Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              ----------------->AGL1                                                            ----------->RAV1(2)                                                            <------NtERF2                                                            <-----------------AGL1                                                           <---------RAP2.3(1)                                                           ------>NtERF2                                                           <---------ATERF1(1)                                                          <---------DEAR3(1)                                                          --------->DEAR3(1)                                                         --------->ATERF1(1)                                                         --------->RAP2.3(1)                                                         <------NtERF2                                                        <---------RAP2.6(1)                                                        <---------ATERF1(1)                                                        ------>NtERF2                                                        <---------RRTF1(1)                                                        <---------DEAR4(2)                                      --------->MYB52(2)<---------RAP2.3(1)                                   <----------DOF2      <---------ERF1                                  ------>ZmHOX2a(2)     <---------ORA47(2)                                 <------ZmHOX2a(2)     <---------DEAR3(1)                                <---------ARR11(3)     <---------RAP2.3(2)                   <-------                                --------->AGP1         <---------RAP2.3(3)            <------NtERF2           <---------GLK1(2)    --------->ARR11(3)     <---------RRTF1(3)           <---------DEAR4(1)         --------->ANAC58       <---------AGP1       ------->GAMYB                  <---------DEAR3(1) ------>AtMYB61       ------>ZmHOX2a(1)       <---------bZIP60(1)                   --------->ETT(1) --->AtMYB61          ==================HOX2a_HOX2a --------->MYB46(3)            <-----------HVH21 -->MYB46(3)          ===================HOX2a_HOX2a----------->HVH21          <---------TOE1(3) >WRI1   --------->ANAC58<---------ANAC46     --------->GLK1(1)                <---------TOE2(3)   ccatctgtatcaagaaactcaatcctatcgtatagatctttagttgtgatatcaacgacggcgcctgaattggaatcgtttaagggtcggcgattaatat  4841500                                                    =============HOX2a_HOX2a                                                    ------>ZmHOX2a(2)                                     =====================HOX2a_HOX2a                ------>ZmHOX2a(2)    <------ZmHOX2a(1)         --------->ANAC58                ============================HOX2a_HOX2a        --------->ANAC58               <------ZmHOX2a(2)     ======================HOX2a_HOX2a               =============================HOX2a_HOX2a       --------->SPL7              --------->ARR14(2)   --------->ANAC58==============HOX2a_HOX2a              <---------ARR14(2)   --------->ANAC58<------ZmHOX2a(2)         ----------->HVH21 <---------HSFB2a(2)    --------->ARR14(2)       <---------ANAC58   ==================HOX2a_HOX2a     <---------SPL7       <---------ANAC46   ------>ZmHOX2a(2)       <---------ARR14(2)   --------->LBD16        ============================HOX2a_HOX2a  <---------ANAC58      <---------AGP1   --------->YAB1   ------>ZmHOX2a(1)                      <---  <---------ANAC58      --------->ARR11(3)       <---------GLK1(1)                      <------ZmHOX2a(1)  <---------ANAC46      <---------ARR14(2)       --------->GLK1(1)     --------->ALFIN1<XXXXXXXXXXXXX --YAB1<---------ANAC58 --------->ARR14(2)     <------ZmHOX2a(1)  --------->DEAR3(1) <------ZmHOX2a(1)   tcttccgtggcttgacgatccgattggatctggaggtaaggaatcgtgaggagatcggtcctggtacgccgaagtggaagagagtgaggaggaagaagag  4841600                 ----------->TGA1                 ----------->HVH21             --------->ZAT18          <---------ANAC58          <---------ANAC58         <---------MYB46(3)       --------->At5g28300      <---------ANAC46                            <---------WOX13(1)   ----     <---------DEAR3(1)        <------NtERF2                    <---------ANAC58                <---- ---ZmHOX2a(1) <---------At4g35610                              <---------ANAC58              <------ XXXXXXXMIR847 --------->At4g35610                              <---------ANAC46 ------>ZmHOX2a(2)   gagtgagacggtgagtgcgatgacgaagaagttggcgaagatgaaattgactacgagagttcgttttcgtggttttcgattgatcgctagttttgacttt  4841700                                                                         --------->CCA1(2)                                                                       <---------RAP2.6(3)                                                                <-----------RAV1(1)                                                                <---------MYB46(3)                                     --------->ARR14(2)       <------NtERF2                                     <---------ARR14(2)       <-------GAMYB                                    <---------MYB52(1)        <---------At4g35610                                   <---------ATERF1(1)        --------->At4g35610                                   <---------MYB46(3)        <---------RAP2.3(1)                                   <---------DEAR3(2)        <---------ATERF1(1)                                  <---------DEAR3(1)         ------>NtERF2                  <--------                                --------->MYB52(1)           <---------MYB46(3)             ---------                               --------->DEAR3(1)           <---------RAP2.3(3)             ---------                               ------->GAMYB   <---------DEAR3(2)    <---------ANAC46      --------->KAN4(1)                              <---------MYB55(2)            <---------RAP2.6(2)            <---------KAN4(1)                              --------->DEAR3(2)     <---------At4g35610<---------ARR14(2) <---------                              <------------AtMYB77   --------->At4g35610--------->ARR14(2)<---------KAN4(2)                              --------->MYB46(3) --------->ALFIN1--------->At4g35610      ---------->TaMYB80                             -------->P       <---------ATERF1(2)<---------At4g35610  --------->ANAC58                             ------>MYB83  --------->DEAR3(1)<---------ERF1  <---------TOE1(1)                             ------>MYB46(1)--------->LBD16 <---------RAP2.3(2)       --------->ANAC58                            --------->MYB52(1)<---------DEAR3(1)--------->MYB55(2)   --------->RAP2.6(3)      <-------GAMYB         <---------ALFIN1------>NtERF2<---------DEAR3(1)--------->CCA1(2)<-------- ----->YAB1                --------->MYB46(3) --------->ATERF1(2)<-------GAMYB      --------->MYB52(1) -----YAB1                 <---------ALFIN1--------->ANAC46 <---------DEAR3(1)   <------ZmHOX2a(1) -- ----DOF2                 <------NtERF2  ------>ZmHOX2a(1)<---------RAP2.3(1)<---------TOE2(1) <-----   gataacgctgttggaagaagagattggccccaaccgccggttcctccgccggtggagctacggcggctgttgccgatatacgaggagaacggcatattct  4841800      <---------GLK1(2)   --------->ANAC46  --------->LBD16  ------>ZmHOX2a(1)  <---------LBD16  --------->HSFB2a(2)                       --------->ANAC46 -GLK1(2)                                  ------>MYB83 >KAN4(2)                                  ------>MYB46(1)                    <---------ANAC46 >ARR14(2)                               --------->TOE2(2)                    <---------ANAC58 -TaMYB80<-----------GT1                 --------->TOE1(2)                    <---------ANAC58      < -ARR14(2)   <----------DOF2  <---------TOE2(3)     <---------ANAC46   <----------DOF2  <---------At4g35610 ---->ZmHOX2a(1)   <----------DOF2  --------->AHL20(2)          <----------DOF2         <---------ZAT14 ------GT1   <---------DAG2  --------->MYB52(1) <---------DEAR3(2)  <-----------GT1     --------->ZAT14   cctcctcggaatttcctttttcttttctatctaacgaattaaacctacgtcgtttcgagttgtcttcttttttctttcttacttgtgttctgctctgaga  4841900                                                                                             <-------                                                                                             <------MYB83                                                                                             <------MYB46(1)                                                        <------MYB46(1)                      <-------                                                        <------MYB83                  <<<<<<<<<<<<<<<                                    <----------DOF2  <---------MYB52(1)               >>>>>>>>>>>>>>>                           <-------TEIL        <---------ARR11(1)                --------->AHL20(2) <                          --------->ARR14(1)   --------->ARR14(2)            ---------->DOF2---------      --------->At4g35610--------->ARR11(1)    --------->GLK1(2)         <---------TOE2(3)  <--------      <---------At4g35610<---------GLK1(2)   *TSS  ------>ZmHOX2a(1)     <---------TOE1(3) --------->ALFIN1 ---------TOE2(3)  <----------DOF2------->TEIL <---------ARR14(2)---------->ID1----------->GT1  <----   tttatgtaagcggatgatggtcttttagattcgatggacttttcttccgaatcctgtttggttttttgtttttttaagggaaagtaaatgccagtgggtg  4842000                                                                       <-----------RAV1(1)                                                                   <---------ARR14(2)                                                                 <---------DEAR3(2)     <----------DOF2                                             <---------MYB46(3) --ANAC58                                                        <------MYB83 --ANAC58                                           <---------DAG2<-------GAMYB <<LFY                <---------DAG2                <----------DOF2<---------MYB52(1) >>LFY          --------->ANAC46                 <-----------GT1 <------MYB46(1)              <------ ---------AtMYB61     <----------DOF2         ----------->GT1   <---------DEAR3(1)         <---------ARR11(3) >MYB55(2)      --------->ANAC58          <------MYB46(1)      <--------P      <---------ANAC46 -MYB46(3)      --------->ANAC58          <------MYB83        ------------>AtMYB77         --------->ARR11(3) ---GAMYB    <---------SPL7             <--------P <-----------------AGL3 <---------ANAC46<---------CCA1(2)   ttatggtcttttcgacatacgctacttttttttaaggcccaagttggtgagtaactttttttggggtcggttactgttgtggagtaagtctagtatcttt  4842100                                                        <---------AHL20(1)                                                    --------->YAB1                                                    <---------ICU4                                                   <---------YAB1                                                 -------->HAHB4                                                 --------->ATHB51                                                 -------->ATHB1                                                 <--------HAHB4                                                 <---------AHL20(2)                                                 <---------ICU4                                                 --------->YAB1                                                <---------ATHB51                                                --------->ICU4                                                <---------YAB1                                              --------->YAB1                                              <---------ICU4                                             <---------YAB1                                             --------->ICU4                                            <---------AHL20(1)                                            <---------AHL20(2)                                            --------->AHL20(2)                                            --------->AHL20(1)                                           <---------ICU4                                           --------->YAB1                                          --------->ICU4--------->AHL20(1)             --------->TOE2(3)                                          <---------YAB1<---------AHL20(2)            --------->YAB1                                        --------->YAB1 --------->AHL20(2)             <--------HAHB4           --------->ICU4              <---------YAB1  --------->YAB1                 --------->ATHB12       <---------GLK1(2)               <---------AHL20(2)<---------YAB1              <---------YAB1<-     <---------TOE2(3) --------->TOE1(3)<---------ICU4<---------YAB1             ----------->GT1  --- ----DOF2  <---------YAB1            --------->YAB1--------->ICU4             <---------AtLEC2   ----   actggtttagattattattagataaccctaaggtcagttttataattataattattattatatttaagagtttaatatttgtatggtatcattagaaaat  4842200            <---------ICU4           <---------ATHB12         --------->WOX13(1)         --------->YAB1                    <---------AHL20(1)       <---------YAB1                      --------->AHL20(2)     -------->ATHB1                        <---------AHL20(2)     <---------ICU4                        --------->AHL20(1)    --------->AHL20(1)             -------->HAHB4    --------->AHL20(2)             --------->YAB1    <---------AHL20(2)            <---------YAB1<---------ARR11(3)                            <------    --------->ICU4                <---------ATHB12                                     <---------ARR11(3)    <---------YAB1--------->ARR11(3)   <---------AHL20(2)                              <---------AHL20(1) -----ZmHOX2a(1)  <---------ARR11(1)  --------->AHL20(2)                  <---------DAG2--------->AHL20(2) -------->GT1    <---------CCA1(2)--------->ICU4--------->ARR11(3)        <----------DOF2   --------- ------->GT1--------->YAB1       <---------TOE2(3)                     <-----------GT1 --------->AHL20(1)   aggaaaattattaatcatcaaatctttgaaagactaatgataaaatttattatcttatagtataactaaattttgactttttgtttcaaaatatttataa  4842300                  <---------ARR11(3)                  --------->ARR11(3)              ---------->DOF2              <---------DOF5.7(2)            --------->DOF5.7(2)                              --------->ANAC55(2)               ------    --------->GLK1(1)                                        <---------ANAC55(2)               <-----   --------->ARR14(2)                            <---------STY1(2)                   --------->TOE2(3)   <---------ARR14(2)                            --------->STY1(2)                  <---------ICU4 ---YAB1   --------->TOE1(3)                   ------>ZmHOX2a(1)                    --------->ATHB12 >YAB1     --------->TOE2(3)            ---------->DOF2  --------->ARR11(3)        <---------YAB1   atgcagatttctacgttaaaggtctaaaaaaacaatttctgcaaaagtcctagctagatgatcacgttttacatacaactaaaacatcattagaacatgt  4842400  Previous    Next  AGI:  At5g14950.1    Description:  ATGMII/GMII (GOLGI ALPHA-MANNOSIDASE II); alpha-mannosidase. similar to glycosyl hydrolase family 38 protein [Arabidopsis thaliana] (TAIR:AT5G66150.1); similar to hypothetical protein OsI_021571 [Oryza sativa (indica cultivar-group)] (GB:EAZ00339.1); similar to glycosyl hydrolase [Arabidopsis arenosa] (GB:AAR15492.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14877.1); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding; (InterPro:IPR011013); contains InterPro domain Glycosyl hydrolases 38, C-terminal; (InterPro:IPR011682); contains InterPro domain Glycoside hydrolase/deacetylase, beta/alpha-barrel; (InterP Range:  from: 4837155    to: 4841945    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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