Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->YAB1                                            --------->YAB1                                            <---------ICU4                                           <---------ATHB51                                           --------->ICU4                                     <---------ZAT18                 --------->At4g35610 --------->ZAT14               --------->YAB1    <---------------AtSPL8         --------->YAB1          --------------->AtSPL8      --------->WOX13(1)    <---------MYB52(1)<---------YAB1<-------GAMYB                --------->ANAC58    <---------ATHB12     <-------TEIL<---------ZAT14       <---------ANAC58              --------->ANAC58  --------->YAB1 <---------At4g35610 --------->ZAT18       <---------ANAC58    <---------ANAC46   ccaaaaatcattcagaatcatctcacattcgttatatagtacacaattatgaaaatcgatttcgttgctagatgaacgatttcgcatactcaagcgagat  5006500                                                                --------->DAG2                                                            --------->LBD16                 <---------ANAC58                          --------->HSFB2a(2)                 <---------ANAC58                          --------->LBD16  --------->LBD16            ----------->GT1                                <---------HSFB2a(2)         <---------ANAC58                                 <---------HSFB2a(2)                  <-----         <---------AtLEC2                                 <---------ANAC46 <---------LBD16     <-----         <---------ANAC58                                 <---------LBD16 <---------LBD16     <------   <------ZmHOX2a(1)                                      --------->HSFB2a(2)        --------->YAB1 <---------TOE2(3)      --------->At4g35610    ----------->GT1 ---------->DOF2    --------->YAB1   -- --------->ANAC46<---------ANAC46 ----------->GT1        <---------LBD16 <---------LBD16 --------->WOX13(1)   tataaggaattgcatggtgacttgttagctatagaacagttcaaaaaacgagtgaattttccgggaaaagtgtttctcggggaaaaataatcaatctcag  5006600                                                                                   --------->YAB1                                                                                 <---------YAB1        <-----------GT1                                                      ----------->RAV1(1)   <---------ANAC58                                <---------ARR14(2)     --------->ANAC58   <---------ANAC58                                --------->ARR14(2)     --------->ANAC58 ----TOE2(2)                             <---------ANAC55(2)        <---------ANAC58 ----TOE1(2)                             --------->ANAC55(2)        <---------ANAC46               -- -----RAV1(2)                           <-------TEIL  <---------LBD16   ---------->DOF2           --- -------->DOF2             ---------->DOF2     --------->YAB1       <---------ANAC58<---------TOE2(3)   gtaaagcttgtaacctctgggtaaacagcaaaagacacaaaatacatattcagaattcgggagtgttttagcgtgaaagcaccattaatgaacgaatata  5006700                                                                 <---------WOX13(1)                                                               --------->ATHB12                                  --------->TOE1(3)           <---------YAB1                       <---------ANAC46             ----------->HVH21                       ----------->GT1            <---------ANAC58             <---------MYB55(2)       --------->AHL20(2)        ----------->RAV1(2)--------->ALFIN1           --------->MYB46(3) ----------->GT1    <---------ANAC58              <---------ANAC46           --------->ARR14(2) ------->CCA1(2)    <---------ANAC58              <---------ANAC58           <---------ARR14(2) ------>ARR11(1)    <---------ANAC46          --------->ALFIN1--------->ICU4<------ZmHOX2a(1)       -   gatatgaaaaaaaatgggaattgtgtggtataaaaacctgaagatgaagttggggtgagagggcatgattgaaatagaggaaccaccatgggagagggag  5006800                                                                                  ------->TEIL                                                                                  --------->SPL7                                                                                  <-------TEIL                                                                                --------->TOE1(2)                                                                                --------->TOE2(2)                                                                               --------->ANAC55(2)                                                                               <---------ANAC55(2)                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                      <---------ANAC46            ---                                                                      <---------ANAC58           <---                                                                  --------->CCA1(2)              <---                                                                 --------->ARR14(2)              ----                                                                 <---------ARR11(3)--------->ANAC58                                                                 <---------ARR14(2)--------->ANAC58                                                            --------->LBD16   <---------------AtSPL3                    <---------WOX13(1)                     --------->RAP2.6(2)<-------TEIL       ----          <---------AtLEC2                                 --------->ANAC46   --------------->AtSPL3     --------->ARR14(2)                <---------ANAC46 <---------ARR14(2)    --------------->AtSPL8     <---------ARR14(2)              --------->ATHB12   --------->ARR14(2)----------->HVH21     <---- ---------->GT1   --------->ATHB12----------->GT1     ---------->DOF2 <---------ANAC58        <------   agaagaaaatttgcagggagtgattgggagagagaagagtgatttgtatagagaggcaaagccgcaagatttgtgtgtgatacgtacgtctcttagtagg  5006900                              --------->YAB1                       <---------LBD16                     --------->GLK1(2)                                       ----------->HVH21                     <---------ARR14(2)                                     <---------WOX13(1)   *TSS              --------->ARR14(2)                                 --------->LBD16 ----------->GT1    <---------ARR14(2)                                 <---------LBD16 ------>ARR14(1)   <---------HSFC1(2)                               --------->ARR14(2)              < ------ARR14(2)    --------->HSFC1(2)                               ------>MYB83                 <--- ------GLK1(2)     --------->HSFB2a(1)                              <---------ARR14(2)           ---- ----->ARR11(1)    <----------TaMYB80                      --------->YAB1  <------------CBF      ---- ----->ARR14(2)    <---------HSFB2a(1)          <------ZmHOX2a(2)   ------>MYB46(1)        --------->ICU4 --ZmHOX2a(1)     ----------->ARR10            <---------ARR11(3)   --------->MYB52(1)   --------->At4g35610 ---TOE1(2)<<<<<<<<<MYB98--------->LBD16       --------->ARR11(3) <---------MYB59        <---------At4g35610   attcggtttatttgttaggggagattccggtttaataactaaaatcgaagatcgaactaaatcagaaaccgaaccgggattgacaagggggagatgatga  5007000                                                                                       <---------YAB1                                                                                 <------ZmHOX2a(2)                                                                                 ==============HOX2a_HOX2a                                                                                --------->ARR11(3)                                                                                <---------ARR11(3)                                                                            --------->SPL7                                                                           <---------SPL1(1)                             <---------ANAC58                              --------->SPL1(1)    <---------ANAC55(2)      <---------ANAC58                             <---------SPL7<------ZmHOX2a(1)    <---------TGA1a      <---------ANAC58                                 --------->LBD16    --------->O2         <---------ANAC58   ----------->RAV1(1)           <---------SPL1(2)    --------->ANAC55(2)  <---------ANAC46  ----------------->AGL2        <---------ANAC55(2)    <---------O2        <------NtERF2   <-----------TCP11(1)             <---------ANAC46 -----------HVH21       <-----------------------TaNAC69(2)               <---------ANAC58           - ------At4g35610      <---------RAP2.6(2)  ----------------->AGL3        <---------ANAC58        ---- ----->ZAT2        <---------AtMYB61  --------->RAP2.6(3)               --------------->AtSPL3   ---- ----->At4g35610   --------->ALFIN1  --------->MYB52(1)               ------------------>SPL14  -----   gctgtcaagtgtctgagagatgtggtggcttgcttagcaaaacggcccacaaatagacattgaacaaattggattccgtacagatcatgaggattgctac  5007100                                                                               --------------->AGL15                                                                               <----------DOF2                                                                               <---------------AGL15                                                                               <---------DAG2      <-                                           --------->ATHB12                   ----------------->AGL2             <---------ICU4                --------->YAB1                     <-----------------AGL3             <--------HAHB4                <---------ICU4                     <-----------------AGL2         --------->MYB46(3)                -------->ATHB1                     <---------ANAC58    <--       --------->PCF2                     <---------ATHB12                    ----------------->AGL3       ------->TEIL                       --------->ICU4                      <---------ANAC58    --- -------->AHL20(2)                 <---------ANAC46                       <---------ANAC58      ----- ----->TOE1(3)    <---------AHL20(2)      <---------YAB1                  <---------ANAC58  <-------- ----->TOE2(3)    --------->AHL20(2)   ------------>ATHB5               <---------AHL20(2)  --------- ------>GT1 <---------ATHB12   <----------DOF2     <----------DOF2      <-----------GT1 <------ZmHOX2a(1)   gttaaaatggacccatcattttaaatgtaatttctttacgtttaatcattgaacttttagataagtttacaaatttacttgctttatataggaagatgtc  5007200                                         --------->TOE1(2)                                       <---------------AtSPL3                                       <---------------AtSPL8                          <---------DAG2                                       --------------->AtSPL3                          <----------DOF2       --------->ZAT6                  --------------->AtSPL8                     --------->YAB1 --------ICU4               <---------RVE1(1)                                  --------->YAB1 -------YAB1                <---------CCA1(1)                --------->ATHB12 <---------AHL20(2) ------>ICU4               <---------ARR14(2)               <---------YAB1    --------->AHL20(2) ---->YAB1                 <---------ARR11(3)             --------->YAB1    --------->TOE2(3) -ARR11(3)                 --------->ARR11(3)        --------->YAB1   <---------AHL20(2) >ARR11(3)  --------->AHL20(2)  <---------AHL20(2)<-----------GT1     <---------YAB1<-----------GT1 <   ataattctaactctataaatacagtagaagatattttagtgaatgtacgatttaagcatattatcatttgatattattcattaattatacttttttttgt  5007300                                          <---------YAB1                                        --------->ATHB12                                        <---------ICU4                                       <---------YAB1                                     --------->YAB1                                     <---------ICU4                                    --------->ICU4                                        <---------ICU4            --------->AHL20(2)    --------->YAB1                                          --------->ATHB51            --------->YAB1       <---------YAB1                                           <--------ATHB1         --------->YAB1        --------->YAB1                                             --------->ATHB12        --------->AHL20(2)<---------GLK1(2)                                              <---------ATHB12        <---------AHL20(2)--------->ARR11(3)                <---------TOE2(3)            <---------YAB1      --------->TOE2(3)   --------->ARR14(2)      <-------GAMYB                          <---------ATHB51     --------->YAB1       <---------ARR14(2)    ---------->ID1                ------->TEIL-------->ATHB1    <-------TEIL          <---------ARR11(3)  <-----------RAV1(1)      <---------WOX13(1)--------->ICU4 ---------ATHB12     --------->MYB52(1)--------->ICU4 <---------YAB1<---------ZAT6    ------------>ATHB5   caaacattcattaattatacaaataacagattttcatgataatgatttttgtcgttgtcattaacatttactgatagatgtatttgactcaattattgat  5007400  Previous    Next  AGI:  At5g15410.1    Description:  DND1 (DEFENSE NO DEATH 1); calcium channel/ calmodulin binding / cation channel/ cyclic nucleotide binding / inward rectifier potassium channel. Identical to Cyclic nucleotide-gated ion channel 2 (CNGC2) [Arabidopsis Thaliana] (GB:O65718); similar to ATCNGC4 (DEFENSE, NO DEATH 2), calmodulin binding / cation channel/ cyclic nucleotide binding [Arabidopsis thaliana] (TAIR:AT5G54250.2); similar to ATCNGC4 (DEFENSE, NO DEATH 2), calmodulin binding / cation channel/ cyclic nucleotide binding [Arabidopsis thaliana] (TAIR:AT5G54250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15043.1); similar to putative cyclic nucleotide and ca Range:  from: 5003310    to: 5006903    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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