Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---               <---------YAB1                                                                    <---            --------->AHL20(2)                    --------->ANAC58                              -----     <---------WOX13(1)                  ---------->DOF2   --------->YAB1                    ------->TEIL   --------->ATHB12        <---------CCA1(2)      --------->ANAC58---------->DOF2       --------->YAB1   aaaactgattgagttttaatattgtttctatatccaaactgaacaaagaaacaagacaaaatcaaaacaaaagatggacacaaatatcaaacatgaaccg  4957900                      --------->AHL20(2)                     --------->At4g35610                   <-                      <---------AHL20(2)                     --------->ZAT2                      ----    ----------->GT1   <---------AHL20(1)--------->ETT(2)  <---------At4g35610                   ----- -------->HVH21<------MYB83--------->YAB1               <-----------GT1            <---------AHL20(2) --------HVH21 <------MYB46(1) ---------->DOF2        <-----------HVH21     ----------->GT1---------- ------>GT1<---------REM1(1) <---------YAB1     <-----------GT1            <---------TOE2(3) <-------   gtgacattgtaaaatgtaggttattttatttataaaagatggtagacattttacaatgtcaccagctctaagaaaacaaggttattttttttaaaaagaa  4958000                                   --------->AHL20(2)                                   <---------AHL20(2)                                  <---------AHL20(2)                                  --------->AHL20(2)                                  <---------AHL20(1)                               --------->AHL20(1)     ----------->GT1           <---------AHL20(2)     <----------ID1            --------->AHL20(2)   ---------->DOF2        --------->AHL20(2)                     --------->MYB52(1)                 - ---------ID1             <---------AHL20(2)                <---------YAB1                          < ------>DOF2          <---------AHL20(2)                --------->AHL20(2)                          - ------------------->ANAC81<---------AHL20(2)         --------->AHL20(2)                  <---------AHL20(2) >DOF2         ----------->GT1<---------AHL20(2)   --------->AHL20(2)                  --------->AHL20(1) ---ID1      ---------->DOF2  --------->AHL20(2)--------->YAB1 <---------WOX13(1)      <---------AHL20(1)   aaagaaaaagaaaaacaaagttatttgattaaataatttaatttacataaacataaaataatatgattaacagaaaaattcacaactaatattttttttg  4958100               <---------TOE2(3)             <---------AHL20(2)          --------->AHL20(2)                                  <---------AHL20(2)          <---------AHL20(2)                                  --------->AHL20(2)         <---------AHL20(1)                                --------->AHL20(1)         --------->AHL20(2)                        --------->ICU4                      ---------->DOF2         --------->AHL20(1)                     <---------AHL20(2)                    <---------AHL20(2)         <---------AHL20(2)                    --------->AHL20(2)                    <---------AHL20(2)        <---------AHL20(2)           --------->ARR11(3)    <---------AHL20(1)    <---------AHL20(2)        --------->AHL20(2)   <---------YAB1    <---------AHL20(1)                --------->AHL20(2)    <---------AHL20(2)  <---------AHL20(1)     <---------AHL20(2)            <---------YAB1    --------->AHL20(2)  --------->AHL20(1)     --------->AHL20(1)            --------->ICU4 --------- -------->ATHB51<---------YAB1       <---------ARR11(3) --------->AHL20(2)  <---------TOE2(3) ---------AHL20(2)     --------->AHL20(2)<-----------GT1--------->YAB1     --------->MYB52(1) -------->AHL20(2)<<<<<<<<<MYB98    <<<<<<<<<RAP2.2<---------YAB1  ---------->DOF2<---------AHL20(2)   aattatttaaattaatttatgttaaatatatatgatttagatattacaatataatgaataatatttttttaaagaaataacgattaatttaaagtgattt  4958200                                                                                           --------->AHL20(2)                                                                                           --------->YAB1                                              --------->AHL20(2)                         --------->AHL20(2)                                              <---------YAB1                            --------->YAB1                                              <---------AHL20(2)                      --------->AHL20(2)                                        ------------>CBF                            <<<<<<<<<MYB98                                  ------>ZmHOX2a(2)    <----------DOF2             ----------->GT1                                <---------ARR11(3)   <---------YAB1               ----------->GT1                                --------->ARR11(3)<---------AHL20(2)             --------->AHL20(1)       <---------AHL20(2) --------->ATHB12   <---------AHL20(1)             <---------AHL20(2) --------->YAB1        --------->ANAC55(2)   --------->AHL20(2)             --------->AHL20(2)      < >ATHB12               <---------ANAC55(2)   --------->AHL20(1)            <---------AHL20(2)       <   gaatcatatttttttttgggacatcaagtgatttgatcttaacccaatataatttatctttgatatcgaaaccatattttaaatatgttaaaataatatt  4958300                                                                                      <---------ARR14(2)     <---------AHL20(2)                                                               --------->ARR14(2)    --------->AHL20(2)                                                             <---------ALFIN1    <---------AHL20(2)                                                            --------->LBD16    <---------AHL20(1)                  *TSS        ---------->CDC5              --------->ANAC46 --------->YAB1     <---------------AGL15        --------->At4g35610      <---------ICU4 <--------HAHB4    ------------>CBF    ----------->RAV1(1)               <---------YAB1 ---------AHL20(2) ----------------->AGL3        <---------At4g35610     --------->ICU4   --------->LBD16 ---------YAB1--------->YAB1          --------->MYB46(3)        XXXXXXXXXXXXXXXXXXXX>MIR2111A*   ctataattaatttcattcatagccaatagaagttagaacaacaacagattaagctcagggcaaaccctagaaatactgattacccccaaatccgaagaaa  4958400                             <---------DAG2             --------->GLK1(1)      <----------DOF2            --------->ARR11(3)      =========================bZIP_DOF            <---------ARR11(3)   <-----------GT1       --------->HSFB2a(2)   <----------DOF2       --------->O2                            ------>ZmHOX2a(1)       <---------HSFB2a(2)   ================================bZIP_DOF               <---------ATHB12   <---------ANAC58       ------>ZmHOX2a(1)        --------->TGA1a          --------->GLK1(2)   <---------ANAC46 <---------HSFB2a(1)   ------>ZmHOX2a(1)                --------->ARR14(2)   <---------ANAC58 --------->HSFB2a(1)  --------->TOE2(3)                 <---------GLK1(2)   cgatttcgtctggagatatcaaaggttcctacttttctcttttcctaaatccaacgtctctgagattgttgttatcggaatctctaatcgttcctatatt  4958500                                                                                          ------>ZmHOX2a(2)                                                                                        --------->ARR14(2)                                                                                        <---------ARR14(2)                                       --------->MYB52(2)                               --------->ARR11(3)                                  <----------DOF2                                       <---------ARR11(3)                                 <---------ANAC46                                       <---------AGP1                                 <---------ANAC58                                      <---------CCA1(2)                              <---------MYB52(1)                                     <---------HSFB2a(2)                             <-------GAMYB                                           --------->HSFB2a(2)                            <---------ANAC58                     ----------------------->TaNAC69(2)                            <---------ANAC58                 --------->LBD16         --------->LBD16                            --------->MYB52(2)         <---------GLK1(1)             ------>ZmHOX2a(1)                       --------->MYB52(2)     <---------WOX13(1)--------->GLK1(1)   <---------LBD16             <---------At4g35610 <---------ANAC58     <---------ZAT6               ----------->RAV1(2)   gttgttctcagttttagctactcgatagtttcgttgcttgttcgtttgatagactagagttcccagagttctaatttgatatgtctcctggatcttctta  4958600                                                            <---------AHL20(2)                                                          --------------->AGL15                                          <---------At4g35610                 <-----------RAV1(2)                                          --------->At4g35610  <---------WOX13(1)              <---------TOE2(3)           <---------ZAT2  <---------------AGL15     --------->ALFIN1         --------->ATHB12                 --------->ZAT2  <----------DOF2 --------->ARR11(3)   <-----       <---------WOX13(1)       ------->TEIL --------->At4g35610 ----------->GT1<---------At4g35610 <     --------->ATHB12      <---------At4g35610      --------->ARR14(2)    <---------ARR11(3)<--------    <---------AHL20(2)     --------->At4g35610   --------->REM1(1)    ---------->DOF2   <---------GLK1(1)    <---------YAB1   <---------YAB1     --------->ZAT18  <-----------------AGL3 --------->At4g35610 -   gaaaatttgattgatttagatttatgcttagctgaatctttgtgagctgctacatttctgctttaattggttaaaagaactcagatgtggagttctgatt  4958700                     --------->ANAC58        --------->LBD16              --------->ATHB12             <---------LBD16   <---------LBD16     <---------AHL20(2)                    <---------At4g35610 --------->LBD16    --------->AHL20(2)          ----------->HVH21            <---------At4g35610    <---------AHL20(2)       --------->ARR14(2)       <---------GLK1(2) <---------ZAT6 ----WOX13(1)<---------YAB1  <---------ARR14(2) <------ZmHOX2a(2) <------ZmHOX2a(2) ---------AHL20(2)   --------->ANAC58    <-----------GT1   <-----------GT1 -YAB1      <-----------GT1  <---------GLK1(2)<---------ARR14(1)<---------ARR14(1)        --------->ARR11(3) -------->AHL20(2)   --------->ANAC46  <-----------HVH21 <-----------HVH21          ---------->DOF2--   gtttaattttatattttcattgcaagctacagatttgacaatgtcaccggatcatagaatgtcaccggatcatagagatagccatagaaagaggtctcgt  4958800  Previous    Next  AGI:  At5g15270.1    Description:  KH domain-containing protein. similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G14170.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO15006.1); contains InterPro domain K Homology; (InterPro:IPR004087); contains InterPro domain K Homology, type 1; (InterPro:IPR004088) Range:  from: 4958340    to: 4962011    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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