Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->MYB52(1)                   ----------------->AGL3                               --------->ANAC58          ---               ----------->HVH21                                        --------->ANAC58          <--       <---------ATHB12                                                 --------->ANAC46       <-----  <---------At4g35610              --------->LBD16                  --------->CCA1(2)        --------  --------->At4g35610   --------->DAG2          ----------->GT1  ----------->GT1            ---------   aaccagctaatcaacgagtgacccaaaaattgaaacccagagaaccagtcttgttattctatctatacagataaacgaaacggatagcataaatctgacg  4891100                         <---------ZAT18                       --------->ZAT2                                                <---------WRKY18(1)                       <---------At4g35610                                          ----------->HVH21                       --------->At4g35610                                         <-----------HVH21          --------->ARR11(3)                   <----------DOF2                    <---------ANAC58 <---------MYB52(2) <---------ATHB12           <---------DAG2                     <---------ANAC58 ------>ARR14(2)  --------->WOX13(1)       <---------AHL20(2)                  ---------->CDC5 -------ARR14(2)<---------YAB1             <-----------GT1                   --------->AtMYB61 ----ANAC46<---------RVE1(1)       --------->ANAC58                          <---------MYB59 ->MYB52(1)<---------CCA1(1)       --------->ANAC58     ------->TEIL      ------->GAMYB -->HVH21 <---------ARR11(3)--------->ANAC46<-----------GT1              --------->MYB46(3)    <-----   gaaacgaacacagatattatcaatcagctcacaaaacacgaatatttaactttttatgcatctattcaaatttcaacgacctaagcgtgaccgatagaaa  4891200                                                <---------MYB59                                                --------->TOE2(3)                                                --------->AtMYB61                                ----                            <------------MYB.PH3(1)                                           -------                       --------->TOE2(3)        --------->TOE1(3)                 --------->ANAC58                       --------->TOE1(3)------->TEIL                 --------->At4g35610     --------                    --------->GLK1(1)<---------ATHB12      <------ZmHOX2a(2)      --------->ANAC46         <---------LBD16  --------->MYB52(1)  ------->TEIL--------->ARR14(2)      --------->ANAC58<-- ----GLK1(1)<------ZmHOX2a(1)       <XXXXXXXXXXXXXXXXXXXXMIR843 ---------->DOF2   --------->ANAC55(2)   tcggaataaaaccaggaatgagaaaccctaaccgattcaatgaatatcaacctaaacccagatcagaaaagagctcaaatgtttacgaaatgtcaacaac  4891300                                                                                                   --                                                                                                  ---                                                <---------DAG2                                    <--                                                <----------DOF2                                  <---                                               <----------DOF2                           --------->ATHB12                                      ------->TEIL                                      --------->ICU4         <-----------TGA1             --------->SPL7                         ------->TEIL<---------ICU4         <-----------HVH21         ------>ZmHOX2a(2)                      <---------HSFB2a(2) <------        --------->ANAC46          <------ZmHOX2a(2)                       --------->HSFB2a(2) <------ --->GAMYB                        <---------------AtSPL3         <---------ZAT14        <---------YAB1 ---->RAV1(1)                    --------->ARR11(3)              --------->ZAT14<----------DOF2 ----- ->MYB46(3)  <---------YAB1      <---------ARR11(3)              --------->REM1(2)    --------->YAB1 ---------HVH21      ---------->DOF2<---------SPL7  <-----------GT1       ------>ZmHOX2a(1)<---------WOX13(1)   agtcacattcgcgtcaccatagagaaagagagagagatcgtacctctggcctttttgccgatttcagtgtagagtcctggacctttaaccatgattgcct  4891400                                                            --------->LBD16                             --------->LBD16               <---------HSFB2a(2)      <---------ANAC46 --------->GT1           --------->GLK1(2)                 --------->HSFB2a(2)<---------ANAC46 ------>HSFB2a(2)       <---------GLK1(2)                 <---------LBD16   <---------ANAC46 -------HSFB2a(2)      <---------HSFB2a(1)              --------->GLK1(2)  --------->ALFIN1 ------LBD16    <----------DOF2                        <---------ARR14(2)  <---------AtMYB61 ---ANAC58    --------->HSFC1(2)   <---------HSFB2a(2) --------->ARR14(2)<---------ANAC46 ---ANAC58    <---------HSFC1(2)   --------->HSFB2a(2) <---------GLK1(2) --------->ALFIN1           > ---------------->WRI1 --------->HSFB2a(1)            <------ZmHOX2a(1)<---------ANAC46          *TSS   ctggaaaaatcgaagaagctttgaaagattccgaagtcgagaagaagagtaatggaggattctggagaaaatgaggtgtggtgtttgtgtatataagggg  4891500                                    <------------CBF                                  <---------AHL20(2)                                 --------->YAB1                                <---------YAB1                               <---------AHL20(2)                               --------->AHL20(1)                               <---------AHL20(1)                             <---------YAB1                         <---------AHL20(2)                         --------->AHL20(2)                        <---------AHL20(2)                     --------->AHL20(2)                     <---------AHL20(2)                    --------->AHL20(2)                            --------->ARR11(3)                    <---------AHL20(2)                            <-----------ARR10                    <---------AHL20(1)                            <---------ARR11(3)                    --------->AHL20(1)                   ----------->GT1<---------At4g35610                   --------->AHL20(2)                    <---------ANAC55(2)<---------MYB52(1)             --------->TOE2(3) --------->AHL20(2)        --------->ANAC58  <---------RAP2.6(3)    <--            --------->ZAT6   <---------AHL20(2)          --------->ANAC58 <---------MYB46(3)      <--   ---------->DOF2 <---------AHL20(2)     <---------GLK1(1)      --------->RVE1(1)                <-- >>>>>>>>TBF1--------->TOE1(3)--------->YAB1<-----------GT1      --------->CCA1(1)               <---   aagaagaaagggtaaccctaaattaatttatattataatattgtatttccctgcttatcaagtaaaaatatctcagccgttagattaatatgacatgagt  4891600                              <-----------GT1                                           <---------AHL20(2)                           --------->ARR11(3)                               <---------ANAC46        <----------DOF2    <---------AHL20(1)                               <---------ANAC58 -------- -------DEAR3(2)        --------->AHL20(2)  --------->ANAC58                <---------ANAC58 <------- ----MYB46(1)      <---------MYB52(1)       --------->ANAC58     <---------AHL20(2)     <---------AHL20(1) ----MYB83   --------->MYB46(3)             --------->ANAC46    <---------AHL20(2) <---------YAB1 ------DEAR3(1) --------->MYB46(3) <---------ALFIN1<---------AHL20(2)<---------AHL20(2) --------->AHL20(2)   cggtgtccctctttatcaaccgttgattatatattcccctctctccaaggcattttttttatgttttttatttgattttcgtattcttattttatttttt  4891700                                                                                         --------->AHL20(2)                                                                                         <---------AHL20(2)                                                                                     --------->AHL20(2)                             --------->ANAC58                                      <---------AHL20(2)                             --------->ANAC58                                    <---------YAB1                      <---------ANAC58                                         --------->AHL20(2)                      <---------bZIP60(2)   <---------ZAT14                    <---------AHL20(2)                      <---------ANAC58      <---------ZAT18                   <---------AHL20(2)                 --------->ATHB12           --------->ZAT14                --------->AHL20(2)       <-----------GT1<---------AtLEC2      --------->REM1(2)              <---------AHL20(2)   <----------DOF2    <---------ANAC55(1) --------------->AtSPL8          --------->AHL20(1)  <------  <---------ANAC58    <---------ANAC46   <---------ANAC46                 <---------AHL20(1) <-------  <---------ANAC58    <---------ANAC55(2)<---------ANAC58                 --------->AHL20(2) -------- ->AHL20(2)     <---------YAB1           <---------ANAC58                 <---------AHL20(2) <------- --AHL20(2)    <-----------GT1  ---------->DOF2                    --------->LBD16 --------->AHL20(2)   tatggcttttttccatttttcattgcgtggcaagcaaagcaggccgtgtactctctagttttcttcatccccaaaatttatttatttttatataattttt  4891800    <---------MYB46(3)                      <-----------GT1 <-----------RAV1(1)                    <---------ZAT6                       --------->AHL20(2) ---AHL20(2)                 <---------AHL20(2)  --------->At4g35610     --------->ICU4 --AHL20(1)                  --------->AHL20(2)------->GAMYB       <---------TOE2(3) ->AHL20(2)    ----------->HVH21 <---------AHL20(2)          <---------YAB1  <---------AHL20(2)    <- --AHL20(2)  <----------DOF2--------->AHL20(2)--------->MYB46(3)<---------YAB1       --------->TOE2(3)   tttttgttgttgagtctttgacaatgtctatttattttcttagagttaaccatctgaattgttcttattaatgtgatatttaaattttcttaaatggtgt  4891900                                                                                               <-----                                                                                              <------                                                                                              -------                             <-----------GT1                               ----------->HVH21  <------        <-----------GT1     --------->YAB1 ---------->DOF2          <-----------GT1           ------- ---------DOF2------>ZmHOX2a(1)  ------>ZmHOX2a(1)            <---------YAB1           <-----------GT1   tcttttatatttactcctatatagtatctattatcctattttttaaaaagaataagtcaaaattttgattttactagttgacatgtttttttctaattta  4892000  Previous    Next  AGI:  At5g15090.1    Description:  porin, putative / voltage-dependent anion-selective channel protein, putative. Identical to Outer mitochondrial membrane protein porin 2 (HSR2) [Arabidopsis Thaliana] (GB:Q9SMX3;GB:Q8L815;GB:Q8LET4); similar to porin, putative [Arabidopsis thaliana] (TAIR:AT3G01280.1); similar to unknown [Brassica rapa] (GB:ABB97031.1); contains InterPro domain Porin, eukaryotic type; (InterPro:IPR001925) Range:  from: 4889298    to: 4891497    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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