Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->At4g35610                                                                      <---------At4g35610               <------ZmHOX2a(1)                                     --------->GLK1(2)            <--          --------->STY1(2)                                        --------->HSFC1(2)             <--          <---------STY1(2)                                        <---------HSFC1(2)           <----          --------->ZAT2                                       --------->ANAC58        --------->ZAT14          <---------ZAT2                                       --------->ANAC58        <---------ZAT14         ------>MYB83  --------->ZAT6            --------->AHL20(2)--------->HSFB2a(1) --------->ZAT18         ------>MYB46(1)                     <---------TOE2(3) --------->ANAC46        <---------ZAT18   aagtaaaaacctagctaggaacataacacaatctcgatatcaattctaagataaattgacaaaacacgaagcatctgaaaaaaacctagtgcacacatat  4684000                                             ---------->DOF2         --------->YAB1                 <---------TOE2(3) <---------WRKY18(1)                    <---------TOE1(3)                                           - -------ANAC58                   --------->DAG2                  --------->TOE2(3)                  < -------ANAC58                  ---------->DOF2     ---------->DOF2                        <---------ARR11(3) -----YAB1                 ----------->GT1<------ZmHOX2a(1)    ------->TEIL<-------TEIL    --------->ARR11(3)   gcttgtccgaacaataactcgaagaaaaacagtgaaaagttgaaggataaagaagaaagagagtgaacctgaatagattcaagttaacttgaagatgttt  4684100             <-----------HVH21 <---------GLK1(1)         <---------ZAT2        --------->GLK1(1)                               <---------At4g35610      ----------->HVH21       <----------DOF2                               <-------TEIL  <---------ANAC58          --------->LBD16                              ------>MYB83       ---------  <---------ANAC58         --------->RAP2.6(2)                           ------>MYB46(1)  --------->ANAC58 -------->ARR11(3)      ------>MYB46(1)        <-----------GT1         <---------MYB59    --------->ANAC58 ---------ARR11(3)      ------>MYB83       <----------DOF2       --------->YAB1--------->At4g35610   aagagcttgcgacctggtcatatacctagccgcatttccttccttctttttcccctacaaatgacaaacataaccaaattcatctcagaaacaagaaaga  4684200 --------->ZAT2 <---------ZAT2                ----------->GT1                                            ---------->DOF2 --------->At4g35610      ---------->DOF2                  --------->MYB52(1)            --------->YAB1 <---------At4g35610 --------->MYB52(1)            <---------MYB46(3)                   <---------ATHB12 ->DOF2             ---------->DOF2          ----------->RAV1(1)     <---------LBD16  --------->WOX13(1)   accagctccaaagtttttcgagcaaagggaaagacgaaaatagattacaacagttgttgaacaacgaatattggggagaatagagcttcaatcaaagaga  4684300                                                                          ---------->DOF2                                                                       <------ZmHOX2a(1)          <------MYB46(1)                 ----------->RAV1(1)        ------------------------>ANAC81          <------MYB83                    ------>NtERF2              ----------->GT1         <---------AtMYB61               --------->DEAR3(1)       <------NtERF2        <---------MYB52(1)            --------->ANAC58           --------->LBD16       <-------GAMYB                  --------->ANAC46         <---------LBD16    <---------At5g28300       ----------->GT1                 <---------ANAC46               <------- --------->ANAC58          <---------AtLEC2                  <-----------------------TaNAC69(2) --------->ANAC58  --------->ICU4     --------->ANAC58      --------->CCA1(2)                <-------   aacactcaccgttggtctgtaatgcttcggcatggtgaaaacgccaccagagaaggaacgagagacgcggagaggaaaaagagagacagagaattagggt  4684400                                                                                        <-----------GT1                         <------NtERF2                                                --------->YAB1                       <---------LBD16                                        <---------TOE2(2)       *TSS           --------->ALFIN1     <---------AHL20(2)                 <---------TOE1(2) --TOE1(3)        ---------->DOF2   <------ZmHOX2a(1)                        <-----------RAV1(2)  <-- --TOE2(3)   ----------->GT1 <-------TEIL --------->AHL20(2)       <-----------GT1   <---------YAB1   tttagccaaaacgatttgttaaaagtcggggtacaagaggacgatataatgggcttcttatgacctatttgacttcttctcaggtttattataccatggg  4684500                                                                  <---------ARR11(3)                                                                  --------->ARR11(3)                                                            <---------ANAC58                                                            ----------->GT1                                                            <---------ANAC58                                                            <---------ANAC46     <---------ANAC46                                                       <---------YAB1            <---------ANAC58                                                    <------ZmHOX2a(2)            <---------ANAC55(1)                                                   --------->ARR11(3)            <---------ANAC58                           <---------MYB46(3)      <---------ARR11(3)            <---------ANAC55(2)          --------->ARR14(2) ---------->ID1       <------ZmHOX2a(1)  <----------DOF2            -----       ------------>CBF  <---------ANAC46  <---------YAB1  <-------TEIL          --------->ANAC55(2) --------DOF2   <---------YAB1             <---------AHL20(2)    --------->GLK1(1)          <--------   cttttaaggcccaatatgctcattgttgtttgttcttctgggttttttattaggatcatggttcgtgaaatcttttccagtttacgtgaacattgatgta  4684600                     --------->TOE2(3)                    <---------ANAC46                    --------->ANAC55(2)                    ----------->GT1                    --------->ANAC46                    <---------ANAC55(2)                   <---------TOE2(3)                  <-----------GT1             <----------DOF2          --------->ARR11(3)          <---------ARR11(1)          --------->ARR14(2)                          --------->ARR11(3)          <---------ARR11(3)                 ---------->DOF2    ------->GAMYB   --------->YAB1      < -->TEIL  <---------ARR14(2)               <---------YAB1    <-----------GT1   <-------TEIL       <-- -TOE2(3)<---------CCA1(2)     ----------->GT1<---------TOE2(3)--------->MYB46(3)              <-----   tgtattcatccatatcttttttacgtaaaataagagtaaatagtcattaaagaaaacatattgtaaccatctagactcaaattcataaactctaaatttg  4684700                                                                                                    <                                                                                               ------                                                                                               ======                                                                                        <---------MYB46(3)                                                                                     <-----------RAV1(1)                                                                               <---------TGA2(1)    <                                            --------->MYB52(1)                 <---------bZIP60(1) --                                     --------->TOE2(3)        --------->MYB52(1)<-----------TGA1   -- -----------GT1                    --------->ICU4--------->CCA1(2)             --------->TGA2(1) <--- -------WOX13(1)          <---------YAB1--------->AHL20(2)--------->ZAT18      --------->bZIP60(1)<-- ----YAB1              <-----------GT1 --------->AHL20(2) <-------TEIL        <-----------STF1 ======   attaacatactactgcttccaaatttttctaattgtcaacattaaaaaacgatacacaagtgcataatggaaacatatatgtcgtcactgttgttgatcg  4684800                  ----------->GT1                  <---------At4g35610                 <---------MYB46(3)              ------>NtERF2             <---------PCF2             <---------DEAR3(1)           <---------RAP2.3(1)           <---------MYB46(3)           ------>NtERF2           <---------ATERF1(1)          <---------DEAR3(1)          <---------ANAC46          --------->ALFIN1       ------>ZmHOX2a(2)       <---------DEAR3(1)     --------->ARR14(2)     <---------ARR14(2)    <------ZmHOX2a(1) =============HOX2a_HOX2a                 --------->HSFB2a(2) <------ZmHOX2a(1)<------MYB83            <---------HSFB2a(2)                   ===================== ------MYB83<------NtERF2     <---------MYB52(1)                         ------->TEIL >ZmHOX2a(2)--------->ATERF1(1)          ------>ZmHOX2a(2)             ============================== =======HOX2a_HOX2a         --------->DEAR3(1)                         ------->GAMYB       ---------- ------MYB46(1) <---------ANAC46       <---------ARR14(2)             --------->MYB46(3)  ------>NtERF2 ------->MYB55(2)--------->ALFIN1      --------->ARR14(2)             <---------MYB52(2)  <---------ZAT18 ------->MYB111(2)<------MYB46(1)<---------MYB52(1)               --------->At4g35610 --------->ALFIN1 ------MYB52(1)<---------ZAT2<-----------HVH21         <-----------------------TaNAC69(2)<---------PCF2 ------P <---------LBD16  <---------At5g28300<---------GLK1(2) --------->At4g35610  <---------ANAC46 ==========HOX2a_HOX2a   <-----------GT1<------ZmHOX2a(2)   ---------->DOF2     <----------DOF2   gtaggaggatcggcgggggctggtgattcaccgtcgtttgggatccagaatgtgagaaccgtagaagcagcaacgaacatggctctacgtggtgcccatt  4684900  Previous    Next  AGI:  At5g14520.1    Description:  pescadillo-related. similar to hypothetical protein [Vitis vinifera] (GB:CAN80148.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14711.1); similar to pescadillo-like protein [Zinnia elegans] (GB:CAL90975.1); contains InterPro domain BRCT; (InterPro:IPR001357); contains InterPro domain Pescadillo, N-terminal; (InterPro:IPR010613) Range:  from: 4680699    to: 4684407    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g14530.1    Description:  transducin family protein / WD-40 repeat family protein. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G66240.2); similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G66240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14716.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 4684623    to: 4686912    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version