Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                   --                                                                                                   --                                                                                             <-------               <----------ID1                                                                <-------             ----------->GT1                        <---------ICU4                           <-------           ---------->DOF2                    --------->TOE2(1)                        <---------LBD16         --------->YAB1                       --------->TOE1(1)                     <---------GLK1(1)        <---------ATHB12                     ------>ZmHOX2a(1)                 ---------->DOF2-------      --------->WOX13(1)                 --------->GLK1(2)               ----------->GT1   <---------    <---------YAB1   ----------->GT1    <---------GLK1(2)           --------->LBD16--------->ARR11(3) ------>AHL20(2)   ---------->DOF2     --------->HSFB2a(1)        <---------LBD16  <---------ARR11(3)   atatttatcaatgaaaagagaaaaagaaataacaaaaacaaagattcctagtactcattcccatataatccggtgaagaaaaaaagatttcagggtcaaa  4898300                                                   <---------ATHB12                                                   <---------YAB1                                                  <---------TOE1(2)                                                 ------>ZmHOX2a(1)                                                --------->TOE2(2)        --------->AHL20(2)                    <<<<<<<<<ARR1 ------->ANAC58        ---------->DOF2        <<<<<<<<<ARR1 ------->ANAC46   ------->TEIL                <<<<<<<<<ARR2                             <---------AHL20(2) ------->ANAC58<---------ANAC55(2)            <<<<<<<<<ARR2  <---------AHL20(1)        <---------YAB1 --WRKY45      <---------ANAC46       --------->ANAC46     >>>>>>>>>MYB98             <---------AHL20(2) --WRKY12--------->AHL20(2)         --------->ANAC58      <-----------GT1          ------->TEIL --WRKY38(1)   <---------YAB1       --------->ANAC58     <-----------GT1     <-------TEIL --->DOF2<---------AHL20(2)         --------->ANAC46--------->YAB1      --------->AHL20(2) --HVH21<---------AHL20(2)         ------->GAMYB--------->TOE1(2)       <---------AHL20(2)         --   gacgacatttttaaattatgtatatcaaagtaaacaacacacaaaacaatcctatgattttaacatatttcaaattaaatacatgtatttttatttgtca  4898400                                           --------->YAB1                                           -            ------->TEIL         <---------YAB1                                                     -     --------->AHL20(2)        <---------ICU4                       --------->AHL20(2)              -     <---------AHL20(2)        --------->YAB1                  --------->AHL20(2)                  -- <---------AHL20(2)           --------->ICU4             <---------ZAT6                          <--- --------->AHL20(2)           <---------ATHB51      >>>>>>>>>>>>>>>>>LFY                      ------- ------->AHL20(2)  <---------AHL20(2)      ----------->GT1   ----------->GT1       <-----------GT1 <-   aatttatataaatgaatctatgaaattgacaaattatgagtgaaatagtaattcagccagtgtaagtaaataaaacaaatctaataaaccggctatttat  4898500     --------->LBD16    ------->GAMYB                          --------->YAB1  ------>MYB83                            <---------YAB1  --------->MYB52(1)                     <---------AHL20(2)  ------>MYB46(1)                        --------->AHL20(2)  -------->P                          --------->AHL20(1) --------->MYB55(1)                   --------->AHL20(2) --------->MYB52(1)                   <---------AHL20(1) -------->AtMYB61                     <---------AHL20(2) -------->MYB46(3)                 --------->YAB1 ------>GAMYB  <---------ZAT14  --------->YAB1                            <----------DOF2          -- ------->MYB46(3)              <---------YAB1                         ---------->ID1        --------- --------GT1<---------ZAT6  --------->TOE1(2)  --------->DAG2       <-----------GT1        ---------- -->YAB1<--------P          --------->TOE2(2) ---------->DOF2    --------->ARR14(2)     --------->MYB52(1) --------MYB52(2)  ----------->GT1<---------YAB1     ------->TEIL<---------ARR14(2) -----------------   aaccaaccgggttagagtaaaccgataaaacatatgataatattttaataaagtgtatgtgtttccaaatttgcccctttgcgaagaccgaaacggataa  4898600          <----------DOF2         <---------MYB52(1)    --------->GLK1(2)    --------->ARR14(2)    <---------ARR14(2) -------->DOF2                                                                     ------>ZmHOX2a(1) -->GT1 <---------At4g35610              ---------->DOF2              --------->YAB1             <--- ->GT1  --------->LBD16   --------->DEAR3(1)        <------NtERF2    <---------ATHB51<----------DOF2 >AGL1  --------->At4g35610        <------ZmHOX2a(1)----------->RAV1(2)  ----------->GT1        <----   aaaaagaatccgctgtttgaaaaaaacacagcccataggaaacaaaagaatggcccctggttttgtaatcgataatggtataatcctcttttcttatttt  4898700                                                             <---------ANAC58                   <----                                                             <---------ANAC55(2)                <----                                                    <----------DOF2                             <----                                               <-----------GT1                                  <----          <---------ARR11(3)                  <-------TEIL   <---------ANAC58                   <----          --------->ARR11(3)                --------->ARR14(2)                       <---------AHL20(2)         <---------CCA1(2)                  <---------GLK1(2)--------->ANAC55(2)<---------AHL20(2)  -     <-----------TBP                      <---------TOE1(2)  <---------ANAC46   --------->AHL20(2)  < --------GT1          <---------YAB1    *TSS<---------ARR14(2)                  <---------AHL20(1)  < -------GT1        <---------YAB1       <---------LBD16<---------YAB1  ----------->GT1     <---------   tccctgtttttatatctcattcttattcttcttaaatccattcccagattcacacttttgatttcgtgatacactgttacattttatttttttttgttgg  4898800 <------MYB46(1) <---------ANAC46 <------MYB83 --MYB83 <----------DOF2 -----ANAC58 -----ANAC46 -----ANAC58 --MYB46(1) -------->MYB46(2)                                          --------->HSFB2a(2)                     > ---------AtMYB61                    ---------->DOF2        <---------HSFB2a(2)                 ----- ---------MYB46(3)      <---------At4g35610           --------->ATHB12   --------->AtLEC2    <------- --RAV1(1)              --------->At4g35610 <---------ARR14(2)      --------->GLK1(2)     --------->GLK1(2)   gtttggtgagacttttatggggtttgagatgaaaccagagaaagaggttttggaattgatttctagtaagaatcaatgcaagtctaatcccaattctgtg  4898900                                                                                            <-------GAMYB                                                                                           --------->MYB55(2)                                                                                           <---------MYB46(3)                                                                                           <---------DEAR3(2)                                            <------NtERF2                                 <---------DEAR3(1)                                           ------>NtERF2                                  <---------ANAC46                                          ----------->HVH21                              ------>NtERF2                                          --------->ETT(2)                               <------NtERF2                                          <---------DEAR3(1)                            <---------RAP2.3(1)                                         <------NtERF2                                  ------------>AtMYB77                                       --------->ALFIN1                                <---------DEAR3(1)                                     <---------TGA1a                                   <---------RRTF1(2)                                     <---------O2                                      <---------RAP2.6(2)                                     --------->bZIP60(1)                               <---------RAP2.3(2)                                     --------->TGA1a                                  <---------ABI4(1)                                     --------->ANAC55(2)                              --------->ABI4(2)                                     --------->O2                           ----------->HVH21 <------                                     <---------ANAC58                <-------GAMYB   --------->ALFIN1                                     <---------bZIP60(1)             <------NtERF2  --------->ATERF1(1)                                     <---------bZIP60(2)            <---------SPL7 <---------DEAR3(2)                                     <---------ANAC58               <---------MYB46(3)--------->SPL7                                     <---------ANAC55(2)           <---------ANAC46<---------DEAR4(2)                                     <---------ANAC46             <------NtERF2    <---------MYB46(3)                                     ========================================MYC_MYB<------NtERF2                                    ----------->bZIP910(1)       <---------ATERF1(1)<---------SPL7                                    ----------->STF1             --------->LBD16  <---------DREB2C(2)                                  ----------->TGA1               ------>NtERF2    <---------DEAR3(1)     <----------ID1             <---------ICU4                  <---------DEAR3(1)--------->ALFIN1   >>>>>>>>>TBF1               --------->ICU4--------->ANAC58   --------->ANAC46 <---------ABI4(1) >>>>>>>>TBF1                  <---------YAB1--------->ANAC58  --------->LBD16 --------->ANAC46 ---->REM1(2)        --------->YAB1<---------TGA2(2)           <---------LBD16<---------LBD16<------- --ANAC46         --------->YAB1--------->YAB1         <---------WOX13(1)   <------ZmHOX2a(2)<-------   aagaagaagaacaaaaacaagaataagaagatgatgatgacgtggcgacggaagaagattgattccccggcggatgggatcacggcggtgcggcggttgt  4899000         --------->ANAC58                                                     --------->GLK1(2)         --------->ANAC58            <---------ZAT6                --------->ZAT2  <---------ICU4             <---------MYB46(3)                    --------->At4g35610 ---MYB46(3)                <---------AtMYB61                    --------->MYB46(3) --MYB52(1)     --------->ZAT14   ------>ZmHOX2a(1)            ----------->RAV1(1)               <--- -P    <---------AtLEC2  <-----------RAV1(1)            --------->AHL20(2)   <---------GLK1(2)  <----   ttaatacttgcaaggaagtgttctctaatggtggtcctggtgttattccttctgaagataaaatccaacagctacgagagattcttggtatacaattttt  4899100                         <---------GLK1(1)                         --------->GLK1(1)                    <---------LBD16                                                                 <              <---------ANAC58                                                                      -          --------->GLK1(1)            <---------YAB1                                     <---------DEAR3(2)          <---------GLK1(1)  --------->TOE2(3)<---------YAB1                        <------ZmHOX2a(1) --------GT1  <---------ANAC46   --------->DAG2  <---------WOX13(1)    --------->CCA1(2) <---------DREB2C(2) -------GT1   <---------ANAC58  ---------->DOF2--------->ATHB12       <---------ARR14(2)--------->DDF1   atcagttttctgaattccttgttctgggtttccataaagttttgatttttgattggattttggtttatagacgatatgaaaccagaggatgtcggtttaa  4899200  Previous    Next  AGI:  At5g15120.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G39890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14912.1); contains InterPro domain Protein of unknown function DUF1637 (InterPro:IPR012864) Range:  from: 4898740    to: 4900584    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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