Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        ------>ZmHOX2a(2)                    --------->ARR11(3)                    --------->GLK1(2)                                --------->ANAC46                    --------->ARR14(2)                               --------->ANAC58                    <---------ARR11(3)                            <---------ZAT18                    <---------ARR14(2)                            <---------ZAT14                    <---------ARR14(3)                            --------->ZAT14 <-----------HVH21                    <-----------ARR10                             --------->ZAT18--------->O2                   <------ZmHOX2a(1)                        --------->ATHB12     <---------bZIP60(1)      <---------TOE1(2)                                    <---------YAB1        <---------O2      --------->SPL7--------->ARR14(3)                     --------->ICU4        --------->bZIP60(1)    --------->TOE1(2)<------ZmHOX2a(2)                 <---------MYB52(1)     ----------->HVH21    <---------SPL7----------->ARR10                   <-------GAMYB<---------AtLEC2          <------ZmHOX2a(2)  <---------------AtSPL3                             <---------ANAC46--------->ANAC58  <---------DEAR3(1)   tgagctcgtacgagtctgcgaggatcttcaaaacaggtttgaagaagttgaagtcccgttgatgattgtgcacggtagagacgacgtcgtctgcgatcca  4850400                                                                               <---------WOX13(1)                                                                              <------------CBF                         <-------TEIL                                        --------->ATHB12                      --------->At4g35610                                 <---------At4g35610                      --------->GLK1(1)                                 <-----------RAV1(2)                 <---------LBD16                                       <---------At4g35610               <---------WRKY18(1)                              <---------bZIP60(2)             <----------DOF2                               <---------LBD16--------->At4g35610             <---------DAG2                                --------->LBD16--------->ZAT2     <------ZmHOX2a(1)          <---------ARR11(3)                              <---------LBD16 <---------ZAT2  <---------At4g35610          --------->ARR11(3)   --------->At4g35610 <---------ARR11(3)--------->bZIP60(1)  --------->At4g35610   <-----------HVH21 --------->ARR14(2)            --------->ARR11(3)<---------bZIP60(1)<-----------RAV1(2)   --------->LBD16 --------->LBD16             ---------->DOF2  --------->ALFIN1      <-----------HVH21   gcctccgtcgaagagctttaccggagatgcagtagcagagacaagacgataaagatttatccagggatgtggcatcagctgattggagagtcagaggaga  4850500                                                       --------->ANAC46                                                 <---------GLK1(1)                                                 --------->GLK1(1)                                             ------>ZmHOX2a(2)                                     --                                            <------ZmHOX2a(2)                                      <-                                           <---------ARR11(3)             ---------->DOF2         ---              <------MYB46(1)              <---------ARR14(2)        <---------SPL7           -------              <------MYB83 <------------CBF--------->ARR14(2)       <---------MYB46(3)     <---------             <---------DEAR3(1)          --------->ANAC58     --------->YAB1     ---------->DOF2-----             <---------MYB46(3)          --------->ANAC58    <---------ATHB12 --------->TOE1(3)<-----   acgtcgacttggtgttcggtgatgttttggattggattaagacacgatctgaaatctccaccattcatggtggtaccaaagcttaaagtttgcatatata  4850600                                                                             <---------WRKY38(1)                                                                            <<<<<<<<<<WRKY6                                                                            <<<<<<<<<<WRKY11                                                               ------>ZmHOX2a(2)         <---------ATHB12                                      =================================HOX2a_HOX2a         <<<<<<<<<ARR2                                        ==================================HOX2a_HOX2a     ------------>CBF                                         <------ZmHOX2a(2)  --------->AHL20(2)                                         --------->ARR11(3) ------->AHL20(2)                      --------->ARR14(2)    --------->AGP1<-----------HVH21 --------AHL20(2)                      <---------ARR14(2)    <---------ARR11(3) ------>AHL20(2)                      <---------GLK1(1)      <---------GLK1(2) -->AHL20(2)           <---------AHL20(2)                    <---------ARR14(2)          ------>ZmHOX2a(1) --TBP --------->WOX13(1)  <------------CBF                  --------->ARR14(2)--------->At4g35610 ---->YAB1--------->YAB1 <---------AHL20(2)    --------->GLK1(2) ------>ZmHOX2a(1)      --------->TOE2(3) ----AHL20(2)         --------->AHL20(2)   --------->LBD16  <---------GLK1(1)<---------WRKY12    ----   ataaataaacaatcaaaattcaaattttatattggtatacaaatccgagaattttgtatttgagatcctcaagaataggtcaactaaaatcctaaattct  4850700                  --------->ICU4                ---------->DOF2                                                <---------TOE2(3)            <---------TOE1(3)                                            <---------AHL20(2)           <---------DOF5.7(2)                                         --------->CCA1(2)         --------->DOF5.7(2)                                          <---------ARR11(3)     <------------CBF                                             ---------->DOF2             ------- ------>DOF2<---------TOE2(3)                          --------->ZAT14--------->ARR11(3)     --------   aaagaaatattgttaacgaaaagatgagagtaagttctaatctcttgtggatgccactgaagaaaaatgaaagatataatgaaggaagtagaagggaaag  4850800                                <---------ANAC58                                <---------ANAC58                                <---------ANAC46                                <---------ANAC55(2)                         --------->YAB1                        <---------ATHB12                        --------->ICU4     --------->ANAC58               <---------ARR14(2)          --------->ANAC58                   ------>MYB83               --------->ARR14(2)        --------->MYB46(3)                   ------>MYB46(1)              <------NtERF2     <---------ANAC55(1)                  <------ZmHOX2a(2)            <---------ANAC58    --------->ANAC55(2)                  ===============================HOX2a_HOX2a            <---------ANAC58   --------->MYB52(2)                   <---------ARR11(3) -->DAG2    <---------ANAC46  <-----------GT1        ---------->DOF2--------->ARR11(3) -->DOF2   <---------LBD16 ----------->GT1 --------->ANAC46     ---------->DOF2              ------>ZmHOX2a(1)   tgaagttttcaatggcggattcgacaatgatgttacttgttcaacaagcaatggacaaagcccatgaaaagatcaaaaccaaacacggtcttctcctccg  4850900                                                                                                    <                        --------->ZAT2         <---------ZAT2                                       =                        <---------ZAT2         <---------At4g35610                                  =         <---------ARR14(2)                    --------->At4g35610         ----------->GT1   --------         --------->ARR14(2)     ----------->HVH21           <-----------RAV1(1)            --------->ARR14(2)        <---------CCA1(2) --------->ZAT18      --------->ZAT2  --------->ETT(1)            <---------ARR14(2)   tctcaatgccatatccattttctacgagctcgctgtgatacagctagagagctgtcttagttttgtcggacaagagactgataaactagagagtaaccac  4851000               ------>ZmHOX2a(2)              --------->CCA1(2)              <------ZmHOX2a(2)             <---------ARR11(3)             --------->ARR11(3)             <---------AGP1             --------->ARR14(2)             --------->AGP1             <---------ARR14(2)          --------->HSFB2a(2)          <---------HSFB2a(2)                  <---------CCA1(2)     <---------MYB46(3)                      --------->DEAR3(1)    --------->ALFIN1                      <---------ALFIN1                         --------->CCA1(2) ------ZmHOX2a(1)          ---------->DOF2--------->DEAR3(1)                  ---------->DOF2 =====================HOX2a_HOX2a         --------->AtMYB61           <---------ARR14(2) ====================HOX2a_HOX2a         --------->MYB46(3)           --------->GLK1(2)    <---------MYB46(3) ->MYB46(3) <---------GLK1(1)          --------->REM1(1)             <---------GLK1(2)   <-------GAMYB   gaggaagtggttcgagatctgagagagattaaagacaggcttcaccaccgtctcttagagactgaaatagcgattcttgagaaagatagacagttgttag  4851100                                                                       ===============HOX2a_HOX2a                                                                       ------>ZmHOX2a(2)                                                                     --------->ARR11(3)                                                                     <---------ARR11(3)                                                                     <---------ARR14(3)                                                                     <---------ARR14(2)                                                                     --------->ARR14(2)                                                                     <---------AGP1                              --------->ALFIN1                       --------->ARR14(3)                             <-------MYC3              <------MYB46(1)================HOX2a_HOX2a                             ------->MYC3---------->DOF2  <-------TEIL<------ZmHOX2a(2)                            <---------ANAC55(1)        <------MYB83  --------->AGP1              ----                            --------->ANAC55(2)        <---------MYB46(3)      <------ZmHOX2a(1)<----               <---------GLK1(2)      ----------->GT1<--------P  <---------AtLEC2     --------->GLK1(1)   agatgtctgagaaccaagagtctctgagaaacgtgttggagagtaaagaaacagagttggttcatttgcaagatcttgagaggaagagatttcatagtaa  4851200                   --------->At4g35610        <-------GAMYB                   <---------At4g35610  --------->ARR11(3)              --------->ANAC58          <---------ARR11(3)        <---------AHL20(2)       --------->ZAT2                            ---------->DOF2   <-------  <---------------------WRI1     <---------ZAT2                    --------->TOE2(3)         <------- ----->ATHB12 <---------TOE2(3)  <---------At4g35610             ------->TEIL               --------- -----YAB1    --------->ANAC58   --------->At4g35610          <---------YAB1            <------------   gattggggattttatcaaggaagatgagttttctgagctgaagagctctgttgatcaacaagtgatgaatcttagacaaaagcttgagacagagtacgat  4851300  Previous    Next  AGI:  At5g14980.1    Description:  esterase/lipase/thioesterase family protein. similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT5G19290.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82378.1); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073) Range:  from: 4849603    to: 4850586    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g14990.1    Description:  similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT2G34730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68951.1) Range:  from: 4850767    to: 4853006    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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