Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <---------MYB46(3)                                                                        <---------ANAC58                                                                        <---------ANAC58                                                                        <---------ANAC46                                                                        <-------GAMYB                                                                       <---------MYB46(3)                                                                       --------->MYB52(2)                                                                       <------MYB83                                                                       <------MYB46(1)                                                                      <---------AtMYB61       <------     --------->YAB1                ----------->HVH21               <-----------RAV1(1)        <------    <---------YAB1               <-------MYC3                   <---------AHL20(2)    <----------DOF2 --------ANAC55(2)               ------->MYC3                  --------->AHL20(2)     ------>ZmHOX2a(1) ------->ANAC55(2)            <---------ALFIN1    <---------------AGL15--------->MYB55(2)     <------ -----TEIL         ----------->GT1 --------->WRKY12            <---------AHL20(2)  ---------->ID1   tacatgatgataatgtggatgtgataaaaacaacacgttgacatgtcgattactatatgagaaaattaaatgttggttgtttcatgtccttttctgcctt  4977100                                                                                            ---------                                                                                            ---------                            <-----------GT1     ----------->GT1                             ------>MYB46(1) <----------DOF2   --------->GLK1(2)        <---------AHL20(2)          ---------->DOF2     --------- ---ANAC58         <---------ARR14(2)       --------->AHL20(2) --------->ANAC46     ---------->DOF2 ---ANAC58         --------->ARR14(2)  --------->YAB1    --------->AHL20(2)  ----------->GT1------>MYB83 ---ANAC46     --------->HSFB2a(2)<---------AHL20(2)   --------->AHL20(2)    --------->RAP2.6(2)   gggctttgcctctctctctcgaatccgatttttcatttttttcatattaattgtgaaaataatataagaaacacaaaagccgaaaaaaaagaccaagcca  4977200                         ------->TEIL                                                   --------->AHL20(2)                 <---------ICU4 ----------->GT1                                         --------->YAB1      <---------ICU4  <---------YAB1                        --------->ARR14(2)  --------->TCP16(1)     --------->ICU4--------->ICU4                    --------->AHL20(2)        <---------TCP16(2)   --------->YAB1<---------AHL20(2)        <---------ARR14(2)  ----------->HVH21--------->PCF5 >ANAC46        --------->AHL20(2)         --------->ARR14(2)--------->CCA1(2)<---------ZAT18 >ANAC58      --------->YAB1    <---------ZAT6       <---------AHL20(2)      --------->ALFIN1 >ANAC58 --------->AHL20(2)--------->YAB1 <------ZmHOX2a(1) <---------ARR14(2)--------->ZAT18   atatttcataatgaaataataaatatgaatcgtagtgataaataggatactatatttatttggatatgacccgttgcaagtggacccaaataatatccca  4977300                                                <---------AHL20(2)                                                <---------AHL20(1)                                                --------->AHL20(1)                                                --------->AHL20(2)                                       --------->YAB1                                      <---------YAB1                                    -------->ATHB1                   <---------ICU4   <---------ICU4                   -------->ATHB1   --------->YAB1                   --------->ATHB12<---------AHL20(2)                   --------->YAB1  --------->AHL20(2)                  --------->ICU4--------->AHL20(1)                  <---------YAB1--------->AHL20(2)                         --------------->AGL15                  <---------ATHB12 --------->ICU4                    <---------GLK1(2)                --------->WOX13(1) <---------ATHB51          <---------AHL20(2)                --------->YAB1  <---------AHL20(2)          --------->AHL20(2)---------->DOF2             --------->YAB1    <---------AHL20(2)        ----------->GT1   <---------------AGL15           <---------ARR11(3)  --------->AHL20(2)        <------ZmHOX2a(1)--------->TOE2(3)   aaatttcagaaacgatattaatcattgagaaaattaaattattatagcaataaaatataggataaaatttggattttcttaaaagagtttttagagatta  4977400                      ===================HOX2a_HOX2a                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                     ====================HOX2a_HOX2a                    <---------ARR11(3)             <------MYB83             <------MYB46(1)                                                        <---------ZAT18            --------->MYB59                                                  --------->YAB1       <--            <---------TOE2(3)                                                <---------ICU4      ----          --------->ICU4           <---------MYB52(1)                       --------->ICU4      <----       --------->AHL20(2)         <----------DOF2                           <---------ATHB12    <----     ----------->GT1<---------AGP1------>ZmHOX2a(1)                     ------------>CBF<---------LBD16    --------->DAG2  --------->ARR11(3)--------->ANAC55(2)          ---------->DOF2  --------->ZAT14   ---------->DOF2  --------->AGP1<---------DAG2                  <---------AHL20(2)<---------ZAT14   ggctaaaaagtaattaggtttagatctatgttagtcctttatgtaatacgagaatataagaggcccatttaaagcccaataatcagtttactcgggttaa  4977500                                                                               <----------DOF2                                                                        <---------ZAT2                                                                        <---------At4g35610                                                                        --------->At4g35610                                                                        <---------HSFB2a(1)                                                                        <---------HSFC1(2)            <---------YAB1                                              --------->HSFC1(2)            <----------ID1                                         --------->ANAC46       <---------ICU4                    *TSS                      --------->ANAC58      --------->ICU4                     --------->ANAC58          <---------ANAC55(2)   --------->AHL20(2)                    --------->ANAC58          --------->ANAC55(2)   <---------AHL20(2)     ------------>CBF  ------->TEIL           --------->ANAC58 ----ZmHOX2a(1)         --------->ZAT18  <---------ANAC55(2)      <---------LBD16--------->ATHB12 ------->GT1<---------ANAC55(2)          --------->ANAC55(2)     --------->MYB52(1)             <---- -----TOE2(3)    --------->DAG2     --------->AtMYB61        <---------TOE2(3) --------------->AGL15 -----TOE1(3)   ---------->DOF2    --------->MYB46(3)<---------AHL20(2) --------->HSFB2a(1)     <----   ggaaaataaatattacgaaaaaggagcgaacaattccaccatcacgaatcgcgatttttttttgagattacggaagcttcgcttgatttgggatttttag  4977600                                                                                --------->At4g35610                                                                                <---------ZAT2                                                                              <---------ALFIN1                                                                             <------NtERF2                                                                             <---------At4g35610                                                                            ----------->RAV1(1)                                                                         ------>NtERF2                                     --------->ATHB12                    --------->LBD16                                ------>MYB46(1)                          <---------ATERF1(1)                                ------>MYB83                  <---------ARR11(3)--------->ZAT2           --------->LBD16     --------->MYB52(1) --------->ANAC58      --------->ANAC46    <----------DOF2            ----------->RAV1(1)--------->ANAC58     <---------LBD16        <------ -----TOE2(3)                 --------->AtMYB61----------->TGA1  <----------DOF2<---------At4g35610 -----TOE1(3)          --------->LBD16   ----------->HVH21  --------->LBD16 ------>NtERF2    --------   ggttttctttctccgaagacgactccgagagaccaacagtgatttgacaatgacgctacctccaggtctttactccggcaccagctctcttgctctggta  4977700                                                                                                    -                                                                                                  <--                                   <---------ARR14(2)                                             ---                        ------>ZmHOX2a(2)                                                         ---                      --------->ARR14(2)                                                        <----                      <---------AGP1 <-------TEIL<----------DOF2                             --------               <---------ARR14(2)  <---------GLK1(2)                                        ---------  <---------CCA1(2)<---------HSFB2a(2)        <-----------GT1                               <--------  <---------At4g35610 <---------ARR14(2)<---------MYB52(1)                             <----------DOF2 ---MYB52(1)   <---------GLK1(2)   --------->ARR14(2)                                 <---------ANAC58 --->GT1       --------->ARR14(2)----------->ARR10     ---------->DOF2                <---------ANAC58   attcatctctctaatcggattctcgatctgtagcacagattcgttttttttcttttgtaaagagtttgtgtgattcaacgagtctattgcttcaatgatc  4977800      <-------PIF5      ------->MYC2      ------->MYC3      <-------MYC3      <-------MYC2   <---------ANAC46       <------MYB46(1)   <---------ANAC58       <---------ANAC58   <---------ANAC58       <---------ANAC58  <------NtERF2           <------MYB83 <---------MYB46(3)      <---------MYB46(3) -------->ALFIN1         <------MYB46(1) -------O2               <------MYB83 ------>ZAT2             --------->MYB59                       <---------TOE1(3) ------>At4g35610       --------->ALFIN1                <---------ARR11(3) -------RAV1(2)        <<<<<<<<<MYB98            --------->At4g35610                    ------------- ->YAB1                <--------P                <---------At4g35610                    <---------ANAC58 >ICU4------->PIF5    <-------GAMYB           ---------->DOF2  <---------TOE2(3)        <---------ANAC58 -ATHB12        <----------DOF2<---------ANAC46 ------->TEIL------>ZmHOX2a(1)--------->TOE2(3)   aggtggctcgtgcttcggcttttgggttgggtctcgtctatgggaacatgaagctcaaggtccttaaggtcatattctatctcaattttgtcttgttttt  4977900                                                    <---------YAB1                                                    <---------WOX13(1)                                                  --------->ATHB12                        --------->ARR14(2)       --------->ICU4                        <---------ARR14(2)   <---------YAB1                        <---------ARR11(1)   --------->AHL20(1)                        ------->TEIL         <---------AHL20(2)                       <---------CCA1(2)    --------->YAB1                   <---------ANAC58         --------->AHL20(2)                   <---------ANAC46        <---------ATHB51             --------->AHL20(1)            <---------ATHB12                                        <-             <---------AHL20(1)    --------->ARR14(2)    <---------AHL20(2)   <---------MYB46(3)   <-             <---------AHL20(2)    <---------ARR14(2)  <---------TOE2(3)     <---------YAB1    ------            --------->AHL20(2)  <---------YAB1   <---------YAB1         ----------->RAV1(2)    <----- -------->WRI1     <---------ANAC58------->TEIL<---------ICU4      --------->YAB1----------->GT1   <-   atcgaaattgttgattatattgctcgtatctgctatgaatctgcaataatattgattaatgaattgttttcatcatctggtgattgtaacatttgaattg  4978000  Previous    Next  AGI:  At5g15320.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01130.1); similar to unknown [Populus trichocarpa] (GB:ABK94588.1) Range:  from: 4977541    to: 4978897    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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