Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->KAN4(2)                            <---------ICU4                            -------->HAHB4                           <---------YAB1                           --------->ICU4                         --------->YAB1                              <---------AHL20(2)            --------->TOE2(3) <---------YAB1         --------->AHL20(2)<-----------GT1         ----------->RAV1(1)--------->YAB1  --------->GLK1(2)   <---------AHL20(2)   <---------HSFB2a(2) --------->AHL20(2)  <---------GLK1(2)  <----------DOF2   --------->HSFB2a(2) <---------AHL20(2)--------->ANAC58  --------->GLK1(2)                   ------ >DOF2----------->RAV1(1)<---------ICU4  --------->ANAC58<---------AHL20(2)                ------->TEIL   ttcttctgcaacaacataaacacataaaaatgattatactcacaagaatctctaactaaataatcttttattttttcttcacttgtatttatgtatgtat  5011700                                                                  --------->ANAC55(2)                                                                  <---------ANAC46                                                                  <---------ANAC55(1)                                                    <-----------RAV1(1)                        <---------ZAT14         --------------->AGL15                        --------->ZAT14   --------->GLK1(2)       <---------ANAC55(2)                        --------->ZAT18  <---------GLK1(2)     <---------YAB1                <------- ->TEIL    <---------ZAT6   <---------ATHB12 <-----------GT1--------->ICU4            <-----------RAV1(1)   gtaaacatatgtagagtttgtaagagtgcaatgactcacataagattctacaatttgtgggagttattatgtgttatcgaatttctaactgttgtctttc  5011800                                                              ------>MYB46(1)                                                              ------>MYB83                                                            <---------MYB59                        --                                                --------->GLK1(2)          --------->At4g35610     --                             <----------DOF2<-----------GT1 <---------MYB111(1)             <--------                         <-----------GT1 ----------->GT1    --------->MYB46(3)    ----------->GT1  -- ---DOF2           <---------YAB1  <-----------GT1          <---------MYB46(2)  ---------->DOF2    --   caagaattgactaagaaggttatgttttaaacttttgtaactatagttacaatctgtgagtaccaaacaaaactaggggctgaaaagaaatataaaacca  5011900                                                                 <----------DOF2                                                              <---------ARR11(1)                                                         <-----------HVH21                                                       ------->MYC3                                                       >>>>>>>>>>BZIP12                                                       >>>>>>>>>>ABI5              ------>NtERF2                            <-------MYC3              <---------RAP2.6(3)                     --------->TGA1a              --------->ORA47(1)                      --------->O2          --------->ANAC46                            ======================bZIP_DOF          --------->ANAC58                            <---------TGA1a    --------->ANAC58                                  <---------O2    --------->ANAC58                                --------->MYB52(1)             --------->WRKY12  <---------ALFIN1  --------->AHL20(2)       ===================bZIP_DOF   <------------CBF ------->ANAC46   <----------DOF2            <----------DOF2  --------->ARR11(3)  --------->DOF5.7(2) ------->ANAC58   ------>ZmHOX2a(1)       --------->GLK1(2)   <---------ARR11(3)<---------ANAC46 ---GT1   --------->ANAC58    --------->WRKY38(1) --------->MYB46(3)   <---------MYB46(3)  <--------- ------->ANAC58   ==============================================bZIP_DOF <---------YAB1--------->TOE2(3) ------->PCF2--------->DEAR3(1)          <---------GLK1(2)   <---------CCA1(2) ---------->ID1   gaccccacgctcacgccgtcctttaaatgccattgactatgtagattctttagccaacgtgtcatatctttagtggttattgtcgtttacctctatcaca  5012000                             <---------AHL20(2)                            --------->AHL20(2)                            <---------AHL20(2)                  --------->AHL20(2)                            --------->AHL20(1)                  --------->ICU4                            <---------AHL20(1)                  *TSS                 <----------DOF2                           --------->AHL20(2)                   <---------AHL20(2)  <---------ANAC58                           <---------AHL20(2)              ----------->GT1       <---------GLK1(1)                        --------->AHL20(2)     --------->At4g35610   ---------->DOF2<---------ANAC58                <---------ANAC58     <----------DOF2    <---------ANAC46         --------->GLK1(1)     --------->ZAT6<---------WRKY18(1)         <---------At4g35610  --------->AHL20(2)    ------>ZmHOX2a(1) <-----------HVH21 >>>>>>>>>WRKY18<-----------GT1--------------->AGL15        <---------TOE2(3)     < --HVH21        <---------ANAC58 <-----------GT1 <---------------AGL15    <----------DOF2--------->TOE2(3)   gactgtcactctaccattccttgacttaaattaattttcctttcttctctgctacatggagtagaaaaaattaaagctttgagatttctttccttatcga  5012100                    <---------MYB52(1)                    ---------->ID1      <---------GLK1(2)                      --------->LBD16                   <-------GAMYB    --------->At4g35610                       <---------ANAC46                  --------->MYB52(2)----------->RAV1(2)        <---------ARR14(2)        --------->HSFB2a(2)         <---------At4g35610        --------->ARR14(2)        --------->LBD16            ------>NtERF2               --------->GLK1(2)        ------>NtERF2          --------->HSFB2a(2)     <---------ANAC58       <---------ANAC58       --------->ANAC46        <---------HSFB2a(2)     <---------ANAC58       <---------ANAC58  -----      <---------LBD16        ----------->RAV1(2)       <---------ANAC46      <---------LBD16<-------- -----------GT1   <---------MYB46(3)<---------ZAT2  <----------DOF2      <-----------RAV1(1)---------   tttttctctccgcgaattgttcgttgttttcttctggcacctgattctcatcttctttcttgtggaatctgggttttgttgcggagttttcgaggttcct  5012200                                                                            --------->AHL20(2)                                                ---------->ID1            <----------DOF2      <---------ANAC58               <---------MYB46(3)                  --------->TOE2(3)      <---------ANAC58               <------MYB83                 <----------DOF2      <---------ANAC46               <------MYB46(1)             <---------ANAC46   <---------MYB52(1)               <---------AtMYB61            <---------ANAC58 --------->MYB52(2)               <---------ANAC58               <---------ANAC58                  >> <---------MYB46(3)               <---------ANAC58          <---------MYB46(3)                  <---- ->ZmHOX2a(1)                     <---------ANAC46          <---------REM1(1)                <------- -ARR14(2)             <----------DOF2      <----------DOF2 <-----------RAV1(1)  --------->ZAT18----- >ARR14(2) <-------GAMYB         <---------MYB46(3)   <-----------RAV1(1)--------->TOE1(3)   <-------   cattcgttgcttctgttgaaactctcttttttttttgggtggtttactttgtttttttgttgttgttgctttcaacctttaaatgccctaattttgaggt  5012300     <---------AtMYB61    --------->At4g35610         <---------ZAT2                                < >>>>>ZML2             --------->At4g35610            <---------At4g35610                    -------- -----ARR14(2)       <------ZmHOX2a(1)                --------->At4g35610               --------->HSFB2a(2) --TOE1(3)    <---------YAB1                  <-------TEIL                  <---------At5g28300  <--- ---->GLK1(2) <---------TOE1(3)          ---------->DOF2        --------->At4g35610     <---------HSFB2a(2) --TOE2(3)    <---------TOE2(3)  <----------DOF2     --------->MYB52(2)    <-----------GT1  ---------   tctagttgtggtttttaagattaggagcagaagccctttcgactaaagttcatgttagctgcaatttgctgaagtattcacagttttgttctggtaaagt  5012400                           <---------ANAC46                           <---------ANAC58                       <----------DOF2                      ------>ZmHOX2a(2)                    <---------ARR11(3)                    <---------ARR14(3)      <-----------GT1<------ZmHOX2a(2)                 ------->TEIL     --------->ZAT14--------->ARR14(3)           <-----------GT1    <----------DOF2 --------->AGP1>>>>>>>ZML2  <----------DOF2                      ---------->DOF2 ---------CCA1(2)   --------->ARR14(2)      <---------ANAC58                      <------ZmHOX2a(1) ->DAG2             <---------ARR14(2)      <---------ANAC46         --------->CCA1(2)  <------ZmHOX2a(1) ----TEIL           --------->ARR11(3) <-----------RAV1(1)   --------->ICU4      --------->LBD16 ->DOF2    <----------DOF2 <---------ANAC58 <---------ANAC58 <---------YAB1    <---------LBD16 <-----   tcatctctttactcttttttaagatctttgtgtgttctagtttgtggcgtttttctgtatgtgatgactagagatgggttttcaggaaaaggatttagtg  5012500                                                     ------>ZmHOX2a(2)                                                    --------->CCA1(2)                                                    <------ZmHOX2a(2)                                                   --------->AGP1                                                   <---------AGP1            <----------DOF2                                                   <---------ARR11(3)      <---------ANAC58                                                   <---------ARR14(2)  <-------GAMYB<---------ARR11(3)                                         <---------ANAC46           <---------ANAC58--------->ARR11(3)            <---------GLK1(2)            <---------ANAC58           <---------ANAC58<---------ARR14(3)            --------->ARR14(2)           <---------ANAC58          <---------MYB46(3)      <-----------GT1                 <---------bZIP60(1)         <---------ANAC46  --------->ARR14(3)   --------->GLK1(1)             <---------ANAC58  --------->ARR14(2) <-----------RAV1(1)   <---------GLK1(1) --------->YAB1   --------->bZIP60(1)   <-------TEIL   <---------ANAC58     <---- ----ZAT6   <---------ARR14(2)   <---------ANAC58  --------->ARR11(3) --------->ALFIN1     <---------At4g35610   ttcagatttcactggattttcaataagagtcttgttcgtgatgtcgttttatagatctgagttacattgtgggtgttgcctttgaaggtcttgagctact  5012600  Previous    Next  AGI:  At5g15430.1    Description:  calmodulin-binding protein-related. similar to calmodulin-binding protein-related [Arabidopsis thaliana] (TAIR:AT5G39380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15046.1); contains InterPro domain Calmodulin-binding, plant (InterPro:IPR012417) Range:  from: 5009879    to: 5011740    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g15440.1    Description:  EDL1 (EID1-LIKE 1). similar to EDL2 (EID1-LIKE 2) [Arabidopsis thaliana] (TAIR:AT5G39360.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69516.1); contains domain F-box domain (SSF81383) Range:  from: 5012064    to: 5014284    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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