Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <-----------GT1                                  ------>MYB83              <-----------GT1                                 ------->GAMYB     <-----------GT1                                          <---------MYB59    <-----------GT1                                          --------->ANAC46 -------->AHL20(2)                                          -------->P ---------AHL20(2)              ----------->GT1           --------->MYB46(3) --------AHL20(2)           <---------YAB1      --------->ARR11(3)                        --------->AHL20(2) ------->AHL20(2)          --------->AHL20(2)   <---------ARR11(3)                        <---------AHL20(2) ------->AHL20(1)          <---------AHL20(2)   --------->GLK1(2)             --------->MYB52(2)   <- --------AHL20(1)         --------->YAB1       --------->RVE1(1)------>MYB46(1)   --------->At4g35610   atttattttccgattttaaactcttctattttaatagttaaaaaacaaaaaatctagtcatcaacccaacttaattttgtaagttgctgcaattaaacac  5009500                                                                                 --------->ANAC46                                                                                 <---------ALFIN1                                                                                <---------REM1(2)                                                                              <---------ZAT18                                                    <---------ARR14(2)        <---------WRKY38(1)                                                <-----------------AGL2       --------->PCF5                                          --------->ANAC58                --------->ALFIN1                                          --------->ANAC58              <------MYB46(1)                                      --------->ANAC46                  <------MYB83 <---------ZAT2                                      --------->AtLEC2                 --------->MYB46(2)                                      --------->ANAC58          <---------AHL20(2)   --------->At4g35610                                      --------->ANAC58          --------->AHL20(2)   --------->ZAT2<-                                    <---------ALFIN1--------->ARR14(2) --------->MYB111(1)         <- ------TEIL                      <---------PCF5 <-----------------AGL1 --------->MYB59           <---   atacatgtctcgttggcagaactaatgtgaaggctgggccacgcaagcctactaaatctggcccatttaaaattaggtggtccacacagctagacatttc  5009600    <-----------HVH21  ------->MYC3  <-------MYC4  <-------MYC3  ------->MYC4  ------->MYC2  ------->PIF5  <-------MYC2  <-------PIF5 >>>>>>>>>>HY5 --------->ANAC55(2)               <---------AHL20(2) --------->O2                      --------->AHL20(2)                                          <----- <---------TGA1a              <---------AHL20(2)                                               ------ <---------O2                 --------->AHL20(2)                                              <------ --------->TGA1a             --------->AHL20(2)                                            <---------TOE2(3) --------ALFIN1        --------->AHL20(2)                  <------ZmHOX2a(1)        <----------DOF2-- -----------OsbHLH66--------->TOE2(3)<-----------GT1    --------->DAG2              <---------DAG2 <- --------------PIF3(1)--------->AHL20(2)               ---------->DOF2         <-----------GT1-------   cccacgtgtcagacttgtttttcattaaaaaaaaaattttaatctctcattcgaacaaaaaggatttatcgaaaaacaaataaacccttttttaagaaat  5009700                                                                                ----------->GT1          ----------->GT1                                                       <------MYB46(1)         --------->ALFIN1                                                       <------MYB83 --------->LBD16                                                               --------->MYB59 ----ARR14(2)                          ----------->RAV1(1)                   <---------MYB52(1)  ---- --->ARR14(2)    <---------ARR14(2)    ------>MYB46(1)                   --------------->AGL15------- ---GLK1(1)  XXXXXXXXXXXXXXXXXXXX>MIR835-3P                              ============================ ------->At4g35610                     ------>MYB83               --------->GLK1(1)    ---------->DOF2 --------LBD16   --------->ARR14(2) --------->ANAC46        --------->MYB52(1) --------->MYB46(2)---- -->GLK1(1) ----------->GT1 ----------->GT1        --------->MYB52(1)   <-----------------AGL1<------   ctgcggaaaatgtggagaaaatccacaaaaatgaaaaaacccaacaaaaaaaaaaacgaacaaaactgatttcttctctgtttggtatcaaaagagaaac  5009800                  <---------ARR14(2)                  --------->ARR14(2)                 --------->ATERF1(1) ----------->GT1          ---------->DOF2     ----------------->AG    ------------>CBF  ------>ZmHOX2a(1) ----->TOE1(3)   <------NtERF2======================================================================= -->ARR14(2)    <---------ATERF1(1) <---------TOE2(3) ===============================================MADS_MADS                      *TSS    --------->ARR11(3) ----->TOE2(3) <---------ANAC58     --------->DAG2                          --------->ATHB12 ---ARR14(2)   <---------ANAC58   ---------->DOF2          <---------ANAC46--------->ICU4   ctcagaaacaatgaaaggcgtctcctccaaaaaccaaaaaggttaattttgttcttcatttacgtcgaatgctagaaatgatttgggtttatcttgaaac  5009900                 <---------------AGL15                 --------------->AGL15                <-----------------AG                                        --------->CCA1(2)                ----------------->AGL1                                     --------->ARR11(3)      <-                <-----------------AGL1          <-----------GT1     <---------ANAC46              <--               <-------TEIL        ---------->DOF2   --------->AtLEC2<---------MYB46(3)           <--      --------->AtLEC2  ----------->GT1   <---------TOE2(3)       <---------MYB46(3) <---------ANAC58 ================================MADS_MADS<---------TOE1(3)      <---------AtMYB61   <---------ANAC58   gaatagacattcaaagtttcatgaattggtaaacatacaaagctaaggtttttctatgcaaatggtgatggtggatagatatagggttcttgtttagttt  5010000                                 <---------WOX13(1)            <<<<<<<<<<<<<<<<<LFY                                 <---------YAB1              <---------At4g35610                               --------->ATHB12   --------->YAB1                             <---------WOX13(1)--------->ARR14(2) ---------DOF2             --------->ATHB12    <---------ARR14(2) -------ANAC58            <---------YAB1    --------->YAB1   --------->At4g35610    <------ZmHOX2a(1) -------ANAC58       <---------TOE2(3)  <-------TEIL   --------->ICU4           ---------->DOF2 <----   gctttagtctgaaatgtgtttctatggtttgattgattaatgtgcatcatattcgtaatgtttagctacaatggtttttctcaaaaggatagagttttat  5010100                                                                                                -----                                                                                                -----                                                                                                <----                                                                             <---------AHL20(2) <----           <---------ATHB12          <---------TOE2(3)  ------->TEIL        <---------WOX13(1)  <----          --------->ANAC58          <-----------GT1    <---------GLK1(2)    <---------YAB1    <------   ------>ZmHOX2a(1)           <---------YAB1     --------->ATHB12        --------->ATHB12  ---------   --------->LBD16     <----------DOF2           --------->ICU4         <---------WOX13(1)  <-------- -----YAB1--------->ANAC58 <----------DOF2    ---------->ID1          --------->ATHB12  <------ZmHOX2a(1)   gattcctgaatcaagcattctctaactttctttgttattaacatttttgtagttattgaatctctctctggctgattgattaatggctgaggagaccgta  5010200    <---------MYB59 ---->SPL7 -->TEIL                                                                                            < -----TOE1(2)                                  --------->HSFB2a(2)                        <---------ICU4 -----TOE2(2)                                  <---------HSFB2a(2)                       ------>ZmHOX2a(1) ---TEIL                                --------->GLK1(1)                     ---------->DOF2<------- ---SPL7    <---------LBD16             <---------GLK1(1)             --------->ANAC58   ============ ------>AtSPL3         <xxxxxxxxxxxxxxxxxxxsmallRNA(i2)               --------->ANAC46   ============ -------AtSPL3--------->LBD16         <------ZmHOX2a(1)               --------->ANAC58  <---------MYB59   cgtttgcctaattcgccggatgtaaacatatcatggagaaggatttctactggaaaactgagttttttatacactcaagagaaagttgttcctaattatc  5010300     <<<<<<<<<<<<<<<<<LFY     >>>>>>>>>>>>>>>>>LFY   ------>ZmHOX2a(2)  <------ZmHOX2a(2)                  --------->ANAC46  <---------GLK1(1)                  --------->ANAC58  --------->GLK1(1)                  <---------ANAC55(2) <---------ARR11(3)                  --------->ANAC58 --------->ARR11(3)          ----------->GT1 --------->ARR14(3)        <---------ANAC58 <---------AGP1<---------ANAC58      --------->ANAC55(2) --------->ARR14(2)        <---------ANAC58 <---------ARR14(2)        <---------ANAC46   --------->ICU4                 --------->ANAC46 --------->AGP1<---------ANAC58   <---------ARR14(2)           --------->ANAC58 ---------CCA1(2)     <---------YAB1 --------->ANAC55(1)       --------->ANAC46              -------- --ICU4<---------ALFIN1  <---------YAB1     ---------->DOF2    --------->ANAC58     ---------->DOF2 ========HOX2a_HOX2a--------->YAB1--------->ARR14(2)------->TEIL           <---------ALFIN1  <------- =========HOX2a_HOX2a --------->ICU4<---------LBD16 --------->GLK1(2)  --------->GLK1(1)  <--------P   tcagatctcccactggttcttgtcatgatgcttgtaaatacggaaggaaagatgaatctgaagacaagccaagagttccacatcgcaaaagggttagcag  5010400  Previous    Next  AGI:  At5g15430.1    Description:  calmodulin-binding protein-related. similar to calmodulin-binding protein-related [Arabidopsis thaliana] (TAIR:AT5G39380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15046.1); contains InterPro domain Calmodulin-binding, plant (InterPro:IPR012417) Range:  from: 5009879    to: 5011740    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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