Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <----------DOF2                                                                <---------ANAC58                                                                <---------ANAC58                  --------->ANAC46                         <---------ICU4                  --------->ANAC55(2)                     <---------ATHB51 ---YAB1          --------->YAB1     ----------->GT1      --------->ICU4--------->HSFB2a(2)         < >CCA1(2)   <----------DOF2        ---------->DOF2    <------ZmHOX2a(1) <---------HSFB2a(2) ---------   gtagattggaatttctttatacataattttgtttttctaaagtaaaaacatatagaggaaattatggcctactttcagaaggttttggctaaaaaaaaga  4710200                                      --------->DAG2  ------>MYB83                       ---------->DOF2                                 ------>ZmHOX2a(1)  ------>MYB46(1)               ----------->RAV1(1)         <---------YAB1           <---------YAB1 ---------MYB59              <------ZmHOX2a(1) --------->AHL20(2)             ------>ZmHOX2a(1)   <-- ->DOF2                 --------->CCA1(2) ----------->RAV1(1) --------------------->WRI1       <-----   aaccaaacttatatagagagatagagatttaggacaacaaaaagcaccatataatataagttttcattgttcatatagtcctaaatcctaattagttatg  4710300                         <---------YAB1                       <---------GLK1(1)                      --------->ARR14(2)                            <---------At4g35610                      <---------ARR14(2)                           --------->ARR14(2)                 <---------AtLEC2                                  ------->TEIL                 <---------ANAC46       <---------ANAC58          <---------CCA1(2)               ---            --------->ARR14(2)          <---------ANAC46   ------>MYB83                          ----            --------->GLK1(2)           <---------ANAC58   ------>MYB46(1)          <---------ATHB12 --------DOF2  <---------YAB1        <----------DOF2  <---------WRKY18(1)         --------->WOX13(1) ----YAB1   <---------ARR14(2)    <-----------GT1  <---------AtLEC2<---------ARR14(2)      ------->TEIL   cttttgtttctgcaattctgcttggatatgtttgtataactttcttgtaatttggatgaccaactattgtatctgatttcatatcaatgaatgaatcaga  4710400                                                                                     --------->At4g35610                                                                                    --------->ANAC58                                                                                    --------->ANAC58                                                                                  --------->CCA1(2)                                                                               <---------TOE2(3)                                     --------->ICU4                            <---------YAB1                                ----------->GT1                      --------->AHL20(2) -------->GT1               <---------ZAT14                   <---------PCF2   <---------TOE1(3) ------->GT1                --------->ZAT14         --------->YAB1   <---------AHL20(2)           ---   tgttaaaaaaaaaaaacttgattcaatctgtatagagtgatttttaagggactacaataacatgggcccaaataaatgtttaagataagctaagagaaga  4710500                      <---------PCF2                      --------->PCF5                                --------->DEAR3(2)                      <---------PCF5                               --------->MYB52(1)           <------ZmHOX2a(1)       <---------------AGL15          *TSS         <---------TOE2(3)         <---------YAB1       --------->At4g35610   --------->GLK1(1)        --------->YAB1--------->PCF2         ---------->DOF2      --------->MYB52(1)                -       <---------ATHB12           <---------AHL20(1)    --------->ZAT2    --------->ANAC55(2)       -   ------------>CBF   <---------ZAT18   ---------->DOF2 <---------At4g35610   <---------GLK1(1)     -   <---------------AGL15          <---------AHL20(2)    <---------ZAT2    --------->ANAC58     <-----  <-----------------AGL1          --------->AHL20(1)   ------->TEIL------->TEIL  <-----------GT1  <--  =================================================MADS_MADS    <---------MYB52(2)         <---------DAG2  <-----------------AG--------->ZAT18  <---------AHL20(2)<---------ANAC46 --------->ANAC58 <--------- ------->DOF2<------------CBF     --------->AHL20(2)<---------REM1(1) <-----------HVH21------>ZmHOX2a(1)   ttaagcccaataaggaattgagagggccctcgatattatattaaaagaaaagaaatgtagctggaaacgaaccggcacggatttcactccttacttttct  4710600  --------->ZAT14  <---------ZAT14           ------>ZmHOX2a(1) -------->ANAC46        <---------ARR14(2)     <---------ZAT6 -------->ANAC58        --------->ARR14(2)  <------NtERF2 -------->ANAC58     <---------ANAC58     <---------ANAC58         <---------ARR11(3) ------GT1           <---------ANAC58     <---------ANAC46         --------->ARR11(3)   <----------DOF2 -------ALFIN1<----------DOF2        <-----------RAV1(1)         --------->MYB59    <-----------GT1 -DOF2  ----------------------->TaNAC69(2)<---------ANAC58 <------ZmHOX2a(1)<----------DOF2   ccactccagtctctctcttttctgcgtttcctcttctctctgtggcgtagagttatagagaggaatttaggtcttcttctttggtttttcctttgctctt  4710700                               <---------ANAC58                               <---------ANAC58                              <-------TEIL                <-----------GT1      <---------ANAC58 <----                            <---------GLK1(2)        --------->REM1(1)         <---------ANAC58 -----                  --------->At5g28300               ------>MYB46(1)       <-----------GT1      <-----             <---------ETT(2)<---------ARR14(2)     ------>MYB83     <---------MYB52(1)     <--------             --------->ETT(2)--------->ARR14(2)   <---------MYB59  <---------ANAC58         ---------  <---------YAB1 ----------->GT1           <---------ANAC46        <---------ANAC58  <---------RAP2.6(3)   cattctcatactctctcgacagtgaaatcaggttcttgttttttttcgtagacctacatttttcgaatttcgtttttttcttcgtgccgaaatgtcgata  4710800                 --------->SPL7                                    <---------ARR14(2)               <---------SPL7                                      --------->ARR14(2)   <----------DOF2                            <-------TEIL   --------->TOE2(3) -----ARR11(3)<---------ANAC58    <---------ANAC46        <-----------GT1 ---->ARR11(3)<---------ANAC58   <---------LBD16      <---------AHL20(2) ----GLK1(1) --------------->AtSPL8        --------->At4g35610------>ZmHOX2a(1)              -------- -ETT(2)     --------------->AtSPL3        <---------At4g35610<---------MYB52(1)         <---------MYB46(3) >ETT(2) <----------DOF2     <---------MYB46(3)      <---------AHL20(2)                <---------MYB52(1)   tctctctttgtctttgccgtaccattttctgtagttggggattttagctgcattttttattttccttaggttctgggttatatttctctgtttgttagtg  4710900                                                                 <-------GAMYB                                                                <---------ANAC46                                                                <---------ANAC58                               ------->TEIL                     <---------ANAC58    <---------ANAC46                               <---------ARR11(1)         <-----------RAV1(1)     <---------ANAC46                               --------->GLK1(2)          ===============================RAV                               <---------ARR14(2)  <---------TOE1(3)             --------->ALFIN1                               --------->ARR14(2)  <---------TOE2(3)             <---------AtMYB61 ->MYB52(2)         --------->MYB52(1)      <---------AtLEC2   <------NtERF2 ----------->RAV1(2)  ---   tcttctcttgttgtctgaagagtaacgaggtcgaatctgttcttctgcatgttagggtttttgttggcgttgtgtctcaacctgtggtgtaatgagataa  4711000                                                       <---------ANAC58                                                       <---------ANAC46                                                       <---------ANAC58                                                     <---------ANAC58                                                     <---------ANAC46                                                     <------MYB83                                                     <------MYB46(1)                                                     <---------ANAC58                                                    --------->MYB111(1)                 --------->DAG2                     <---------AtMYB61                         -------       <----------DOF2                  <---------ANAC46         --------->HSFB2a(2)         --------      <---------DAG2                <----------DOF2 <---------MYB46(3)                   <---------HSFB2a(2)  --------->GLK1(1)       <----------DOF2--------->LBD16 <---------ANAC46                --------->HSFB2a(2) ------>YAB1    ---------->DOF2---------->ID1       --------->MYB46(2)               <----------DOF2<   tcagagacccttttgtgaaaaagtttcgcttttgtcttctttccgtctatatgtttggtgtgtgtttctcgacttaaaaaatccatgctttctggtaaag  4711100  Previous    Next  AGI:  At5g14610.1    Description:  ATP binding / ATP-dependent helicase. Identical to DEAD-box ATP-dependent RNA helicase 46 (RH46) [Arabidopsis Thaliana] (GB:Q9LYJ9;GB:Q0WQ84); similar to DRH1 (DEAD box RNA helicase 1) [Arabidopsis thaliana] (TAIR:AT3G01540.4); similar to DRH1 (DEAD box RNA helicase 1) [Arabidopsis thaliana] (TAIR:AT3G01540.1); similar to DRH1 (DEAD box RNA helicase 1) [Arabidopsis thaliana] (TAIR:AT3G01540.3); similar to Os01g0172200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042151.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14745.1); contains InterPro domain Helicase, superfamily 1 and 2, ATP-binding (InterPro:IPR014021); contai Range:  from: 4710566    to: 4715072    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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