Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->At4g35610                         <---------At4g35610                         --------->ZAT2                               <---------At5g28300          --------->ANAC58         ----------->RAV1(1)             --------->DOF5.7(2)          --------->ANAC46        <----------ID1                  --------->TOE2(3)      <------ZmHOX2a(1)  <---------ZAT2                     <---------ANAC55(2)           --------->AHL20(2)     <----------ID1    ========================RAV          --------->ANAC55(2)     --------->TOE2(3) --------DAG2          <-----------RAV1(2)  ---------->DOF2 <---------ANAC58        --------->YAB1 ---------DOF2   ---------->DOF2------------------------>ANAC81  <---------ANAC46   --------->TOE1(3) ->ZAT6   --------->ANAC58  --------->At4g35610             <---------ANAC58     --------->YAB1   actttttaggacaagaaaccaaagtccagctgcagaacaacaaaacaaaagagaagaacatttcgtaacgtttacagtgtctataatcttaattcaatac  4657500                                                                                 ------>ZmHOX2a(2)                                                                                 ====================                                                                                =====================                                                                                <------ZmHOX2a(2)                                                                               <---------ARR14(3)                                                                               --------->ARR14(3)                                                                               --------->ARR11(3)                                                                               <---------ARR14(2)                                                                               <---------ARR11(3)         <------ZmHOX2a(1)                                                     --------->ARR14(2)        --------->ICU4                        <------ZmHOX2a(1)               <------ZmHOX2a(1)        <---------YAB1                <----------ID1                      <---------MYB52(1)   --------->WOX13(1)   <----------DOF2--------->CCA1(2)                 <-------GAMYB   aaaatcagtcaggattgaaatcgcaacttttgacatgagagagacgaaggagtaagtaaacaatagattaccgagcgttaggatcttgttcgaacaagtt  4657600                                                   --------->DOF5.7(2)                                                <------NtERF2                                           --------->ANAC46                  --------->CCA1(2)        --------->ANAC58      <---------ANAC58                     --------->ANAC58                       --------->HSFB2a(2)      <---------ANAC58                    --------->RAP2.6(3)                 <----------DOF2  <------ZmHOX2a(1)                 XXXXXXXXXXXXXXXXXXXX>MIR4228            ---------->ID1 ========HOX2a_HOX2a     --------->ICU4  --------->MYB52(1)        --------->ARR11(3) ========HOX2a_HOX2a--------->DAG2  ----------------->AGL2         <---------ARR11(3)         -------   aagaggaggcttgctatgagataaggcataatcaataagccctaaacggcatcgtttactctgtgaatagaccttcttgtctttctcgagtagctcgtga  4657700                                                                  --------->ATERF1(1)                                                                  <------NtERF2                                                                 <---------RAP2.3(1)                                                                 --------->ABI4(2)                                                                 <---------ATERF1(1)                                                                 ------>NtERF2                                                                --------->DEAR3(1)                                                                <---------DEAR3(1)                                                               --------->RAP2.3(1)                                                               <------NtERF2                                                              <---------DEAR4(2)                                                              <---------ATERF1(1)                                                              <---------ORA47(2)                    -                                                              <---------RAP2.3(1)                   <                                                              <---------DEAR3(2)                    -                                                             <---------DEAR4(1)                     -                                                             <---------RRTF1(3)                     -                                                             <---------DREB2C(2)                    -                                                             <---------DEAR3(1)                     -                                                             <---------RAP2.3(3)                   <-             --------->AHL20(2)                             <---------ORA47(1)                     <-       --------->ANAC46                             --------->LBD16--------->DEAR3(1)              --       --------->ANAC58                           <-----------------AGL1                           <-       --------->ANAC58                           ----------------->AGL1         <-----------TGA1 <--    --------->ZAT14                       <----------DOF2  <-----------HVH21   <------NtERF2    <----    <---------REM1(2)      <---------HSFB2a(2) <---------ANAC58--------->ATERF1(1)           ------>ZmHOX2a(1)    <---------ZAT14        --------->HSFB2a(2) <---------ANAC58--------->DEAR4(2)<-----------HVH21<-- ---->HVH21  <---------AHL20(2)    <---------ANAC46----------------->AG      <---------DEAR3(1)<-----   cccgtctgcacgcatttaaatctcccgttctcgagtttcttatactttggcttccccaataggtcggcgccttccttcgtcgtcgtcacctcttcctctg  4657800         <---------TOE2(3)         <---------TOE1(3)   <------NtERF2  ------>NtERF2 --------->ANAC46 <---------ATERF1(2) --------->DREB2C(2) --------->RRTF1(2) --------->DEAR3(1) --------->RAP2.6(2) --------->RAP2.3(2) --------->RRTF1(3) --------->ATERF1(2) --------->RAP2.3(3) -------->DEAR4(2) ------NtERF2 -------->ORA47(2) -------->RAP2.3(1) -------->ERF1 -------->ATERF1(1) -------->RRTF1(1) --------RRTF1(1) --------ATERF1(1)                                                                        <---------ZAT6 ---->NtERF2--------->GLK1(2)                                                        <----------DOF2 --------RAP2.3(1)                                              <-----------GT1    <---------RAP2.6(3) -------ETT(2)                                     <---------ARR14(2)            ---------->ID1 -------HVH21                      <---------MYB46(3)        ----------->GT1 <---------bZIP60(2) -------DEAR3(1)                  <--------P       --------->ARR14(2)        <---------ANAC58 ------RAV1(1)                   <-------GAMYB  <------ZmHOX2a(1)            <---------ANAC58   tcgccgccattgaggttctatttcttagcaatttgggttgtttcactgaaggaggtctgcaagtagttacacgattgtgacttgccgttttagtgtaatt  4657900                                                                                             --------                                                                   --------->YAB1            --------            <-------PIF5                                          <---------YAB1             <-------            ------->PIF5                                         --------->ARR11(3)         <--------           --------->bZIP60(2)                                   <---------ARR11(3)         ---------           --------->ANAC46                                <----------DOF2              --------->CCA1(2)           --------->ANAC58                  ------------>CBF   --------->YAB1        --------->YAB1           --------->ANAC58         ---------->DOF2       <----------DOF2          --------->YAB1          *TSS<---------ANAC46<---------ANAC58     --------->CCA1(2)               ---------->DOF2  <          ------->TEIL        <---------ANAC58    --------->ARR11(3)              <---------ATHB12  <         <---------ALFIN1     <---------ANAC46    <---------ARR11(3)        --------->At4g35610     - <------ZmHOX2a(2)  <---------TOE2(3)      ----------->HVH21   <---------YAB1 ------------>CBF  -----   gagatcaaactgcacgtcgtttaagttttctggcttgtcaaagttctgacaatatatgggcctttatgatcataaatcagcccaataaagataagatatc  4658000         ------------>CBF       <---------At4g35610          <---------ANAC46       --------->ZAT2               <---------ANAC55(2)       <---------ZAT2               <---------ANAC58       --------->At4g35610          <---------ANAC55(1)   --------->ANAC46      <---------ANAC58 ->GLK1(1)               <---------ANAC58 ->CCA1(2)         <---------ARR11(3)                                                              <- --GLK1(1)         --------->ARR11(3)                                                             --- -ARR11(3)    --------->YAB1        --------->ANAC55(2)                                           <-- >ARR11(3)   <---------ATHB12  --------->MYB52(2)                       <---------At4g35610       --- ---------ZAT14    --------->AHL20(1)                           ----------->HVH21                 <-- ---------ZAT18    <---------AHL20(1)                           ------->GAMYB               --------- -------->ZAT14   --------->YAB1    <---------ANAC58         ------->TEIL                 ---------->DOF2 ---->YAB1 --------->WOX13(1)  <---------MYB46(3)            <-----------GT1       --------->AHL20(2)   agaacactcagctcaatcaaaaatatttcttgtttgttccgtctcaagggaaaccatgtaatgtaactgactggagcacatcagaaaaaatagaaagaaa  4658100                                                                                                  ---     ----------->GT1                                                                              --- --------AHL20(2)                                                                                 <-- ------>AHL20(1)                                <---------DAG2                                    --- -------AHL20(1)                          <-------GAMYB                                           <-- ------>AHL20(2)                        --------->MYB59<---------YAB1                            ---- -------AHL20(2)         <---------AHL20(2)<---------MYB52(1)<-----------GT1              <---------TOE2(3) -->GT1     --------->MYB52(1) ----------->GT1  <----------DOF2                      <----------DOF2<   taaaattttgtgaaaaacggaccatgttttattttgtaaaattcggttaacttttttatgaattatctactcgtagaaaaattgatgctttttaggtgaa  4658200                                   <---------MYB52(1)                                   --------->DOF5.7(2)                                  <-----------HVH21      <---------ATHB12     <---------ICU4      <---------YAB1      <---------ATHB12 --------->YAB1           <---------YAB1 ------>YAB1              --------->ICU4 ----->ATHB1        --------->At1g77200                                        <-------GAMYB--------- ------HAHB4        <---------ETT(1)            <---------LBD16               <---------MYB46(3) ------>ATHB51     --------->DEAR3(2)      <---------DAG2            --------->At4g35610   --------->PCF5 -------ICU4  <---------------AtSPL3       <----------DOF2           <---------ZAT2   <-----------RAV1(1) ----->ICU4 ---------->DOF2--------->YAB1 <---------DAG2             <---------At4g35610  <---------SPL7 ---------YAB1<---------------AtSPL8 <---------DOF5.7(2)    --------->YAB1<---------YAB1--------->ALFIN1   ttattacaatgaatgaaaggtaccgacaatgataaccgttagcgcctttttctgggttccaataagaacacagctcatgactgttgaactgtggtccggt  4658300                                                                                            ------>ZmHOX2a(2)                    <----------DOF2                                                        <------ZmHOX2a(2)                    ------>ZmHOX2a(1)                                                      --------->CCA1(2)                <---------ARR11(3)                                                        --------->AGP1               --------->GLK1(1)                                                          <---------ARR11(3)               <---------GLK1(1)                                             --------------->AGL15            --------->ANAC58                                                 <---------------AGL15            --------->ANAC46                                                ----------------->AGL3            --------->ANAC58                                                ----------------->AGL2       --------->ANAC46                             ----------->GT1      <-----------GT1  <---------AGP1       --------->ANAC58                        ---------->DOF2         <----------TaMYB80 --------->ARR11(3) >SPL7 --------->ANAC58                   --------->ICU4          ----------->GT1     ---------->DOF2   ccaactctcaagacacgatatccttttttttttttttttctgtaattttcaaagaagaaaatacagttttgttatatacccattttcagaaagatctaaa  4658400  Previous    Next  AGI:  At5g14440.1    Description:  similar to surfeit locus protein 2 family protein / SURF2 family protein [Arabidopsis thaliana] (TAIR:AT5G40570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14675.1); contains InterPro domain Surfeit locus 2 (InterPro:IPR008833) Range:  from: 4655906    to: 4657910    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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