Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <---------ANAC58                                     <------MYB83                                     <------MYB46(1)                                    <---------------AtSPL8                                    --------->MYB59                               ---------->DOF2                                 --------->ARR14(2)                   --------->ANAC58       ================================HOX2a_HOX2a                    --------->ANAC46       ------>ZmHOX2a(2)         <---------ARR14(2)                   --------->ANAC58 ---->YAB1                ---------->DOF2<---------ANAC58  <---------ANAC55(2) --------->TOE1(3) ----YAB1    --------->ZAT14    <------ZmHOX2a(1)      <-----------HVH21       --------->TOE2(3)<----   aaaatttgatccctcttcagtcttcaccgaaagaggatttggtacttgcattctctctatcacctaagttaaacgccctaacattaaagtggaaaacttc  4947300                                                              --------->ANAC46                                                         <<<<<<<ZML2                                                      <---------HSFB2a(2)                                                      --------->HSFB2a(2)                <---------ANAC58                                                      --------->HSFC1(1)                 <---------ANAC46                                                <---------AHL20(2)                       <---------ANAC58                                                --------->AHL20(2)         <---------ATHB51                      ------>MYB83             --------->AHL20(2)       --------------->AGL15                      ------>MYB46(1)        --------->TOE2(3)--------->ANAC58      <---------ARR14(2)                      -------->P             --------->TOE1(3)--------->ANAC58<---------TOE2(3)                     ------>ZmHOX2a(1)     <---------TOE2(3)----------->RAV1(1)  <--------P       <--          <-----------GT1                ------->GAMYB<---------HSFC1(1)============================= -----ANAC46<-----------GT1             <---------MYB52(2) --------->MYB46(3) <---------YAB1      ---   gtggagttttattttctctcttcctaccaattttcttatacaactaacattaaattctagaaccacacaaatcgcaaattatggtagatttgtgtgtaag  4947400              <---------------AGL15           <-----------GT1                                                               --------->TOE2(3)        <---------AHL20(2)                                                              <---------ICU4       <---------AHL20(2)                                                     ----------->GT1       <---------AHL20(1)                                                   <---------WOX13(1)       --------->AHL20(2)       --------->AHL20(2)               --------->ANAC46    --------->YAB1   <---------YAB1  ---------->DOF2                    <-----------GT1    <---------AHL20(2)        <- -------MYB46(3)  <---------AHL20(2)              --------->HSFB2a(2)    --------->AHL20(2) <-------- =============================MADS_MADS           <---------HSFB2a(2)   --------->AHL20(2) --------->AHL20(2) -------->GT1 --------------->AGL15     --------->WOX13(1)      --------->LBD16 --------->WRKY18(1)--   tggttataatttttttctatataaagagttgcacttaaatttcaattagtttctaaaaaccccatccacgaatatttaattggtcaataaacattaaata  4947500                                                                          <---------TOE2(3)                                                                       <---------WOX13(1)                                                                      <------------CBF                                                                     <---------ICU4                                                                     --------->ATHB12                                                                     --------->ATHB51                    <---------ANAC58                                 <--------ATHB1                    <---------ANAC58        <---------ARR14(2)       -------->HAHB4         <--------           --------->ANAC58    --------->YAB1                       --------->ICU4         --------->WRKY38(1)           --------->ANAC46 <---------GLK1(1)                       <---------ATHB51       --------->WRKY12         <---------ALFIN1  <---------ARR11(3)                       <---------YAB1--------->AHL20(2)    <---------At4g35610--------->REM1(2)    --------->ARR14(2)      <---------ATHB12     <----------- --------GLK1(1)    <---------ANAC46   <---------AtLEC2           --------->YAB1  <---------AHL20(2) -AHL20(2) --------->ANAC58--------->ARR11(3)                --------->At4g35610 <---------AHL20(2) ------->GLK1(1)  --------->ARR11(3)  <-------TEIL           <---------At4g35610 --------->AHL20(2)   gaattccactgccacgctaatatcgtgtagatatcatatgtgcatggatactgcataaaaatcagctctaataattgatgtaatttaaaaacattgaccc  4947600                            <----------DOF2                      <------------CBF                    --------->AHL20(1)                    <---------AHL20(1)                    --------->ARR11(3)                   ----------->TBP                   <---------AHL20(2)                 ----------->TBP            <------------CBF -WRKY18(1) --------->ZAT6 --------------->AGL15                                                  --- -CBF     <-----------GT1  <---------DAG2<----------DOF2              *TSS               <---------CCA1(2)   tagtaaatgtattaacactatatatattgccttttgagggtttctttattgtttacttccaagttccaacttctctctatctatttccttcgtctctcga  4947700                                                                                                  <--                                                                                      --------->ETT(1)                                                                                    <-----------HVH21                                      --------->At4g35610                        <---------ANAC55(2)-                            --------->GLK1(1)                                    --------->ANAC55(2)-                   ---------->ID1  ---------->DOF2                          <---------ICU4        <--     <---------CCA1(2)      <---------GLK1(1) ---------->DOF2              --------->ICU4 ------>NtERF2 --->ZmHOX2a(2)<----------DOF2   ---------->DOF2                      <------ZmHOX2a(1) <------NtERF2   tctctccgtctctctctctttgtctcttcgatatccaaagagcagagtcaaagactaaacaagtatgagcgaggacaaagattacatgtcggagccattt  4947800                                    <---------ICU4                                   --------->ICU4                         --------->ATHB12                         <---------ICU4              <---------YAB1       <---------YAB1              --------->ICU4   <---------WOX13(1)             <---------TOE2(3)<---------ANAC46            --------->YAB1    <---------ANAC58          <---------WOX13(1)  <---------ANAC58                                                 <----- -------TOE2(3)          --------->YAB1                                                   <---------DOF5.7(2) -------->TOE2(3)        -------->ATHB1--------->YAB1                                   --------->DOF5.7(2) -------->TOE1(3)       <---------YAB1<---------YAB1                                   <----------DOF2 -------TOE1(3)        --------->GLK1(2) <---------YAB1       <----------DOF2    <---------AtLEC2   atcgttaagaagattgatgatgaagaatcattgcttgatgattataatccacagggcaatacttctttctccaagacttgtttccatggcattaacgcct  4947900                                                        <---------WOX13(1)                                                      --------->ATHB12                                                     <---------YAB1                                                   <---------ANAC46                                                   --------->ANAC55(2)      <---------AHL20(2)                                                   <---------ANAC58        --------->AHL20(2)              ------>ZmHOX2a(1)                <XXXXXXXXXXXXXXXXXXXXMIR420<---------WOX13(1)      <---------AHL20(2)                    <---------YAB1       ---------->ID1              <-------  ----------->GT1   <<<<<<<<<TBF1   <-----------GT1<---------ANAC58<----------DOF2 <---------ALFIN1 ----DAG2 <-----------GT1<----------DOF2   <-----------GT1      <-----------GT1 <-----------GT1   tatcaggtttaatttcctcttcttcttctttttttttttttctattttcattttcgtgattgattttttctttttgatttattcaccacttcttcttatc  4948000                         --------->CCA1(2)                         <------ZmHOX2a(2)                        <---------ARR14(2)                        --------->ARR14(2)                        --------->AGP1                        <---------ARR11(3)                        --------->ARR11(3)                      <---------HSFB2a(1)                      --------->HSFB2a(1)                        --------->TOE2(3)                    ---------->DOF2                              --------->YAB1                --------->LBD16                                --------->ARR11(3)                ----                <---------LBD16                                <---------ARR11(3)                <---               <---------O2                                   <---------CCA1(2)                 <----               <---------ANAC46                 --------->ARR14(2)                   ----------->GT1              <---------LBD16                   <---------ARR14(2)                  <---------HSFB2a(2)             --------->MYB52(1)             <-----------------AGL3                  --------->HSFB2a(2) --CCA1(2)  ----------->HVH21        <---------AtLEC2     <------ZmHOX2a(1)      --------->GLK1(2)   tccaaactccataactcacggggaaagatccaactcttagcatgtccacatatatggataggatatatcttaattttcaaaataatctagaaaaaactat  4948100                                                                               <---------ANAC58        --------------->AtSPL8                                                 <---------ANAC46        <---------------AtSPL8                                                 <---------ANAC58    <----------DOF2                                                          <------MYB83    <---------DAG2             ------->TEIL            <----------DOF2       <------MYB46(1) ----->YAB1                   <---------AtLEC2      <-----------GT1        <---------WOX13(1) -----HAHB4                  <-------TEIL       <----------DOF2 <---------CCA1(2)               ----- -----YAB1     <---------AHL20(2)      <-----------GT1 <---------DAG2    --------->ATHB12     ------>ZmHOX2a(1)   aattagctttattgtacttaatttctatagatgcatgtttttaactcaagcttttgactttatcttgtatcatctagattggtgtgtatttcaatcctac  4948200  Previous    Next  AGI:  At5g15240.1    Description:  amino acid transporter family protein. similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT3G28960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14970.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 4947670    to: 4950343    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version