Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <------NtERF2                                    --------->LBD16                                    <---------LBD16                                    <------NtERF2                           --------->MYB46(3)                           --------->DREB2C(2)                           --------->DEAR3(1)                           ----------->HVH21                           ------->GAMYB                           --------->At1g77200                          <------NtERF2                          --------->MYB46(3)                        <---------YAB1                          --------->DEAR3(2)                  <---------ANAC46                         --------->MYB52(1)                  <-------TEIL  <---------At4g35610                         ------>NtERF2                     --------->ARR14(2)                        --------->DEAR3(1)                 <---------ARR14(2)                     <--                       --------->MYB46(3)        <---------ANAC58<---------ARR14(2)              ----                       <---------MYB55(2)        <---------ANAC58--------->ARR14(2)<---------ANAC58                 ----------->HVH21 <---------DEAR3(1)      <---------GLK1(2)       <---------ANAC58 - -ANAC58       <---------ANAC58    <---------LBD16   <-----------RAV1(1)============================= -ANAC58       <---------ANAC58    <---------ANAC46 <---------TOE2(2)   ------>ZmHOX2a(2)<----------DOF2   gaagatggaaaatgtattcgtgacagccaccgacgggccggggaattgagagcgtatgttggattcgtatatgatcgagctcattgcttctctttgttcc  4875600                                                                                            ---------                                                                                           <------NtERF2                                                                                          --------->LBD16           ------>ZmHOX2a(1)                                                             --------->RAP2.3(2)         --------->YAB1                                                                  --------->RAP2.6(2)        <<<<<<<<<ARR1                                                                    --------->LBD16        <<<<<<<<<ARR2                                                                   <---------LBD16        <<<<<<<<<ARR2                                                         <-----------RAV1(1)        <<<<<<<<<ARR1                                                         <---------REM1(1) -------LBD16           <----------DOF2                               <---------GLK1(1)--------->LBD16 -->ZmHOX2a(1)          <---------DAG2                            <---------HSFB2a(2)  ------>NtERF2< -------->LBD16        <-----------------AGL3                     --------->HSFB2a(2) --------->DEAR3(1) ===HOX2a_HOX2a  <----------DOF2    <---------ANAC46     <---------YAB1       --------->bZIP60(1)  <-   tccggagacaatcctaattctttgagctttttttggagacgggtattggaatgtagacgatgaaagttttggaactcttgatgtcgctccgccggaaagt  4875700                                        <---------ANAC58                                       ------>NtERF2                                    <------MYB83  <------NtERF2                                    <---------DEAR3(2)            --------->ARR14(2)                                    <------MYB46(1)       <---------ANAC58       --------->ANAC46                                   --------->ALFIN1<---------ANAC46      <-------GAMYB                                 <-------GAMYB   <---------ATERF1(1) ------->GAMYB <---------LBD16                                <---------ANAC46 <---------RAP2.3(1) --------->ANAC46                                <---------DEAR3(1)--------->RAP2.3(1)--------->DEAR3(1)                             <---------DEAR3(1)  <---------ORA47(2) --------->MYB46(3)      --------->ANAC58     ------->GAMYB<---------ANAC58  <---------ANAC58<---------MYB52(1)      --------->ANAC58    ----------->HVH21      <---------DEAR4(2) <------------AtMYB77    ---------->DOF2       --------->MYB46(3)    <---------RAP2.3(2) --------->DEAR3(2)  --------->ANAC58 --------->ALFIN1<---------AtMYB61------>NtERF2 <---------ARR14(2)  <------NtERF2  --------->ANAC58 <---------ANAC46<---------DEAR3(1)    <---------MYB46(3) --------->MYB52(2) ->DOF2        --------->ZAT14 <------NtERF2    <---------DEAR3(1)--------->MYB52(1) --------->LBD16 ------ZmHOX2a(1) <---------MYB52(1)<---------MYB46(3)  <---------AtMYB61--------->At5g28300 ---------ID1  <---------ZAT14------>NtERF2 ---------->DOF2<---------WOX13(1)  <-----------GT1 ------   aaggacgaaagaaacagtccggtgtgcaacgacggcgttggtgcctgcaagcggcgcattggttgacataaccgccgttatttacgccggaagagccttg  4875800                                                                   <------NtERF2                                                                  ------>NtERF2                                                                 --------->DEAR3(1)                                                                 <---------DEAR3(1)                                                               <-----------HVH21                          ====================================MYC_MYB                          <---------TGA1a                    <------NtERF2                      ------>ZmHOX2a(2)                 --------->MYB59                     <---------At4g35610              <---------MYB52(1)                   <---------ZAT14                    <<<<<<<<<MYB98  <---------ARR14(2)            -                 <---------WOX13(1)              ------------>MYB.PH3(2)    <---------YAB1        <-- --->AtLEC2   <---------YAB1     --------->GLK1(2)  <---------MYB46(3)--------->ARR14(2)  <----------   caatgtcatcaagatgatgactgatctgatgtgagaatcaagaagaaaatgagtttgttaggcatcgtcgccgattttgttatagttttttttttctgta  4875900                                                                                    ---------->DOF2                                                                                 --------->AHL20(2)                                                                                 --------->YAB1                                                                                <---------YAB1  ----------->GT1                                            <---------YAB1     --------->ICU4 ----------->GT1                               --------->ANAC58               --------->YAB1 -------->ALFIN1                               --------->ANAC58               <---------ICU4      <-- -------ANAC46--------->ATHB12        <---------ZAT14--------->YAB1          <---------YAB1   ------- -GT1  ---------->DOF2        <---------AHL20(2)    *TSS   --------->YAB1    --------->ICU4--------->AHL20(2)   gagtgggaaaaaagaaagattgaaacgagtatttatagagaacagagtgaagcaagaagaattataagagatagatttgataattataaagaattaaaaa  4876000                                                              --------->ANAC46                                                      <---------GLK1(2)                                                    --------->LBD16        --------->YAB1                             --------->HSFB2a(2)                          -----     --------->YAB1                             <-----------GT1  <---------ALFIN1           --------- -------GLK1(2)                 <---------AHL20(2) <---------HSFB2a(2)               <-----------GT1 --->DOF2            ---------->DOF2    <---------MYB52(1)  <-----------GT1  <---------MYB52(1) <----   gcttctctaataacaaatgtcgttatagctcggtttaattctgttttttttttccagattataaaccccacttcaagtcgttttgtttaactaattagtg  4876100                                           ------->GAMYB                                        <----                                          --------->MYB46(3)                                   ------                                         ------>MYB83                                          <-----                  --------->AHL20(2)     ------>MYB46(1)                                       ------                  <---------AHL20(1)    ----------->RAV1(1)                                    <-----  ------->TEIL    <---------ARR11(3)    --------->MYB52(1)                         <---------WOX13(1) ---->ZAT18       --------->AHL20(1)   ------->GAMYB                             --------->ATHB12 >ATHB12       --------->YAB1         --------->MYB46(3)                        <---------YAB1 ------ -----ZAT18<---------WRKY38(1)   <----------DOF2                     <----------DOF2           <-----   gacgaaccatgagtcaacaatattttagaatttggctttaaccaacagacaatatttcttcaacatttgctctttcagtcatttgattggataacaatat  4876200            --------->ANAC46          <---------ALFIN1         <---------REM1(2) -----AHL20(2)                                                                                    <-- --->ARR11(3)                                                                                  ------ ----AHL20(1)                   <---------ANAC46                                               <----- --->AHL20(1)                   <---------ANAC58                                              <------ ----ARR11(3)             <---------YAB1 --------->AHL20(2)                               <---------ZAT6 --->AHL20(2)  ------->MYC3     <---------ANAC55(2)              <---------YAB1     <-----------GT1 ----AHL20(2)  <-------MYC3     <---------ANAC58          <-----------GT1   ----------->GT1   <------   atttgataggctacacacatggaccatttcgattacttgaaaatttaaaacgcgttctattgaccttctcattaggcattgtgaatttactagtgtataa  4876300                                                                                   ------->TEIL                                                                                   <-----------GT1                                 --------->YAB1                                    --------->ARR14(2)                                 <---------ICU4                                 --------->ANAC55(2)                       <-------TEIL --------->YAB1                              <---------ANAC55(2)                     --------->ARR14(2)                                      <---------YAB1     <---------YAB1  <---------ARR14(2)                                    --------->YAB1 ---------GT1     <---------ANAC46  <-----------GT1                --------->At5g28300 --->YAB1   <---------AHL20(2)  --------->KAN4(1)                 ----------->GT1  <---------ARR14(2) ----ICU4  --------->AHL20(2)  <---------KAN4(2)         ---------->DOF2  <---------YAB1 ---YAB1--------->ICU4--------->CCA1(2)               ------>ZmHOX2a(1) <---------ICU4 ---AHL20(2)--------->AHL20(2)--------->YAB1         --------->TOE2(3) --------->ICU4   ttacattgtgatatttaattgtggatacacaagaataatcacaattttagaacttcctaaaaagaacaccgtaaatattatcatgtatccacttattttt  4876400                                           --------->AHL20(2)                                           --------->AHL20(1)                                           <---------AHL20(2)                                    <-------GAMYB                                   --------->MYB55(2)                                   <---------MYB46(3)                                   ----------->GT1                                 <---------MYB52(1)                                 <-------GAMYB                                <---------DEAR3(2)                                <------MYB46(1)                               --------->MYB46(2)                               --------->MYB111(2)                               <---------DEAR3(1)                               <---------DEAR4(1)                               <---------DREB2C(2)         --------->ICU4                               <---------MYB46(3)          <---------YAB1    --------->YAB1                               --------->MYB55(2)  <---------ICU4          --------->ANAC46                              <---------ORA47(1)   --------->YAB1          ------>MYB83                              <---------MYB55(1) <---------YAB1            --------->ANAC58         <                             <-----------HVH21 <---------ICU4              --------->AtLEC2         <                             <-------GAMYB--------->AHL20(2)               ------>MYB46(1)          -                            <---------DEAR3(2) -------->ATHB1              --------->ANAC58   -------                            <---------SPL7<---------AHL20(2)      --------->YAB1 --------->ARR11(3)--                            <---------MYB46(3)<---------AHL20(2) <---------YAB1  --------->GLK1(2) <-                           <---------At1g77200--------->ICU4 <---------ARR11(3)  <---------ARR11(3)<-                           <---------DREB2C(2)--------->AHL20(2)--------->AHL20(2)        <---------AHL20(2)                <---------ANAC46<------MYB83  <---------ATHB51  <---------AHL20(2)    ----------->TBP   taaaaattcacttgagttttgtatagttgtcggtcggtggttaattaaattattaatgaccatgattttaataaaccaagcaaaatctatatataatggt  4876500  Previous    Next  AGI:  At5g15060.1    Description:  Identical to Putative LOB domain-containing protein 34 (LBD34) [Arabidopsis Thaliana] (GB:P59469); similar to LBD4 (LOB DOMAIN-CONTAINING PROTEIN 4) [Arabidopsis thaliana] (TAIR:AT1G31320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47085.1); contains InterPro domain Lateral organ boundaries, LOB (InterPro:IPR004883) Range:  from: 4874335    to: 4875952    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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