Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->MYB46(3)                    --------->ANAC58                    --------->ANAC46                    --------->ANAC58                 --------->MYB46(3)       <-----------GT1                --------->ANAC58 --------->RAP2.6(2)                --------->ANAC58 ----------->RAV1(1)            --------->ANAC58    <----------ID1            ------>MYB46(1)   --------->ANAC46            --------->AtLEC2  --------->ANAC58                         --------->YAB1            --------->ANAC58  --------->ANAC58                     <---------AHL20(2)            --------->ANAC46---------->DOF2                       --------->AHL20(2)            ------>MYB83   <---------AHL20(2)  <---------DAG2  <---------HSFB2a(2)       --------->ANAC46   --------->AHL20(2)   <----------DOF2 --------->HSFB2a(2)  --------->ARR11(3)   attgtcttcccaccaagcaagcacccaatttaaagccacaaaataaaccctttttcattttccttctataaaatcgtagttagatggatattgagtttta  4944500                       <-----------GT1                  <---------AHL20(1)                  --------->ARR11(3)                        <------ZmHOX2a(1)                  <---------ARR11(3)        --------------->AtSPL8                    ------>ZmHOX2a(1)                  --------->AHL20(1)        <---------------AtSPL8            <---------ARR14(2) <---               --------->AHL20(2)   ------->TEIL           ----------->GT1--------->At4g35610   -----   gtttggcatttcttagttaaaatattcaccctaaaatgaatctaaaaatgtacaaaatcacaggaaaataaaactaagcagaaatgtcctaagaaaacta  4944600                                      <---------ZAT6                         --------->ARR14(2)                         --------->ARR11(3)                         <---------ARR14(2)  --------->ANAC46         --------->YAB1  <---------ARR11(3)  --------->ANAC58 ------TOE2(3)           <---------GLK1(2)   --------->ANAC58            <-------TEIL ----->DOF2        ---------->DOF2    ----------->GT1         --------->YAB1       <---------AHL20(2)   aagtttttaaaaaataatcttcaaagagatactccaactggtgttataagcaaaacttgatttatcaaaaacaggttcatagtattttatatttagtact  4944700                                                                                                    -                                                                                                   <-                                                                                                   <-                                                                                                  <--                 <-------MYC3                                      <----------ID1                 ---                 ------->MYC2                                <---------AHL20(2)                   <--                 <-------MYC2     --------->ZAT14            --------->AHL20(2)                   ---                 ------->MYC3     <---------ZAT18            <---------AHL20(1)        <---------ANAC58        ------>ZmHOX2a(1)         --------->LBD16      --------->ANAC58                <---------ANAC58       --------->TOE2(3)       -------->P   <-----------GT1  --------->AHL20(1)   <------NtERF2------       --------->TOE1(3)       <---------At5g28300     --------->ANAC58  <---------YAB1<---------ANAC46   <----------DOF2           --------->MYB46(3)        ----------->GT1   <---------TOE2(3)     ------   ataagctttccttaaaccatgtgcaaaaccatctaccgcagtctaattaccaatagcaagtaataaaatgggactaacattggaggcatacgtggaataa  4944800                                               <---------WOX13(1)                                              <------------CBF                             --------->ALFIN1<---------ICU4                             <-----------RAV1(1)   --------->CCA1(2)        <------ZmHOX2a(1)--------->CCA1(2)   --------->ATHB12                              <--------- -------->ATHB12       --------->YAB1        <--------ATHB1                               --------->ATHB12 --------YAB1         <---------YAB1         --------->ATHB51                             <---------ICU4 --------AHL20(2)   -------->HAHB4          --------->ICU4                               <---------YAB1 -------AHL20(2)    <---------ICU4          <---------ATHB51                           --------->REM1(1) ------>AHL20(2)    --------->YAB1     --------->ANAC58                     <---------ANAC58   <----- -------AHL20(1)   --------->ICU4      --------->ANAC58              ----------->TBP ----------->RAV1(1) ------>AHL20(1)   <---------ATHB51  <-----------RAV1(2)       <---------ANAC46   --------->ANAC46  - --->YAB1        --------->YAB1    ----------->RAV1(1) --------->ANAC58     <---------ANAC46   <----- --->AHL20(2) ----------->GT1====================RAV   --------->ANAC58     <---------ANAC58  <------   tataattggaggaatacagtaataatgatatgtgttgccacagggaataattgatacgagcaaatgtgtgtatatatagcttatatgcaacatcattggg  4944900                                                                                    <------MYB46(1)     ------->GAMYB                                                                  <------MYB83    --------->MYB46(3)                                                         --------->ALFIN1   *TSS                                                                        <---------ZAT6 ---CBF                        <----------DOF2                               <---------ANAC46 ----ANAC58             --------->ZAT14                                      xxxxxxxxxxxxxxxx>smallRNA(fl3) ----->ZmHOX2a(1)       <---------ZAT14                                     <------ZmHOX2a(1) ----ANAC58             <---------ZAT18              --------->ZAT6 --------->ARR11(3)   <----------DOF2 ---MYB46(3)   ------>ZmHOX2a(1)        --------->TOE2(3)        <------ZmHOX2a(1) --------->MYB59   tcctcaaccaaaaactcctctctcagtacacttcttttcatacctcaagagactaaaactagtttgaggagatttagaggagtgtttggttctttggata  4945000                                                                                                   <-                                                                                                 <---                                                <---------WRKY18(1)                             <----                                            ------>ZmHOX2a(1)                                 <------                                  <---------At4g35610         ------>ZmHOX2a(1)       <---------ALFIN1  <---------ARR11(3)              --------->At4g35610      ---------->ID1        ----------->GT1<----   acaatatcccaaactgaaaatggctaagtcatatggagctatcttcctcttgaccctcattgtcctcttcatgcttcaaaccatggtaacacctctatta  4945100                                      <---------AHL20(2)                                     <---------AHL20(2)                                     <---------ARR11(3)                                     --------->ARR11(3)                                     --------->AHL20(1)                                     --------->AHL20(2)                                     <---------AHL20(1)  <-----------GT1                 --------->AHL20(2)  ------>ZmHOX2a(1)                    -------->ATHB1 --------AHL20(2)               <---------ARR11(3)    <---------YAB1                       --------->ATHB51 ------YAB1                     --------->ARR11(3)   --------->TOE2(3)  <----------ID1     --------->YAB1 -----AHL20(1)         <---------AHL20(1)    <---------WOX13(1)     --------->CCA1(2)     <---------YAB1 ---YAB1<----------DOF2--------->AHL20(1)   >>>>>>>>>ARR2      --------->MYB52(1)      ------------>ATHB5 -----AHL20(2)         --------->ARR11(3) <---------AHL20(2)  <---------SPL7   <-----------RAV1(1) <-   tttttttcttctttcaatgtttgaaaatattgaagataatatatttgattgttttccttattgacgaacgatatgagacaaatgtgggttctattattgt  4945200                           <----------DOF2                          <---------DAG2                       <-----------GT1                      <-----------GT1           <---------ANAC58                 <---------AHL20(2)             <---------ANAC58                 --------->AHL20(2)           <-----------GT1             <---------AHL20(2)          <---------AHL20(2)            <---------AHL20(2)          <---------AHL20(1)                      <---------TOE1(3)  <-            --------->AHL20(2)          --------->AHL20(1)                <---------MYB52(1)       <-            --------->ARR11(3)          <---------AHL20(2)       <----------DOF2--------->MYB59    --            <---------ARR11(3)          --------->AHL20(2) ------>ZmHOX2a(1)    <---------TOE2(3)  --            --------->AHL20(1)   <---------TOE2(3)      <-----------GT1---------->ID1              <-            <---------AHL20(1) <---------AHL20(2)      <-----------GT1<-----------GT1           ----- ---------DOF2  --------->AHL20(2)     --------->AHL20(2) <------------------------ANAC81  <------NtERF2   acttttagttggaatatatttaatttagcctttttaatgaaattaattttacttgtttttcctctctctttttttcgttttttaggttatggcctcaagt  4945300                     <-----------HVH21                    --------->TGA1a               --------->TCP16(1)          <---------bZIP60(2)   --------->ATHB12          <---------ANAC46  <---------AHL20(2) ------>ZmHOX2a(2)  --------->bZIP60(2) --------ARR14(2)   <---------ZAT2                     <----------DOF2                              - --------ARR11(3)   --------->O2--------->ATHB51      <---------DAG2                           ------ ------->ARR14(2)   ==============================================bZIP_DOF               <---------CCA1(2) ------->ARR11(3) <-----------RAV1(2)              <-----------GT1      <-----------GT1----------->GT1 --------AGP1  --------->TCP20 <---------YAB1----------->GT1<-----------GT1            --------->ANAC55(2) ---->ALFIN1--------->ALFIN1--------->AHL20(2)  <---------ICU4       <---------AHL20(2)<---------ANAC55(2)   ggatctaatgtgaagtggagccaggtcagttttattattgaatcgactagtaattaccttttaaactatattttatacctattgttatctcgtaacttaa  4945400  Previous    Next  AGI:  At5g15230.1    Description:  GASA4 (GAST1 PROTEIN HOMOLOG 4). Identical to Gibberellin-regulated protein 4 precursor (GASA4) [Arabidopsis Thaliana] (GB:P46690;GB:O49593); similar to gibberellin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT1G74670.1); similar to Gasa4-like protein [Pelargonium zonale] (GB:AAQ57667.2); contains InterPro domain Gibberellin regulated protein (InterPro:IPR003854) Range:  from: 4944903    to: 4946219    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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