Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <-----------RAV1(1)                                                        <---------MYB46(3)                                                    <---------YAB1                                                   <---------AHL20(1)                                                   <---------AHL20(2)                                                   --------->AHL20(1)                                                  --------->YAB1                                                  --------->AHL20(2)            --------->ATHB12                     <---------YAB1            <---------ICU4                     <---------ICU4            --------->ATHB51                   --------->YAB1         <--------HAHB4                       <---------YAB1         <---------ICU4                       --------->ICU4         --------->YAB1                     --------->ATHB51                                       --        <---------YAB1                      -------->ATHB1                             <---------AHL20(2) ---------PCF5                              <---------ICU4                  <-------TEIL      <------ --->MYB52(1)                               --------->YAB1             --------->AHL20(2)  <---------ICU4 ---->DOF2 <---------YAB1                   <--------HAHB4          <---------TOE2(3) --------->AHL20(2) --MYB52(2)--------->ICU4                  --------->ICU4         <---------AHL20(2)------->TEIL <---   agggaccactatcattattgcattttagatgttagtataaattgaattattattatatttgttggaaatttatgtaaatacatatgtatttaatatttat  4776500                         <---------ARR14(2)                         --------->ARR14(2)                                  <---------ARR11(3)                        <------ZmHOX2a(1)                          <---------AHL20(1)               <<<<<<<<<MYB98    <---------AHL20(2)                <---------AHL20(2)              ----------->GT1   --------->AHL20(2)       --------->ATHB12    --------->ARR11(3) --------->RAV1(2)  ---------->DOF2             >>>>>>>>>TBF1      --------->AHL20(1) -----GT1    ----------->GT1    <---------AHL20(2)      <---------YAB1      <---------GLK1(1)       < --------GT1--------->AHL20(1) <---------WOX13(1)     --------->YAB1        --------->GLK1(1)  <-----   cacctgttagaaaatatgttaaaaaaggatttgatttattttttgttgaagaagaaacatgatttctaaaatatttggaaatctttgattctggtttata  4776600                                                                                   --------->TOE1(3)                                                                                   <---------MYB59                                                                                   --------->TOE2(3)                                                           <------ZmHOX2a(1)---------->DOF2                   ----------->GT1               <---------YAB1          <----------ID1                   <------MYB46(1)              <---------ARR11(3)    ---------->DOF2                   <------MYB83                 --------->ARR11(3) --------->AHL20(2)                  --------->MYB59              --------->CCA1(1)   --------->YAB1------->TEIL  ------ ----------DOF2 >>>>>>>>>CBP60g                --------->RVE1(1)--------->WOX13(1) <---------DAG2  -- ------GT1      >>>>>>>>>SARD1         <---------ZAT6    ------------------------>ANAC81   ----------   cactttgtatcaatggaaatttggtaaaattggatttgtcagtgtgaaaatatcatggagaggaatcaattaaaaaggaaaagaaccttaccaaaaagaa  4776700                                                 --------->ANAC58                                           <---------------AGL15                                           --------------->AGL15                                          <-----------------AGL3                         ------>ZmHOX2a(1)                                          ===========================================MADS_MADS     ---------->DOF2                  <---------DAG2---------->DOF2                     --------->TOE2(3) ----------->GT1                      <----------DOF2                                   --------->TOE1(3) ---->DOF2                          <---------At4g35610                        <-----------GT1 -------->DOF2   --------->AHL20(2) --------->At4g35610 <------ZmHOX2a(1)   ----------->GT1 >DOF2        <-----------GT1--------->ZAT14     --------->ANAC58    --------------->AGL15         <-   agaaagtaaaagaatataactaaatagacattacagtcagcttttctaaacaaggaaaggatagacttatacatgaattagtaactatttccttagaatt  4776800                                                                                        --------->ALFIN1                                                                                       <-------MYC2                                                                                       ------->MYC4                                                                                       ------->MYC3                                                                                       <-------MYC3                                                                                       ------->MYC2                                                                                       -------->ABF1                                                                                       <-------MYC4                                                                                       ------->PIF5                                                                                       <-------PIF5                                                                                      --------->O2                                                                                      --------->TGA1a                                                                                      ===============                                                                                      <---------O2                                                                                      <---------TGA1a                                                  ---------->DOF2                     --------->ANAC55(2)                             --------->ANAC58     ==============================================bZIP_DOF                             --------->ANAC58 <---------ICU4                          --------->ANAC46                             <---------ANAC55(2) --------->AHL20(2)           <---------RAP2.6(3)                             --------->ANAC55(2) <---------AHL20(2)          --------->RAP2.3(3)               --------->MYB52(1)    <---------ICU4       <---------TOE2(3)  --------->RAP2.3(2)     <---------AHL20(2)      ----------->GT1  <--------HAHB4                 --------->DEAR3(1)   <---------RVE1(1)     <-----------HVH21   --------->ICU4                 --------->ATERF1(1)  --------->ARR11(3)  <---------ANAC58       <---------YAB1                 --------->RAP2.3(1)  <---------ARR11(3)  <---------ANAC58    <---------YAB1 --------->MYB52(1) <------NtERF2<-----------HVH21 --------TOE2(3) --------->ZAT6  >>>>>>>>>MYB98 <---------YAB1             <---------At4g35610     --   caaggattttttttgtctaacagtacttgtcaagtaacataagtacgataattaaagtctaacgatgatgtctatggagccgtcttacacgtggcacagc  4776900                                   <---------ANAC58                                   <---------ANAC58                                   <---------ANAC46                                ------->PIF5                               <---------ZAT2                               --------->At4g35610                               <---------At4g35610                               --------->ZAT2                         <------MYB46(1)                         <------MYB83                         <---------ANAC58                         <---------ANAC58                        --------->MYB111(1)                        =================RAV                    --------->ATHB12                   <---------AHL20(2)                   <---------YAB1--------->ALFIN1      --------->AHL20(2)             ---------->DOF2 <-----------RAV1(2)---------->ID1        --------->LBD16 <-----------RAV1(1)   <---------ANAC58     --------->At4g35610  --------->ANAC46 =======================bZIP_DOF<-------PIF5  *TSS ------>ZmHOX2a(1)      <---------ATHB12 ------->GLK1(2) <------ZmHOX2a(1)<-------TEIL<---------ANAC58------>ZmHOX2a(1)       --------->ANAC46   tattctggtccgaagaaaaggatgatttggtgcaggtgcgtgaacatttcgtcctatataaatcctctcatctccaattactgatttcacacaaaacaaa  4777000                                                                       ------->GAMYB                                                                <---------TOE2(3)                                                               ---------->DOF2                                                             <----------CDC5                                                            --------->At4g35610<---------ANAC58                 ------>MYB46(1)                        --------->ANAC46 ========================HOX2a_HOX2a                 ------>MYB83           <---------ATHB12--------->ANAC58 <------ZmHOX2a(2)               <---------MYB59          --------->MYB46(3) --------->RAP2.6(2) <---------ANAC58    <-            <-----------GT1 <-----------GT1             --------->ANAC58<-----------HVH21       <<<<<    --------->AtMYB61      <-----------GT1         <----------ID1     --------->MYB46(3)  ------>ZmHOX2a(1)   aatcgaccaaagagtaaccaaattgatatttatctcttctcaaccatggcgatgagacaagccgctaaggcaacgatcagggcctgttcttcctcttctt  4777100                            ----------->GT1                           <---------TOE2(3)                   <---------MYB52(1)                   --------->TGA2(2)                  <-----------HVH21                  <-----------TGA1--------->YAB1                 <---------O2     <---------ICU4                 --------->O2     <--------ATHB1                 --------->ANAC46<---------YAB1                 --------->bZIP60(1)                               <---------TOE2(3)                 --------->TGA1a --------->ICU4              <---------YAB1                 ================================================bZIP_DOF          <---------ARR11(3)    <--------P   <---------TGA1a <---------ATHB51          <-----------GT1     ----------->GT1    =======================MYC_MYB-------->HAHB4      <----------DOF2          <------MYB46(1) --------LBD16   <---------bZIP60(1)                  <---------DAG2           <------MYB83 <<<<TBF1        --------->bZIP60(2)          ------>ZmHOX2a(2)    <---------TOE1(3)--------->ICU4   cttcgggttacttcgctcgacgtcagtttaatgtaataattctttcgatctctctcctttttcacgattaaggttctaagttggtgatatttatagtttc  4777200                                                   <---------ARR14(2)                                           <------MYB46(1)                                           <------MYB83                                          <---------MYB46(3)                                          --------->MYB46(2)                                          --------->MYB111(2)                                  <-----                                         <---------MYB52(1)                                <---------DAG2                                         <--------P--------->ARR14(2)                    ---------->ID1                                         <---------MYB55(1)                          <----------DOF2                                        <-------GAMYB         <-----------RAV1(1)   =================           <---------ANAC46            <---------MYB46(3)     --------->ALFIN1      ------>ZmHOX2a(2)           ----------->GT1            <---------ANAC58      <---------ANAC58      --------->ARR14(2)          --------->ALFIN1            <---------RAP2.6(2)   <---------ANAC58      --------->ARR11(3)        <---------ANAC58              <---------ANAC58      <---------ANAC46      <---------AGP1 ----        <---------ANAC46      <---------At5g28300 --------->DOF5.7(2)             <---------ARR14(2)        <---------ANAC58     <-----------GT1  <---------DOF5.7(2)                 <---------ARR11(3)      <---------ANAC46<----------DOF2<---------LBD16  <---------YAB1             <---------CCA1(2)   tcagagttttgtgtggtgatttcgcttgattttactgtttgcggttggtaacgtttccgattgtgtgtgggatagatgtttttggatctttggccttatg  4777300                                                                                          <----------                                                                                          -----------                                                                                    --------->ALFIN1                                                                                   <-------MYC3                                                                                   --------->TOE1(2)                                                                                   ------->MYC3       <---------GLK1(1)                                                          ===================       --------->GLK1(1)                                                          <---------ANAC55(1)       --------->CCA1(2)                                                          <---------ANAC58      <---------ARR11(3)                                                          <---------ANAC58      --------->ARR11(3)                                                          <---------ANAC46      --------->ARR14(2)                                                          ===================      <---------ARR14(2)                                                          --------->TGA1a     <------ZmHOX2a(1)                                                            <---------O2   <---------TOE1(3)                                                              --------->O2      -   <---------TOE2(3)                  <---------YAB1                              =================== ----YAB1--------->AtLEC2 --------->HSFB2a(2)                                     <---------TGA1a  <- ===========HOX2a_HOX2a   <---------HSFB2a(2)         <---------YAB1      <---------WRKY18(1)    ---- ----->ARR11(3)         <---------ANAC46            --------->CCA1(2)  <---------AtLEC2  ------------   attttgaggatatgcaaattttggttttgtagaacctattttgattttgttgtgatatgatcagactgactgtgcatgactgaaacgtgtgactaaaatt  4777400  Previous    Next  AGI:  At5g14780.1    Description:  FDH (FORMATE DEHYDROGENASE); NAD binding / binding / catalytic/ cofactor binding / oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor. Identical to Formate dehydrogenase, mitochondrial precursor (FDH1) [Arabidopsis Thaliana] (GB:Q9S7E4); similar to PGDH (3-PHOSPHOGLYCERATE DEHYDROGENASE), phosphoglycerate dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G17745.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71454.1); contains InterPro domain D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; (InterPro:IPR006140); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domai Range:  from: 4776946    to: 4779497    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version