Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              ------>ZmHOX2a(2)                                        <---------YAB1                                        --------->ICU4                                      --------->YAB1                              <------ZmHOX2a(2)                                      <---------ICU4                             --------->AGP1   <--                                     --------->ICU4                              --------->ARR14(2)                                   --------->YAB1                                <---------ARR14(2) <                                  <---------YAB1                           --------->WOX13(1)     ---         --------->YAB1       <----------DOF2  <------ZmHOX2a(2)     <----------DOF2             <---   tagccctagaatcaaaaacataaaaatcgaaactttataatcatgatcgatcaaacacataaaaatcgaaactttataaatcagatcgagtttaagagag  4954500                                                                        --------->YAB1             --------->ATHB12                             --------->ANAC58            <---------YAB1                                --------->ANAC46         ------->TEIL                                     --------->ANAC58 --------->HSFB2a(2)            <-------TEIL             ----------------->AG <---------HSFB2a(2)         <---------ANAC58            ----------------->AGL1                 ----- -------ARR14(2)             <---------ANAC58           <-----------------AGL1              --------- ---------LBD16    --------->ARR14(2)                  ------->TEIL    ----------->GT1    <------ZmHOX2a(2) ------>GLK1(2)    <---------ARR14(2)          <---------ATHB12 ----------->GT1          --------->AGP1 ------GLK1(2) <---------WOX13(1)         ------>ZmHOX2a(2)  --------->MYB52(1)         --------->At4g35610   attctggaatgaacctgattggatttggattgggttcaatctgatcgaaatcaattgaacccgaaacgggaaaatgaaaattgcgaaatcagatcaatcc  4954600                         --------->ZAT2         --------->ARR11(3)                                        <---------At4g35610         <---------ARR11(3)             <---------ARR11(3)         --------->At4g35610        --------->GLK1(1)<---------ZAT2 <-----------ARR10         --------->GLK1(2)               ---        <---------GLK1(1)<---------At4g35610      --------->ARR14(2)                              <-- ---->WOX13(1)           --------->At4g35610      <---------ARR14(2)                             ---- >WOX13(1)           <-----------HVH21  --------->GLK1(2)     <------ZmHOX2a(1)  --------->ALFIN1----   atcaaatgagaaatcttcaaacttgtcagcttcccaattcaaaatctaatcgaatttggacgaaggagaagctgaatcgagatgtggagaagtcgaaaac  4954700           ---------->DOF2                                   --------->GLK1(2)       <-------GAMYB                                        <---------GLK1(1) ------>DOF5.7(2)                                           --------->GLK1(1)                  ------ -------MYB52(1)                                       <------ZmHOX2a(1)                   <--------- ----->TOE2(3)               ----------->GT1         <---------TOE2(3)                     ---------- ----->TOE1(3)             ------->TEIL      <------ZmHOX2a(1)       --------->ALFIN1   ---------->DOF2   gttagcgagggttgaaagtagagaacatgaaccgtagaaatgaaacaggacgaataaggaagaaatctggagtttgggaattgtatatgtaaaaggaaaa  4954800                              <---------YAB1                              --------->ICU4                                              <---------ANAC46                            --------->YAB1                                                <---------bZIP60(2)                            -------->HAHB4              ---------->ID1                    <---------ANAC58                            <---------ICU4          <---------ANAC58                      <---------ANAC58                           <---------YAB1           <---------ANAC58                 <---------ANAC46                           --------->ICU4       <---------At4g35610                  <---------ANAC58                         --------->YAB1         --------->At4g35610                  <---------ANAC58    ------>ZmHOX2a(2)    <---------ICU4         <---------ZAT2  <---------At5g28300------>ZmHOX2a(2)  --------->ARR11(3)    --------->ICU4         ------->TEIL    <-----------GT1   <---------ARR11(3) --->ICU4             --------->YAB1        <---------YAB1  <----------DOF2      --------->ARR11(3) -ID1                <---------YAB1      --------->ICU4 <---------CCA1(2)<---------ARR14(2) ->GT1            --------->ICU4  <---------MYB46(3)<---------ANAC46     --------->ARR14(2)   attagatcgtgttcgtcaacatgatgataatgatgatggtttgattatgaagctgcttgtctcttttacggtccaaattcgatgatctcgtgtcgtgtaa  4954900                               <---------ANAC55(2)                         <---------TOE2(3)                    <<<<<<<<CAMTA3                  --------->ANAC58         ----------->GT1          <---------ANAC46                  --------->ANAC46         <---------ZAT6          <-------TEIL                  --------->ANAC58     <---------At4g35610      <---------MYB46(3)                <---------ALFIN1   *TSS--------->At4g35610  --------->ATHB12            <-----------HVH21  <---------ANAC55(1)         <---------ATHB12                 ---------           --------->ANAC58    <---------ANAC46        ------------>CBF          ------->TEIL           --------->ANAC58    --------->ANAC55(2)--------->AHL20(2)<---------ANAC58 ------->TEIL           --------->ANAC46<---------GLK1(2)      <---------AHL20(2)<---------ANAC58<---------CCA1(2)   gaaggaagagagcaagtcacacgcgtttagattatgtgttgagcagagttaataaaactcaatgaatggttcgtgcataggtgtatgtatctccatgacc  4955000              --------->TOE2(3)            <---------YAB1            <---------TOE2(3)      <---------AHL20(2)      <---------YAB1   --------->AHL20(2)                        <---------LBD16   <---------AHL20(2)                       <---------ANAC58  <---------AHL20(2)                        <---------ANAC46  --------->AHL20(2)             <----------DOF2 <---------PCF2                                     <  <---------AHL20(1)    <----------DOF2     <---------ANAC58                                       -- -->HVH21  <-----------GT1   <---------GLK1(2)   <-----------HVH21             <----------DOF2    ---   ctaatttttttattaacattaatacactttagatactttggtgatttcgtgggtcactactactctagtcactagacttctctttctctaggcttcatta  4955100            <---------AHL20(2)            --------->AHL20(2)            <---------AHL20(1)         <---------AHL20(2)       <---------AHL20(2)    --------->AHL20(1)    <---------AHL20(1)    <---------AHL20(2)                                      ----------->RAV1(1)    --------->AHL20(2)                                   --------->ANAC58   --------->AHL20(2)                              <---------ANAC46  --------->DAG2   --------->YAB1                                  <---------YAB1  ---------->DOF2  <---------YAB1                             --------->AHL20(2) --------->ANAC58 --------->AHL20(2)         ---------->ID1 ----------->GT1 <----------ID1 ---------ICU4         <----------DOF2   ---------->DOF2 --------->ANAC58   --------->ANAC58 ------->ICU4      <-----------GT1   ----------->HVH21   --------->ANAC46   --------->ANAC58 ------>TOE2(3)<---------YAB1   <----------DOF2 --------->ICU4  --------->ANAC58  <---------YAB1   cattattatattattttatttttagcttttggctcttttctgacaaagtaattacgagtaagcaacaagaaaaggcccaagcctatgaatgaagcccaat  4955200                                    --------->ZAT2                                    <---------ZAT2                                   --------->ANAC58                            --------->ETT(1)                            <---------DREB2C(2)                            <---------RAP2.3(3)                            <---------DEAR3(1)                            <---------RAP2.6(2)                           --------->RAP2.6(3)                 <----------DOF2   --------->ANAC58             <---------ANAC58 <------NtERF2                                                       ---             <---------ANAC58<---------DEAR3(2)                    <----------DOF2    <---------MYB46(3)        <---------AtLEC2  <-----------HVH21          <---------ARR14(2)             --------->LBD16   <---------ICU4--------------------->WRI1          --------->ARR14(2)            <---------ANAC46  <---------ATHB12       <-----------RAV1(1)        <------ZmHOX2a(1)       ---------->DOF2  --------   ttcaatctttgcattgcttctttgtttgtgtcggcccaagctaagagcctaagaggaaacacctagagtctttagttctaaagagccgtagttgggaaag  4955300                                                                  --------->ZAT18                                                                  <---------ZAT18                                                                  <---------ZAT14                                                                  --------->ZAT14                                 ============================HOX2a_HOX2a                                 <------ZmHOX2a(2)            <-----------GT1                        <---------ZAT14                  --------->ICU4                    <---------CCA1(2)                     <---------ANAC58                    <---------ATHB12            --------->ANAC58                     <---------ANAC58                    <---------YAB1              --------->ANAC58      --------->TOE2(3) --------->ZAT18               ------>ZmHOX2a(1)              --------->ANAC46 -------->GT1        <---------ANAC46                 --------->ICU4               ---------->DOF2 -->DOF2  <------------------------ANAC81  ---------->DOF2--------->ATHB12<---------------AtSPL8<----   aagaaaaacctcatttttagtttgcttgcactgcgatcatccgttcaaagccggtcctaatgatttactggactacatagtacatacaagcccatagctt  4955400  Previous    Next  AGI:  At5g15260.1    Description:  structural constituent of ribosome. similar to structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT3G01170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14999.1); contains InterPro domain Ribosomal protein L34e; (InterPro:IPR008195) Range:  from: 4953443    to: 4954935    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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