Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------ATHB12                               <---------YAB1           <---------YAB1      <---------ICU4                                         --------->YAB1  ----------->RAV1(1) ----      <--------HAHB4             ---------->DOF2            <---------ATHB12--------->ANAC46    <----     <---------ATHB12        ---------->DOF2                --------->ICU4--------->ANAC46 <---------WOX13(1)   --------->WOX13(1)    --------->TOE1(2)      <---------At4g35610  ---------->DOF2  <----------DOF2   agtatccatcattttccaatcgataaacctagaaagaaagacaatatttcagctatttagcaatgatcagtgaaagacacaacacatactttgatagatt  4664300         <---------ARR11(3)         --------->ARR11(3)    ----------->RAV1(1) ----------->GT1    --------->RAP2.6(2)----------->GT1 --------->ANAC46    ---------->DOF2       <-------TEIL       --------->ZAT2 --------->ANAC58  --------->YAB1     --------->AHL20(2)      <---------ZAT2                        < --------->ANAC58 <---------ATHB12   --------->AHL20(2)       <---------At4g35610                   - ----->YAB1     --------->WOX13(1)   --------->YAB1           --------->At4g35610                   < ---TEIL<---------CCA1(2)           <---------ATHB12         ------->TEIL                           <   cataagccacaaatctttcaatcaaaagttaaaaaccaataaaaatacatttctaaacaaatgcagctaagagaaacagttcaatagagaagagagaaac  4664400               <---------ZAT14               --------->ZAT14               <---------ZAT18 --------->AHL20(2) --------->AHL20(1)                                                                          -------- <---------AHL20(2)                                                                          <------- ---------AHL20(2)                                    <------ZmHOX2a(2)                      <------- -------->AHL20(2)                                   --------->ARR11(3)                      <------- ---------ATHB12          <---------GLK1(2)          <---------ARR11(3)           --------->CCA1(2) ---------ATHB51   --------->TOE1(2)  --------->GLK1(2)             <---------TOE2(3)   <-----------RAV1(2)   aaataatttgggaacagagcacatacgagattatcgagagaatcgaactggacaagatcatggaatggatgaggtttgatcaagagatgatcagatggtt  4664500                       <---------YAB1                      >>>>>>>>>>>>>>>>>LFY          --------->ANAC46          --------->ANAC58               <---------SPL7                             --------->GLK1(2)          --------->ANAC58   --------->At5g28300                                   --------->ARR14(2)        <---------ALFIN1    --------->YAB1                                         <---------GLK1(2)        <---------ATERF1(1) ----------->GT1 ----------->HVH21                <---------GLK1(1)       <---------ZAT18<<<<<<<<<<<<<<<<<LFY <---------TOE1(2)              --------->ANAC58 ->HSFC1(2)          <-----------GT1     --------->TOE1(2)                --------->ANAC58 --MYB46(3)   <---------HSFB2a(2)        --------->TOE2(2)          <---------GLK1(1) --HSFC1(2)------>NtERF2   <---------ATHB12--------->SPL7<---------ICU4   --------->ANAC46     ------ --HSFB2a(1)  --------->HSFB2a(2)      <---------------AtSPL3       --------->GLK1(1)       ---------   cgagcttagcccacgcccagaaattaccaatggtaaatgaaatcgtacgaccgaagtaaacatcgctagggtttccaagaaacccgattctagcaaacga  4664600                                                    <------ZmHOX2a(2)                                                   <---------ARR14(2)                                             <---------ARR14(2)                                             --------->ARR11(1)                          --------->HSFB2a(2)--------->ARR14(2)                     <----------DOF2        ================HOX2a_HOX2a                   <---------YAB1           <------ZmHOX2a(1)                  <---------ARR11(3)      <---------TOE2(3)                  --------->ARR11(3) <---------DEAR3(2)           --------->ANAC46         <---------TOE1(2)------>ZmHOX2a(2)           --------->bZIP60(2)      <---------TOE2(2)<-------TEIL           --------->ANAC55(1)     <-----------------AG           --------->ANAC58        <---------LBD16 --------->ARR14(2)------------>CBF             <--         <---------ALFIN1 <---------HSFB2a(2)<---------GLK1(2)      <-----------GT1              <--- --->TOE1(2)    --------->ICU4--------->GLK1(1)   *TSS    <---------AHL20(2)                 -------- >MYB52(1) --------->ANAC58  ---------->DOF2===============HOX2a_HOX2a                  <----------DOF2   gcgatgctcgaacacgccattatctttgccagaaatcgccggtttaggattcggatccatttttttgaatttacaatgtttcttaagactcttttgccaa  4664700                                                                                  <-----------RAV1(2)                                                                                 --------->TGA2(2)                                                                                 <---------MYB52(1)                                                                                <-----------TGA1                                                                                <-----------HVH21                                                                               --------->TGA1a                                                                               <---------TGA2(1)                                                                               --------->TGA2(1)                                                  <-----------RAV1(2)          --------->bZIP60(1)                                                <-----------TGA1               <---------O2                                                <-----------HVH21              --------->O2                                               <---------TGA1a                 <---------ANAC58                                               <---------O2                    <---------TGA1a                                  <---------At4g35610                          <---------ANAC55(2)                                  --------->At4g35610                          <---------ANAC46                                  =======================MYC_MYB               <---------bZIP60(1)                                  <-------GAMYB--------->TGA1a                 <---------ANAC58                              <-----------HVH21--------->bZIP60(2)             --------->bZIP60(2)                             --------->TGA1a   --------->O2                    <---------bZIP60(2)                             =============MYC_MYB--------->TGA2(2)            ----------->STF1                             <---------O2      --------->ANAC58             ----------->TGA1                     ====================================bZIP_DOF           ----------->HVH21                     ==================bZIP_DOF--------->ANAC55(1)         <-----------HVH21   <---------At4g35610       --------->O2      --------->ANAC46         <---------ANAC58          --- -------AHL20(2)     <----------DOF2----------->HVH21                   <---------ANAC58          <-- --------TBP       <---------YAB1<---------MYB46(3)                     <---------ANAC46 --------->At4g35610 ---->CBF   <-----------GT1  <---------TGA1a   --------->ANAC58  <---------MYB52(1)      <---------At4g35610   tttatagctgattttaaacttatctttagacccgtcggatgacatttacacgtcaggtctggtgtctgtttttttcgtgtgacgtcaggtctgatgtctg  4664800                                                                                              -------                                                                                     --------->ATHB12            <---------TOE1(3)                 ---------->DOF2                        <---------ICU4            <---------TOE2(3)            <---------WRKY18(1)                        --------->ICU4   --------->ZAT14                      --------->WRKY12                            <---------YAB1   <---------ZAT14                      --------->WRKY38(1)                       --------->YAB1 ------>ZAT14        ----------->GT1    --------->WRKY45                  ----------------->AGL1 -------ZAT14     <---------AGP1     <---------ANAC46    ----------->RAV1(1)     ----------->GT1   ttcagtaaacagttaaggtagttctgtaatttgagagtctcgttgaccaaaagaaacaacaacaaaatttagttgggcctaaactgataattgggcctgt  4664900                 ----------->TGA1               <---------ICU4              --------->ICU4                                       --------->KAN4(1)     --------->CCA1(2)                                            <---------KAN4(2)    --------->AHL20(1)                  ---------->DOF2          --------->YAB1    --------->ARR11(3)     <---------AHL20(2)                  --------->ANAC58   --------->MYB52(1)   --------->AHL20(2)      --------->AHL20(2)                  --------->ANAC58 <---------MYB59 ---->GT1    <----------DOF2     <-----------------------TaNAC69(2)<---------KAN4(1)            <----   aacaaatatatgggtctttatgacgaaatttaaatactgtgtaaaagctggacatcaactcggacacgaataatccaaatgaactaactaaaccgaaatt  4665000                          --------->YAB1                      --------->AHL20(2)                      <---------AHL20(2)                     <---------AHL20(2)                     --------->AHL20(2)             <---------YAB1                     >>>>>>>>>RAP2.2            <---------ARR14(2)                     --------->AHL20(2)        <---------CCA1(2)            <---------ARR11(1)                 <------MYB46(1)               ------>MYB83            --------->ARR14(2)                 <------MYB83                  ------>MYB46(1)        -            --------->ARR11(3)                 ----------->GT1          <-----------GT1--------->TOE2(3)            <---------ARR11(3)                --------->MYB59 <---------ATHB12<---------ARR14(2)    - ---TEIL   <---------CCA1(2)            <-----------GT1     --------->WOX13(1)--------->ARR14(2)   --   catcgacaacttcatatcttcaatttaatcaaactgagctattcacattaggttaaaatagccaattagtcttttaaccaaatctccaatctaaaccaat  4665100                                          <---------ANAC55(2)                                          --------->ANAC55(2)             <-------TEIL                                <-------TEIL                             --------->CCA1(2)      --------->ARR11(3)        ------->TEIL   --------->ICU4         <---------YAB1              <-- -------->TOE1(3)           <---------------AtSPL8              --------->ARR11(3)             ------ -------->TOE2(3)           --------------->AtSPL8              <---------ARR11(3)        ----------- --------->RAV1(2)   <---------ZAT6 --------->AHL20(1)         <---------CCA1(2)        ---------->DOF2   aacctgaataccttgagagattagagatagtatgtacatatattaagtaagtatttctcacatctatatcttaagattcaaaacatgttagaaagaaaaa  4665200  Previous    Next  AGI:  At5g14470.1    Description:  GHMP kinase-related. similar to GHMP kinase family protein [Arabidopsis thaliana] (TAIR:AT3G01640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14683.1); contains InterPro domain Mevalonate and galactokinase; (InterPro:IPR006206); contains InterPro domain GHMP kinase, C-terminal (InterPro:IPR013750); contains InterPro domain GHMP kinase; (InterPro:IPR006204) Range:  from: 4662806    to: 4664650    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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