Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                   --------->YAB1            <-------            <-------PIF5                                          <---------YAB1             --------            ------->PIF5                                         --------->ARR11(3)         <--------           --------->bZIP60(2)                                   <---------ARR11(3)         ---------           --------->ANAC58                                <----------DOF2              --------->CCA1(2)           --------->ANAC58                  ------------>CBF   --------->YAB1        --------->YAB1           --------->ANAC46         ---------->DOF2       <----------DOF2          ---------->DOF2          *TSS<---------ANAC46<---------ANAC58     --------->CCA1(2)               --------->YAB1   -          ------->TEIL        <---------ANAC46    <---------ARR11(3)              <---------ATHB12  <         <---------ALFIN1     <---------ANAC58    --------->ARR11(3)        --------->At4g35610     < <------ZmHOX2a(2)  <---------TOE2(3)      ----------->HVH21   <---------YAB1 ------------>CBF  -----   gagatcaaactgcacgtcgtttaagttttctggcttgtcaaagttctgacaatatatgggcctttatgatcataaatcagcccaataaagataagatatc  4658000         ------------>CBF       <---------ZAT2               <---------ANAC46       <---------At4g35610          <---------ANAC58       --------->At4g35610          <---------ANAC55(2)       --------->ZAT2               <---------ANAC58   --------->ANAC46      <---------ANAC58 ->GLK1(1)               <---------ANAC58 --GLK1(1)         --------->AHL20(1)                                                              <- ->CCA1(2)         --------->ARR11(3)                                                             <-- -ARR11(3)    --------->YAB1        --------->ANAC55(2)                                           --- >ARR11(3)   <---------ATHB12  <---------MYB46(3)                       <---------At4g35610       --- -------->ZAT14    <---------ARR11(3)                           ----------->HVH21                 <-- ---------ZAT18    <---------AHL20(1)                           ------->GAMYB               --------- ---------ZAT14   --------->YAB1    <---------ANAC55(1)      <-----------GT1              ---------->DOF2 ---->YAB1 --------->WOX13(1)  --------->MYB52(2)            ------->TEIL          --------->AHL20(2)   agaacactcagctcaatcaaaaatatttcttgtttgttccgtctcaagggaaaccatgtaatgtaactgactggagcacatcagaaaaaatagaaagaaa  4658100                                                                                                  ---     ----------->GT1                                                                              <-- --------AHL20(2)                                                                                 <-- -------AHL20(1)                                <---------DAG2                                    --- ------>AHL20(2)                          <-------GAMYB                                           --- ------>AHL20(1)                        --------->MYB59<---------YAB1                            ---- -------AHL20(2)         <---------AHL20(2)<---------MYB52(1)<-----------GT1              <---------TOE2(3) -->GT1     --------->MYB52(1) ----------->GT1  <----------DOF2                      <----------DOF2<   taaaattttgtgaaaaacggaccatgttttattttgtaaaattcggttaacttttttatgaattatctactcgtagaaaaattgatgctttttaggtgaa  4658200                                   --------->DOF5.7(2)                                   <---------MYB52(1)                                  <-----------HVH21      <---------YAB1       <---------ICU4      <---------ATHB12    --------->ICU4 --------->YAB1           <---------YAB1 ------>YAB1              <---------ATHB12 ------HAHB4        <---------ETT(1)                                           <-------GAMYB--------- -------ICU4        --------->At1g77200         <---------LBD16               <---------MYB46(3) ----->ATHB1       --------->DEAR3(2)      <----------DOF2           <---------ZAT2   <-----------RAV1(1) ------>ATHB51<---------------AtSPL8       <---------DAG2            --------->At4g35610   --------->PCF5 ----->ICU4 ---------->DOF2--------->YAB1 <---------DAG2             <---------At4g35610  <---------SPL7 ---------YAB1<---------------AtSPL3 <---------DOF5.7(2)    --------->YAB1<---------YAB1--------->ALFIN1   ttattacaatgaatgaaaggtaccgacaatgataaccgttagcgcctttttctgggttccaataagaacacagctcatgactgttgaactgtggtccggt  4658300                                                                                            ------>ZmHOX2a(2)                    <----------DOF2                                                        --------->CCA1(2)                    ------>ZmHOX2a(1)                                                      <------ZmHOX2a(2)                <---------ARR11(3)                                                        --------->AGP1               --------->GLK1(1)                                                          <---------ARR11(3)               <---------GLK1(1)                                             --------------->AGL15            --------->ANAC46                                                 <---------------AGL15            --------->ANAC58                                                ----------------->AGL2            --------->ANAC58                                                ----------------->AGL3       --------->ANAC58                             ----------->GT1      <-----------GT1  <---------AGP1       --------->ANAC58                        ---------->DOF2         <----------TaMYB80 --------->ARR11(3) >SPL7 --------->ANAC46                   --------->ICU4          ----------->GT1     ---------->DOF2   ccaactctcaagacacgatatccttttttttttttttttctgtaattttcaaagaagaaaatacagttttgttatatacccattttcagaaagatctaaa  4658400                                                                                                 ----                                                                                           <---------TOE2(3)                                                                                   --------->ANAC58                                                                                   --------->ANAC46                        <------------CBF                                           --------->ANAC58                      <---------ARR11(3)                                      <---------MYB52(1) ----                      --------->ARR11(3)                                    <---------ANAC58 <------ZmHOX2a(1)                    --------->ANAC58        *TSS                            <---------ANAC58 -------- ---------->DOF2    --------->ANAC58       ----------->GT1           <----------DOF2    <---------ATHB12   aacaaaagtcttatataagagcaagacattggagagagacagagagtgtgaattgccattaccatcactctctttgtttcgttactcgcaatgaaggata  4658500                                                                         <---------ARR11(3)                                                                     --------->bZIP60(1)                                                                     <---------bZIP60(1)            <   ---------->DOF2                                                ----------->HVH21               --- ----->GLK1(2)                              <---------ANAC58  <---------ZAT14                <------- ----->ARR11(3)                             <---------ANAC58  --------->ZAT14           <---------At4g35610 ->YAB1           <---------TOE1(3)    <---------AtLEC2    <----------DOF2           --------->ZAT14<   atcttgaaagagcaaaacttatggtttcttctactgtgttttcatggcttcttctgtgtctctttgcagtgacaacatctgtttcagttcagcctacgtg  4658600                                                                                          <---------TOE2(3)                                                                                          <---------TOE1(3)                                                                                        <---------WRKY38(1)                                                            <----------DOF2             <---------WRKY12                                                          ------>NtERF2                --------->WRKY18(1)                                                         --------->RAP2.3(2)          <-----------HVH21                                       <---------ALFIN1 --------->RAP2.3(1)        --------->SPL7      ------>NtERF2                  <<<<<<<<<<<<<<<<<LFY--------->DEAR3(1)       --------->MYB52(1)      --------->LBD16               --------->ANAC46   <---------ATERF1(1)       ------>ZmHOX2a(1)     <---------LBD16       --------->GLK1(2)           --------->LBD16         ------>ZmHOX2a(2)    <---------LBD16       <---------GLK1(2)            ------>NtERF2          <------ZmHOX2a(2) ----------DOF2          --------->HSFB2a(1)          --------->DEAR3(1)     <---------ARR14(2) ---->TEIL               --------->GLK1(1)            --------->ANAC46       --------->ARR14(2) --ANAC46    <-----------GT1  <---------YAB1     --------->ARR14(2)          --------->ARR11(3) ---------DAG2      <---------LBD16 <---------ETT(1) <---------LBD16         <---------ARR11(3)   tacttttccggcgatttacaacttcggagattctaattccgacactggaggtatctccgccgcttttgagcctattagggatccttacggtcaaggtttc  4658700            --------->LBD16          <---------LBD16         ------>MYB83         -------->P         ------>MYB46(1)         --------->MYB52(1)        <---------ALFIN1        --------->MYB55(1)                     --------->ATHB12       --------->MYB46(3)                 --------->ATHB12                                      <----       <---------MYB55(2)            <---------YAB1                                           <------       <---------ABI4(2)       <---------RAP2.6(3)     --------->ANAC58               --------->AHL20(2)   --------->DEAR3(1)         --------->RAP2.6(2)      --------->ANAC58               --------->YAB1   ttccacagacccaccggaagagactccgatggccgtctcaccattgatttcattggtaagaaatttgcagagaaaaacagagcttcaataaaaaaacttt  4658800                                                                     ----------->RAV1(2)                                                             --------->At4g35610                                                             --------->ZAT2                                                             <---------ZAT2                                                             <---------At4g35610                                                             ----------->RAV1(2)                                                       <---------ANAC58            <---------ARR14(2)         --------->TOE2(3)                             <---------ANAC58            --------->ARR14(2) -----YAB1                            <---------YAB1   <---------ANAC46       <---------At5g28300 ----DOF2--------->TOE1(3)          <----------DOF2  <---------MYB46(3)    <-------GAMYB <---------At4g35610   gattcaaataacattaaaccaaaaaaaaaaaaaaaaaactttgattcttgaactgtggtttgcagctgagcgtctggggttaccgtatttgagcgcatac  4658900  Previous    Next  AGI:  At5g14440.1    Description:  similar to surfeit locus protein 2 family protein / SURF2 family protein [Arabidopsis thaliana] (TAIR:AT5G40570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14675.1); contains InterPro domain Surfeit locus 2 (InterPro:IPR008833) Range:  from: 4655906    to: 4657910    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g14450.1    Description:  GDSL-motif lipase/hydrolase family protein. similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G26430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14674.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087) Range:  from: 4658444    to: 4660178    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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