Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->ANAC46                                                      <---------GLK1(2)                                                    --------->LBD16        --------->YAB1                             --------->HSFB2a(2)                          <----     --------->YAB1                             <-----------GT1  <---------ALFIN1           --------- -------GLK1(2)                 <---------AHL20(2) <---------HSFB2a(2)               <-----------GT1 --->DOF2            ---------->DOF2    <---------MYB52(1)  <-----------GT1  <---------MYB52(1) -----   gcttctctaataacaaatgtcgttatagctcggtttaattctgttttttttttccagattataaaccccacttcaagtcgttttgtttaactaattagtg  4876100                                           ------->GAMYB                                        <----                                          --------->MYB46(3)                                   ------                                         ------>MYB46(1)                                       <-----                  <---------ARR11(3)     ------>MYB83                                          <-----                  <---------AHL20(1)    ----------->RAV1(1)                                    ------  ------->TEIL    --------->AHL20(2)    --------->MYB52(1)                         <---------WOX13(1) -----ZAT18       --------->AHL20(1)   ------->GAMYB                             --------->ATHB12 >ATHB12       --------->YAB1         --------->MYB46(3)                        <---------YAB1 <----- ---->ZAT18<---------WRKY38(1)   <----------DOF2                     <----------DOF2           ------   gacgaaccatgagtcaacaatattttagaatttggctttaaccaacagacaatatttcttcaacatttgctctttcagtcatttgattggataacaatat  4876200            --------->ANAC46          <---------ALFIN1         <---------REM1(2) -----AHL20(2)                                                                                    <-- --->AHL20(2)                                                                                  ------ ----AHL20(2)                   <---------ANAC58                                               <----- ----AHL20(1)                   <---------ANAC58                                              <------ --->AHL20(1)             <---------YAB1 --------->AHL20(2)                               <---------ZAT6 ----ARR11(3)  <-------MYC3     <---------ANAC55(2)              <---------YAB1     <-----------GT1 --->ARR11(3)  ------->MYC3     <---------ANAC46          <-----------GT1   ----------->GT1   <------   atttgataggctacacacatggaccatttcgattacttgaaaatttaaaacgcgttctattgaccttctcattaggcattgtgaatttactagtgtataa  4876300                                                                                   <---------ARR14(2)                                                                                   ------->TEIL                                 --------->YAB1                                    <-----------GT1                                 <---------ICU4                                 --------->ANAC55(2)                       <-------TEIL --------->YAB1                              <---------ANAC55(2)                     --------->ARR14(2)                                      <---------YAB1     <---------YAB1  <---------ARR14(2)                                    --------->YAB1 ---------GT1     <---------ANAC46  <-----------GT1                --------->At5g28300 --->YAB1   <---------AHL20(2)  --------->KAN4(1)                 ----------->GT1  --------->ARR14(2) ----ICU4  --------->AHL20(2)  <---------KAN4(2)         ---------->DOF2  <---------YAB1 ---AHL20(2)--------->AHL20(2)--------->YAB1          ------>ZmHOX2a(1) <---------ICU4 ---YAB1--------->ICU4--------->CCA1(2)              --------->TOE2(3) --------->ICU4   ttacattgtgatatttaattgtggatacacaagaataatcacaattttagaacttcctaaaaagaacaccgtaaatattatcatgtatccacttattttt  4876400                                           --------->AHL20(1)                                           --------->AHL20(2)                                           <---------AHL20(2)                                    <-------GAMYB                                   ----------->GT1                                   <---------MYB46(3)                                   --------->MYB55(2)                                 <-------GAMYB                                 <---------MYB52(1)                                <------MYB46(1)                                <---------DEAR3(2)                               --------->MYB46(2)                               <---------DEAR4(1)                               --------->MYB55(2)                               <---------DREB2C(2)                               --------->MYB111(2)         --------->ICU4                               <---------DEAR3(1)          <---------YAB1    --------->YAB1                               <---------MYB46(3)  --------->YAB1          --------->ANAC58                              <---------ORA47(1)   <---------ICU4          ------>MYB83                              <---------MYB55(1) <---------YAB1            ------>MYB46(1)          -                             <-------GAMYB<---------AHL20(2)               --------->AtLEC2         <                             <-----------HVH21 -------->ATHB1              --------->ANAC46         <                            <---------SPL7--------->AHL20(2)               --------->ANAC58   -------                            <---------DEAR3(2) <---------ICU4     --------->YAB1 --------->GLK1(2) <-                            <---------MYB46(3)<---------ATHB51   <---------YAB1  <---------ARR11(3)--                           <---------DREB2C(2)<---------AHL20(2)--------->AHL20(2)        <---------AHL20(2)                           <---------At1g77200--------->AHL20(2)<---------AHL20(2)    ----------->TBP                <---------ANAC46<------MYB83  --------->ICU4 <---------ARR11(3)  --------->ARR11(3)<-   taaaaattcacttgagttttgtatagttgtcggtcggtggttaattaaattattaatgaccatgattttaataaaccaagcaaaatctatatataatggt  4876500                                          ------>NtERF2                                         --------->ANAC58                                      ----------->HVH21                                    <---------At4g35610                                    --------->At4g35610                             --------->ZAT18                                <---------ALFIN1                                    --------->ZAT14                                --------->ANAC58<---------ARR14(2)                  <---------ZAT18    <---------AHL20(2)          --------->ANAC58------->TEIL                        <---------ZAT14 -------->YAB1                  --------->DEAR3(1)  ----------->RAV1(2)           <---------At4g35610 --------HAHB4             --------->ANAC58     --------->ARR14(2)            <-----------HVH21 ---------ICU4             --------->ANAC58    <---------CCA1(2)             <---------bZIP60(1) -->YAB1                   --------->ANAC46----------->RAV1(2)           <-------PIF5 --------ATHB12    <---------YAB1   ----------->RAV1(2)                  ------->PIF5 ------->ICU4     *TSS   ---------->DOF2 --------->ANAC58              ------>ZmHOX2a(1)   --------->ZAT6 --------YAB1   --------->ICU4 >>>>>>>>>MYB2   <---------GLK1(2)  <----------DOF2 --------->At4g35610   aatcattttttttttgtaattctgattcaaagcaacgcctctgacgcctgaatcttctggctctctctctttcctcgtgccatcagcgcactatctctag  4876600                                                                    ------>ZmHOX2a(2)                                                                  <---------ARR14(3)                       <---------ICU4                             --------->ARR14(3)                      <---------YAB1                              <---------ARR14(2)                    <---------ICU4                                --------->ARR14(2)                    --------->YAB1                  <----------DOF2<------ZmHOX2a(2)                   --------->ICU4                   <---------DAG2<---------ARR11(3)                   <---------YAB1              ===========================HOX2a_HOX2a          <-----            <---------ANAC58                   ------>ZmHOX2a(1)  --------->ARR11(3)       --------->ZAT18            <---------ANAC58   --------->LBD16 ============================HOX2a_HOX2a     <---------ZAT18   ctattgctctctctgcttgtgatcatcattttccccagtaacgtttctcctcgactttttctctgcgagatctcgcattgctctctcatgttatgcacta  4876700                                 ------>NtERF2                               <---------ANAC58                               <---------ANAC46                               <---------ANAC58                       --------->YAB1                       --------->TOE2(3)         <---------KAN4(1)                    ------>ZmHOX2a(1)            --------->KAN4(1)                    <---------CCA1(2) <---------ICU4                  ------>ZmHOX2a(2)  <---------ATHB12                --------->ARR11(3)   --------->ICU4           --------->ANAC58                      <                <---------ARR11(3)   <---------YAB1           --------->ANAC46                     <-              <---------YAB1   <---------RAP2.6(2)--------->KAN4(2)          --------->ZAT14    <---- ----ALFIN1 --------->YAB1--------->MYB52(2)--------->LBD16   --------->ANAC58              ------->TEIL   cctgtttcttctatttatgatcctatcttagttgcggccatgattccgagattgttccaaacccaagcgatttagtctctgttctctctgaacgaatttt  4876800                                                                 ---------->DOF2                                                              --------->ANAC58                                                            --------->MYB52(1)                                                         --------->ANAC58    --------->ARR14(2)        <---------ANAC46                                 --------->ANAC58    <---------ARR14(2)   <---------ANAC46                                   <------ZmHOX2a(1)   <---------ANAC58 ---------MYB52(1)                                 <---------HSFB2a(2)    <---------ANAC58 ------GAMYB                                       --------->HSFB2a(2)   <-------TEIL<------ZmHOX2a(1) -------GT1  ------->TEIL                      <---------SPL7 --------->ANAC58 <---------LBD16    ---   tcgttgtgttttgtgaatctctgatttcagacggagaacgagagaacgtcgttcgaggaacgaaacggaaagaggttcgtatcgggaggagagagcgaaa  4876900                                                                               <------NtERF2                                                                              ------>NtERF2                                                                             --------->DEAR3(1)                                                                             --------->TCP16(1)                                                                             --------->PCF5               <---------At4g35610                --------->ANAC46          --------->ATERF1(1)               --------->ZAT2                 --------->ATERF1(1)           ------>NtERF2  <---------               --------->At4g35610    --------->ATHB12           ----------->GT1 --------->LBD16             <------ZmHOX2a(1)     <---------DOF5.7(2)     ---------->DOF2 <---------ATERF1(1)    <--    --------->ALFIN1               --------->MYB52(1)  --------->AtLEC2    <---------RAP2.3(1)    <-- <---------DEAR3(1) <---------ANAC46 <---------YAB1<-----------TGA1       <---------RAP2.6(2)     <-- ------>ALFIN1 <---------ZAT2    --------->ARR11(3)<-----------HVH21      <---------RAP2.3(2)  <-----   atgggggtggaagaaggagctggtgttgataagaagataacgattggagtctgcgtcatggaaaagaaggtgaaatgcggccccgaggttttgtttcctt  4877000  Previous    Next  AGI:  At5g15070.1    Description:  acid phosphatase/ oxidoreductase/ transition metal ion binding. similar to acid phosphatase/ oxidoreductase/ transition metal ion binding [Arabidopsis thaliana] (TAIR:AT3G01310.1); similar to acid phosphatase/ oxidoreductase/ transition metal ion binding [Arabidopsis thaliana] (TAIR:AT3G01310.2); similar to hypothetical protein OsI_012687 [Oryza sativa (indica cultivar-group)] (GB:EAY91454.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ65918.1); similar to Histidine acid phosphatase [Medicago truncatula] (GB:ABN07938.1); contains InterPro domain Histidine acid phosphatase; (InterPro:IPR000560); contains InterPro Range:  from: 4876518    to: 4885824    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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