagccgtcgccattagctcggaaatttaagaacagcaagcaattgaaaaaggaag  5018300            <--------P           <---------MYB52(1)     --------->MYB52(1)                                   <---------ANAC46      ----------->RAV1(1)      --------->AtMYB61                                  <----------DOF2 ----ZmHOX2a(2)          --------->ARR14(2)                     ---------->DOF2  <---------ANAC58 ----->ARR11(3)          <---------ARR14(2)       *TSS   <---------GLK1(1)  <----------DOF2   <------ ------ARR11(3)         --------->GLK1(1)  <---------ARR11(3) --------->At4g35610<---------ANAC58   atcaaatacaacaggtagtttagcacaaatccaccaaaacggcgagatgtttacttaagaaatcagcaaagagaaacgcttttgctttctcgtgtagttt  5018400                                                                           <---------ANAC46                                                                       <---------HSFB2a(1)                                                                    <------NtERF2                                                                   --------->LBD16                                                                 --------->ATERF1(1)                                                                 <------NtERF2                                                                 <---------LBD16                      <---------ANAC46                          ------>NtERF2                      ----------->GT1                          <---------DEAR3(1)            ------->TEIL                 ----------->GT1              >>>>>>>>>TBF1    --------->ANAC46          ------------                --------->DAG2             >>>>>>>>>TBF1       --------->DEAR3(1)  --------->MYB52(1) ---ZAT6      ---------->DOF2       ---------->DOF2         --------->ANAC46     --------->MYB46(3)   tagcgagaaccaagagaaaaggtgaagtagaaaactaataaagaagaagaagaagttgctaaacgacgccggagtcttcgtgaaccatcgggatgtactt  5018500                         <---------ZAT18                         --------->ZAT14                     <-------MYC4                     <-------MYC3                     ------->MYC2                     ------->MYC4                     <-------MYC2                     ------->MYC3                                                                   <                    <---------TGA1a                                                                 -                    <--------ABF1                                                                 <--                    --------->TGA1a                                                               <--                    --------->O2                                                                  ---                    --------->ANAC55(2)                                                           <--                    <---------ANAC55(2)                                                          ----                    <---------O2                                         --------->ORA47(1)      <---               ----------->HVH21                                        --------->DEAR3(1)       ----             ----------->RAV1(2)            <------ZmHOX2a(1)          --------->MYB46(3)        <---             <---------At4g35610          <---------TOE2(2)            --------->DEAR3(2)      ------      --------->ARR11(3) <---------ZAT14  <---------TOE2(3)           ------->TEIL ---------->DOF2---      <---------ARR11(3) --------->ZAT18--------------------->WRI1   <-----------GT1         -------- --->AtSPL8  --------->At4g35610        --------->TOE1(2)     <---------AHL20(2)--------->AHL20(2)---   actactgagaccttcttctgacacgtgttcactctcagaaaacttaggatttttcgaagtagaattaatatgaaccgtccaaaaatatagcagaaaataa  5018600     <---------AHL20(2)     --------->ARR11(3)     <---------AHL20(1)     --------->AHL20(1)  --------->AHL20(2) <---------AHL20(2) --------->AHL20(2) ---------YAB1 -------->ICU4 ------ATHB1 ------HAHB4 ------>ATHB51 -------ICU4 ----->AHL20(2)               <---------MYB52(1) ------ATHB51                <---------At4g35610          <-------GAMYB               --------->ANAC46 ----->ICU4                 <---------ANAC46             <---------ZAT6               --------->ANAC58 ------YAB1                 <---------MYB46(3)  <---------ALFIN1                      --------->ANAC58 --->YAB1       --------->LBD16 --------->YAB1 <---------ZAT18                     --------->MYB46(3) ------>YAB1   <---------HSFB2a(2)             --------->ZAT18           <---------ATHB12    <------- ->AHL20(2)    --------->HSFB2a(2)       --------->ARR14(2)             ------>MYB83 <---------LBD16- ----->HAHB4  <---------LBD16<-------GAMYB   --------->PCF2             ------>MYB46(1)     ---------   taattaatatatagtttcccgaattttgggccgttgataacgagattggcccactacgactgttaacagaaaccaaacattgttaaccacggaaattatg  5018700                                                       <---------ICU4                                                       <--------ATHB1                                                       --------->ATHB51                                                       --------->AHL20(2)                                                      <---------ATHB12                                                      <---------ATHB51                       <----------DOF2      <---------MYB46(3)                       <---------DAG2       --------->MYB52(2) --------->ANAC46                    <-----------GT1  <---------ARR14(2)<---------AHL20(2)               --------->ICU4   --------->AtLEC2      --------->ICU4      --------->ARR14(2)          <---------ANAC58     --------->LBD16      ------>MYB83          --------->GLK1(2)        --          <---------ANAC46    <---------ANAC58      ------>MYB46(1)       <---------ARR14(2)       --          <---------ANAC55(2) <---------ANAC58    <---------MYB59 --------->ALFIN1              ----- --ICU4   <---------ANAC58    <---------ANAC55(1)<---------ANAC55(2)   <---------ANAC58         ----- ---------->GT1<---------YAB1 <---------ANAC46 <-----------GT1<---------LBD16 --------->LBD16 <------ >ICU4    --------->ANAC55(2) <---------ANAC55(2)--------->ANAC55(2)   <---------ANAC58       -------   tcaagttatatttcgtgatgattcactttattccgtgcaaatttgtttgttacctaataatttccacggtgttgcgaatccgaaatacaatagaaaccaa  5018800                                  <-----------HVH21                                 ====================bZIP_DOF                                 <---------bZIP60(1)                        <-----------HVH21                       --------->bZIP60(1)              --------->ANAC58   --------->TGA1a              --------->ANAC58   --------->bZIP60(1)   --------->ANAC58    <---------bZIP60(1)   --------->ANAC58  <---------ICU4 ==========================================bZIP_DOF ---------->DOF2     --------->YAB1 ------->TOE2(3)    <---------ATHB12 ------->TOE1(3)  --------->WOX13(1)      ---------->DOF2           --------->DAG2 ->MYB83<------ZmHOX2a(2)    <-----------HVH21<---------ICU4      ---------->DOF2 ->MYB46(1)  --------->DAG2 --------->bZIP60(1)      --------->ANAC58 ---MYB59   ---------->DOF2 <---------bZIP60(1)      --------->ANAC46                           ----- -->AtMYB61 ===============================bZIP_DOF  --------->ANAC58 --------->ARR11(3)      <------   acctcaagcgatcaaaaagccaatcatgtcatgtcatgtcagaaaaaagaattacaaggaacaagagcaaaaggtattgaagaaggctcaagaacagaat  5018900  Previous    Next  AGI:  At5g15450.1    Description:  APG6/CLPB-P/CLPB3 (ALBINO AND PALE GREEN 6); ATP binding / ATPase. similar to CLPC (HEAT SHOCK PROTEIN 93-V), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT5G50920.1); similar to ATHSP101 (HEAT SHOCK PROTEIN 101), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT1G74310.1); similar to CLPB-M/CLPB4/HSP98.7 (HEAT SHOCK PROTEIN 98.7), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT2G25140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15049.1); similar to heat shock protein [Solanum lycopersicum] (GB:BAE06227.1); similar to hypothetical protein OsI_011765 [Oryza sativa (indica cultivar-group)] (GB:EAY90532.1); conta Range:  from: 5014215    to: 5018350    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g15460.1    Description:  MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2). Identical to Membrane-anchored ubiquitin-fold protein 2 (MUB2) [Arabidopsis Thaliana] (GB:Q8LCS8;GB:Q9LF36); similar to MUB1 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 PRECURSOR) [Arabidopsis thaliana] (TAIR:AT3G01050.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96631.1); contains InterPro domain Membrane-anchored ubiquitin-fold protein, HCG-1 (InterPro:IPR017000) Range:  from: 5018714    to: 5020706    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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