Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <-----------HVH21                                                                                     ------>NtERF2                                                                                    --------->DEAR3(1)                                                                                --------->SPL7                                                                               --------->ARR14(2)                                                                               <---------ARR14(2)                                                    <------NtERF2             <-------GAMYB                                                <---------DEAR3(2)            <---------SPL7                                                <---------MYB46(3)           <---------MYB46(3)   ---                                               <---------DEAR3(1)            <---------DEAR3(2)   <--                                            --------->ANAC58             --------->DAG2     ---------        ------>ZmHOX2a(1)                   ----------->HVH21          ---------->DOF2     ----------       --------->TOE2(3)        <-------TEIL--------->ANAC58        --------->LBD16 <---------DEAR3(1) ------->GLK1(2)           <---------------------WRI1              <---------ANAC55(2)<------NtERF2 - -------ARR14(2)    <---------GLK1(2)<---------SPL7------>NtERF2  <---------LBD16<---------DEAR3(1)-- -------GLK1(2)     --------->ARR14(2)  --------->ANAC58     --------->AHL20(2)<---------MYB52(1) <-- ------>ARR14(2)    <---------ARR14(2)  --------->ANAC58--------->MYB46(3)  <---------DEAR3(1)  <----   gattcttatccttcatcgactggattttcttcgattcgtcgtaagcacgacggtggcaaccgattaaatacgggaaaggcggttcggcgtcggaaaagtc  5002700                                                                                   <---------MYB52(1)                                                                                   <------NtERF2                                                                                 --------->RAP2.6(2)                                                                                --------->SPL7          <------ZmHOX2a(2)                                                    ------>NtERF2 <---------------------WRI1                                                    <---------ATERF1(1) <------NtERF2                                                              <---------At4g35610 ------>ATERF1(1)                                                           --------->At4g35610 -------LBD16                                         <----------DOF2 <-----------ARR10     --------- >DAG2   --------->ARR11(3)                        --------->ARR11(3) --------->GLK1(2)     --------- >DOF2   <---------ARR11(3)                    ---------->DOF2     ----------->ARR10  --------->At4g35610 -------->LBD16                            --------->ANAC58    --------->At4g35610<---------RAP2.6(3) ------->DEAR3(1)                          --------->ANAC58    <---------At4g35610<-----------HVH21 ----NtERF2                              ---------->DOF2<-----------GT1   ---------->CDC5   --------- -----DEAR3(1) --------->YAB1     <---------ATHB12 <---------ARR11(3)<---------GLK1(2)<---------At4g35610   gccggagagacgatctatgagaactctctccatcaaatcacgagaaagcaaaagctctttaccttcgctgagaatctcagcggccgtcatctccaagtaa  5002800                                                                                         <---------TOE1(3)                                                                                     <----------DOF2                                                                                     ----------------                                                                               <------NtERF2                                                                              ------>NtERF2                                                                              <---------ATERF1(1)                                                                              <---------DEAR4(2)                                                                             --------->DEAR3(1)                                                                             <---------ATERF1(2)                                                                             --------->ATERF1(2)                                                        ==================================HOX2a_HOX2a                                                        <------ZmHOX2a(1)    <---------DEAR3(1)                                             --------->ARR14(2)             --------->DEAR3(2)                                <---------ZAT6      --------->LBD16         --------->ATERF1(1)                                ----------->GT1    --------->HSFB2a(2)     --------->ZAT2<---------TOE2(3)                               <---------TOE2(3)   <---------HSFB2a(2)     --------->At4g35610                   <---------MYB52(1)        <-----------ARR10    =========================HOX2a_HOX2a                  <---------At4g35610        <---------ARR11(3)   ------>ZmHOX2a(1) ------>ZmHOX2a(2)                  --------->At4g35610<---------ANAC55(2)===================================HOX2a_HOX2a       <------ZmHOX2a(1)       <---------TOE1(3)   <---------ANAC46        <---------At4g35610  <----   <---------TOE1(1)        <<<<<<<<<MYB98   --------->ARR11(3)   ========================HOX2a_HOX2a   <---------TOE2(1)        <---------MYB52(1)    <---------LBD16--------->TOE2(3) <------ZmHOX2a(2) >ANAC58  ------>ZmHOX2a(2)<-------GAMYB--------->AHL20(2)    --------->ARR14(2)  --------->ARR11(3) >ANAC46<---------ARR14(2)<---------ANAC58  --------->CCA1(1) <---------ARR14(2)  <---------ARR11(3)- >ANAC58--------->ARR14(2)<---------ANAC58  --------->RVE1(1)<---------CCA1(2)--------->LBD16   <----   acaatacgaggatcggaatcagttgattccgttagggttacataaaatatcttccggaggattatatcctcaatttcagccggcgatctttgaggtttgc  5002900   <------NtERF2  ------>NtERF2                  --------->ANAC58 ------->TaNAC69(2)              --------->ANAC58                                                 --- -----ANAC58                     --------->ANAC46                                               ----- --------->ID1          <---------ATHB12                                --------->TOE2(3)     ------- -----ANAC58 <-----------GT1   <<<<<<<<<TAC1      ----------->GT1 <---------AHL20(2) <-----------GT1   tcgtcgccattgattttacgaatcaaatcaaacactcgaaactcgatttgagagataaatataagaattttttttcttaaacttgtattaccgatgaatc  5003000                                      --------->AHL20(1)                                      --------->AHL20(2)                                      <---------AHL20(2)                                      <---------AHL20(1)                                     <---------AHL20(2)                                             -                                     --------->AHL20(2)                                           <--                                 <---------YAB1                                                   ---    ---------->DOF2         <---------TOE2(3)                  ---------->DOF2            --------->CCA1(2) ------->DOF2              ---------->DOF2                   --------->ANAC58      <---------ANAC58 < ---->YAB1                <---------AHL20(2)                 --------->ANAC58      <---------ANAC46 < >TEIL                   --------->AHL20(2)                  --------->ANAC46      <---------ANAC58 -   aaaagcgaaagagtttggacttagcaatttaaagtataattaaatttagaaaaactaaaattcacgaaagaagagagaaaccatggcgagagatttggaa  5003100             <------MYB83             <------MYB46(1)            --------->MYB59           <--------P     <---------HSFB2a(2)     --------->HSFB2a(2)    <---------LBD16 <----------DOF2 -------->HSFB2a(1) -------ARR11(3)                                                    --------->ZAT2 ------>ARR11(3)                                            --------->ANAC58   --------->DAG2 ------- ---------HSFC1(2)                          ----------->HVH21    ------>ZmHOX2a(1)            <------ ---------HSFB2a(1)             <----------DOF2             --------->ANAC58  ---------->DOF2-------- -------->HSFC1(2)          ------->TEIL   *TSS      <----------DOF2<---------ZAT2         <------ZmHOX2a(1)   gaactttctgggagtaggtttttgtttatgaactcttttggagtctctgaacgagctttagcaagtcctgagcttggacaaaaagtctatataggatata  5003200                     <---------O2       <---------SPL7--------->bZIP60(1)                                       <---------AHL20(2)      --------->TOE1(1)                                                        --------->AHL20(2)      --------->TOE2(1) <---------ANAC46                             --------->AHL20(2)     --------------->AtSPL8   <-----------GT1                 --------->YAB1--------->AHL20(2) -->ARR14(2)         --------->O2--------->ICU4      <---------At5g28300   --------->AHL20(2) ---ARR14(2)         <---------bZIP60(1)         <----------DOF2    --------->AHL20(2)    <---------ARR11(3) ->CCA1(2)      --------->MYB52(1)       ------------>CBF     --------->AHL20(2)<---------ICU4     --   tgcaaacgtcgtacttactaacgacgtcgtttatacttattaagacaattacttttactgctaataaaaaataaaaaataaaaaattaccaagataaact  5003300                                                                              ---------->DOF2                      --------->GLK1(2)                                 <---------RVE1(1)                      --------->ARR11(3)                                <---------CCA1(1)         <-----------RAV1(1)                                           <---------ARR11(3)     <---------ARR11(3)                                                <---------GLK1(2)     <---------ARR14(3)                                            ---------->DOF2     --------->ARR14(3)              --------->MYB52(1)          --------->ANAC58       <---------TOE2(3)     <---------GLK1(2)<---------ARR11(3)                         --------->ANAC58       <---------TOE1(3)     --------->ARR11(3)     <----------DOF2                      --------->ANAC46     ---------->DOF2 ---->ZmHOX2a(1)     --------->RVE1(1)  ------->GAMYB    <---------YAB1--------->ARR11(3)----------->GT1   cctccaagattttgttgctcaaaaaatctactttgaacttaaccgtaagaggttgaagtatcattccaagaaagattttttaaagaagtaaaggtaaaca  5003400                        <--------HAHB4                        --------->AHL20(2)                        --------->ATHB12                        -------->ATHB1                   <---------ICU4                        <---------AHL20(2)              <---------YAB1                        <---------ICU4               <---------AHL20(2)                        --------->ATHB51             --------->AHL20(2)                  --------->ANAC58                   <---------YAB1                  --------->ANAC46                <---------DAG2       <---------ARR11(3)             --------->YAB1                       <----------DOF2--------->HSFB2a(2)      <------ZmHOX2a(1)--------->ICU4   <---------AHL20(2)       <---------HSFB2a(2)               <-   <------ZmHOX2a(1)   <---------ATHB51--------->AHL20(2)--------->YAB1--------->ARR11(3)          -- <---------TOE2(3)--------->ANAC58   <-----------------AGL3<---------YAB1                     -------   attgaggaggaacaatgaacacacaattatttggaccgatataaaattggaactttttattattattcgagatgatcatgcggtcgaatggacatgaaca  5003500                       --------->WRKY38(1)                       <---------ZAT14                       --------->ZAT14                       --------->ZAT18                      --------->DOF5.7(2)                 ------->GAMYB                --------->DEAR3(2)                                      --------->DEAR3(1)                <------------AtMYB77                     <------ZmHOX2a(1)           <---------LBD16                --------->MYB46(3)                  <---------ALFIN1 ------->GAMYB  <---------ALFIN1              <---------ARR14(2)                  ----------->RAV1(1)--------->DEAR3(1)         <---------ZAT14                         ----------->HVH21  --------->DEAR3(2)  <-------TEIL--------->MYB52(1) --------->TOE2(3)<-----------HVH21 --------->MYB46(3) --------At4g35610  <---------ANAC46             <---------ETT(1)   <---------MYB55(2)              - ------->At4g35610--------->LBD16--------->TOE1(3)------>NtERF2     <------------AtMYB77     <------- >TEIL   --------->ZAT14     <---------MYB52(1)  --------->ANAC46  --------->SPL7<-----------GT1   --   tagctgcatactgaagtaaccggcgttcactgttaccttcaatgctattctccgacacaggactcatcgaaccgccgatgttttcaccacgggttctttt  5003600  Previous    Next  AGI:  At5g15400.1    Description:  U-box domain-containing protein. similar to UFD2 [synthetic construct] (GB:ABG89128.1); similar to hypothetical protein OsJ_010887 [Oryza sativa (japonica cultivar-group)] (GB:EAZ27404.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15041.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain U box; (InterPro:IPR003613) Range:  from: 4997614    to: 5003143    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g15410.1    Description:  DND1 (DEFENSE NO DEATH 1); calcium channel/ calmodulin binding / cation channel/ cyclic nucleotide binding / inward rectifier potassium channel. Identical to Cyclic nucleotide-gated ion channel 2 (CNGC2) [Arabidopsis Thaliana] (GB:O65718); similar to ATCNGC4 (DEFENSE, NO DEATH 2), calmodulin binding / cation channel/ cyclic nucleotide binding [Arabidopsis thaliana] (TAIR:AT5G54250.2); similar to ATCNGC4 (DEFENSE, NO DEATH 2), calmodulin binding / cation channel/ cyclic nucleotide binding [Arabidopsis thaliana] (TAIR:AT5G54250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15043.1); similar to putative cyclic nucleotide and ca Range:  from: 5003310    to: 5006903    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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