Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->ANAC58 ------ATHB1 ------>AHL20(2) -------AHL20(1) -------AHL20(2) ------>YAB1 -------ICU4                <---------At4g35610 ------YAB1                 --------->At4g35610 ----->ICU4   <---------AHL20(1) --->YAB1     --------->AHL20(1)                  ---------->DOF2 ->AHL20(2)  --------->AHL20(2)                 --------->AtMYB61           ------->TEIL >YAB1  --------->ANAC58  --------->REM1(1) <---------ETT(1)            --------------->AtSPL8<------   taattttaaaacgaaatatataaaacttacatctgaaaaattagttccgaccaaaagagttagcacctcttggttttgtacctgcatgctaacatatcag  4591300                                                          <---------ANAC58                                                     <---------AHL20(2)--------->YAB1                         --------->WOX13(1)       <---------AHL20(2)   <---------ICU4                   ---------->DOF2              <---------YAB1        <---------YAB1                <---------WOX13(1)             --------->AHL20(1)   --------->YAB1              --------->ATHB12                 --------->AHL20(2)--------->YAB1             --------->ICU4              ----------->GT1  <---------ANAC46<---------ICU4             <---------AHL20(2)        ---------->DOF2    <---------ANAC58<-----------GT1          -- -----RAV1(2)--------->AHL20(2)   ---------->DOF2--------->AHL20(2)<---------YAB1                  <-   gttgaacaatatgcattaattgaaagtcaatctgaaaaaagaaaagaaatattatataatgggtgtattatcataataactatagaaatagttgtttttt  4591400                                                 --------->AHL20(2)                                      <---------ICU4          --------->REM1(1)          <---------AHL20(2)        <-----------GT1        <----------DOF2  --------->YAB1    <---------TOE2(3)      <-----------GT1      --------->AHL20(2)    <---------TOE1(3) ----------->GT1--------->AHL20(2) ------------->AGL15<---------At4g35610      --------->YAB1 ---------DOF2  <-----------HVH21--------->AHL20(2)   <-------TEIL                               ----   tcttttaatgttacaacatgtgagatgttataccttttattaattactaataaaaatacatatattccccatttatgttctactaatatgcagacaaaat  4591500                                                                                ----------->HVH21                                                                          --------->ANAC58                                                                          --------->ANAC46         <---------MYB59                                                  --------->ANAC58      <-----------GT1          <---------TOE2(3)                       --------->MYB46(3)   <---------AHL20(2)         <-----------GT1                         --------->ANAC58   <---------ICU4      --------->TOE2(3)                              --------->ANAC46  --------->AHL20(2)  --------->YAB1                                  --------->ANAC58  --------->ICU4    ------->TEIL                                   <---------ZAT18                 -- ------->GT1--------->YAB1--------->WOX13(1)  <-----------GT1      --------->ZAT14      ----------->HVH21   ggtatttattaccaaaataatgtatcatcaattaacaatatggattattttctatttaagctatgccattgcacccaagccagtgacactgtgacagtgt  4591600                             ------>MYB46(1)                             ------>MYB83                                         <-------GAMYB                         --------->PCF2                                           --------->At5g28300                         <---------TCP15(1)                                      <---------MYB46(3)                         <---------TCP20  --------->AHL20(2)                   --------->LBD16                        --------->TCP15(1)<---------AHL20(2)    --------->YAB1------->GAMYB             --------->At5g28300     <---------YAB1      <-----------GT1     --------->MYB46(3)            ----------->GT1 <---------ALFIN1          --------->YAB1        <---------At5g28300         --------->MYB52(1)--------->MYB46(3)    ------------>CBF          <-----------GT1----------- --------->At4g35610    <---------PCF2   --------->AHL20(2) <---------------AGL15----------->GT1 ------->YAB1<-------GAMYB--------->TCP15(2)   <-----------GT1 <---------ATHB12<---------LBD16   atcagcataactcacggttaaaaatgggacccacttattctcattaaattcaccaattttaaccattcatggttttttaaccgcggttaaacctgtaaaa  4591700                                                                                                 <---                                                                                             --------                  <---------ALFIN1                                                         --------->REM1(2)           <---------GLK1(2)                                                        <---------TGA1a         <---------AHL20(2)                                                         --------->TGA1a         --------->AHL20(1)                *TSS    <----------DOF2                  =================         <---------AHL20(1)               <---------At4g35610                       <---------ANAC46         --------->AHL20(2)          <---------LBD16                                <---------ANAC58        --------->AHL20(2)          ----------->RAV1(2)                             =================    ------------>CBF            <----------DOF2    ===========================================bZIP_DOF >GT1   <---------ATHB12   <<<<<<<<<TBF1  --------->At4g35610                       <---------ANAC58   tcccgtttcaataaattctcacactcttcttcttctttccctggcgctcacttcttttcaagtctctctcttctctctcgagcctcgcgtctgtgtaaag  4591800                                                            <-------GAMYB                                                          <------NtERF2                                                         <---------RRTF1(1)                                                         <---------DEAR4(2)                                                         ------>NtERF2                                                         <---------ATERF1(1)                                                         <---------ORA47(2)                                                         <---------RAP2.3(1)                                                         <---------ERF1                                   <---------HSFB2a(1)  <---------RAP2.3(2)                                   --------->KAN4(1)    <---------RRTF1(3)                                   <---------KAN4(1)    <---------RAP2.3(3)                        <------NtERF2               --------->SPL7                       ------>NtERF2--------->KAN4(2)   <---------DEAR3(1)                      ----------->HVH21             <---------At5g28300                      --------->DEAR3(1)          <---------SPL7                      <---------DEAR3(1)      --------->MYB46(3)                     <------NtERF2 <---------HSFC1(2)   --------->DEAR3(1)                     --------->ATERF1(1)    <---------DOF5.7(2)                     --------->RAP2.3(1)   <---------WRKY45<---------DEAR3(1)                    <---------DEAR4(2)     <---------WRKY12<---------ANAC46                    <---------RAP2.3(1)    <---------WRKY38(1)                                  -----        <---------ARR14(2)         --------->HSFC1(2)  --------->ATERF1(1)         --------->MYB52(1)        --------->ARR14(2)         --------->HSFB2a(1) <---------ABI4(1)          ----------->TGA1 -------ID1         <---------ATERF1(1)   --------->WRKY18(1)       --------->YAB1----------->HVH21 -->DOF2<---------GLK1(2)<---------ANAC46<-----------HVH21--------->ATERF1(1)----------->RAV1(1)----- ===bZIP_DOF       <---------DEAR3(1)    <--------ZAP1<---------RAP2.3(1)    ------>NtERF2     ------ ===bZIP_DOF   ---------->DOF2    <---------KAN4(2)--------->MYB52(1)       <---------ETT(1)  <------   agacaaaacatattctctaaagcggcgacgtttaagaacattcggtcaacgacttacggcggcgttggaatcaaaactccgacaatgacggttttctccg  4591900                                                                                            <--------                                                                                            <--------                                                     --------->ANAC46                       <--------                                                     --------->ANAC58               <---------At4g35610                                                 <---------HSFC1(1)                 <------NtERF2                                                 --------->HSFC1(1)            --------->ANAC46                        ---------->DOF2          --------->HSFB2a(2)           --------->ANAC58     < ->NtERF2             --------->ANAC58           <---------HSFB2a(2)         --------->MYB52(1)<----- ---->LBD16           --------->ANAC58  --------->MYB52(1)    ----------->HVH21--------->ANAC58------ --->ANAC46           <---------YAB1 --------->YAB1  --------->ANAC58  --------->GLK1(1)    <-------- ---LBD16             <---------ANAC55(2)--------->RAP2.6(3) ------>ZmHOX2a(1)--------->RAP2.6(3)   -   gcagacaagtcgttccgatggattacgaaagccgaggtatcacaacggcttctagaagccatcctcgacggagatttcaaaacggcatcggattgcgtct  4592000                                    <---------ZAT2                                    --------->At4g35610                                 <---------MYB52(1)                                <---------SPL7                                ------>NtERF2                                <-----------HVH21                                <-----------TGA1                               --------->RAP2.3(3)                               --------->RAP2.3(2)                               --------->ATERF1(2)                               --------->RRTF1(3)                               --------->DEAR3(1)                               --------->O2                               <---------ATERF1(2)                               <---------bZIP60(1)                              --------->RRTF1(1)                              --------->ATERF1(1)                              --------->ERF1                              --------->DEAR4(2)                              <------NtERF2                              --------->RAP2.3(1)                              --------->ORA47(2)                             <---------ATERF1(1)                             <---------RAP2.3(1)                             ------>NtERF2                             --------->ABI4(2)                           <------NtERF2                           --------->ATERF1(1)                           --------->RAP2.3(1)                          <---------RAP2.6(1)                          <---------ATERF1(1)                          ------>NtERF2                          <---------ERF1                          <---------RRTF1(1)                          <---------ORA47(2)                          <---------DEAR3(2)                         <---------At1g77200                         <---------DREB2C(2)                         <---------RAP2.3(2)                         <---------RAP2.3(3)   <---------ALFIN1      <---------DEAR3(1) <------ZmHOX2a(2)     <-----------HVH21                                                         <--- -ANAC46  --------->ETT(2)<---------RAP2.3(1)                                                  <----- -ANAC55(2)    <---------MYB52(1)<------NtERF2                                                 ------ -ANAC58  <---------DEAR3(1)--------->DEAR3(1)                                                ------- ---------ARR14(2)    <---------ANAC58                                 --------->REM1(2)     <------NtERF2 ----ARR14(2)  --------->DOF5.7(2)  <---------At4g35610               ----------->HVH21      -------- --->ARR14(2) --------->TOE2(3)--------->bZIP60(2)            ----------------------->TaNAC69(2)<---- -ANAC58  --------->DEAR3(1)<---------DEAR3(1)      <------ZmHOX2a(1)--------->LBD16       <---------LBD16 -------->ARR14(2)    <---------ANAC58            --------->ALFIN1------>ZmHOX2a(1)   --------->ZAT14   ccgatccactcgtcgacgttaatttcgtcggcgccgtcagcttaaaaacaaggaggagcgaagtcgtcctccgtgatgagtctcccagcgaagtccgcgt  4592100                                                             <---------ZAT2                                                             --------->ZAT2                                                             --------->At4g35610                                                             <---------At4g35610                                                            ------->TEIL                   <<<<<<<<<<GT-3b                                                         --------->ANAC58                <---------YAB1                                                      <---------ARR14(2)               <---------AHL20(2)                                                      --------->ARR14(2)               <---------ICU4  <---------------------WRI1                --------->DOF5.7(2)                        --------->AHL20(2) ------ANAC46                          --------->ANAC46  --------->ANAC58              --------->ATHB51 ------HVH21                          ------>ZmHOX2a(1)---------->DOF2                --------->ICU4 --->REM1(2)                   <---------MYB52(1) <---------LBD16                ----------->GT1 ------->OsCBT             ------->GAMYB    <---------MYB52(1)                  <---------ZAT6------- ->LBD16                --------->MYB52(1) --------->At5g28300    <---------ANAC46    <---------YAB1 --NtERF2              ----------->HVH21   <-------GAMYB --------->ANAC46      <---------ANAC46   cgagtacgaagaattcaaaaccgatgtaacggcgttattcctcgccgttaatttcggaaacgcagctctcgtgaaggaattactggtaattatttttctt  4592200  Previous    Next  AGI:  At5g14230.1    Description:  ankyrin repeat family protein. similar to XBAT32 (XB3 ortholog 2 in Arabidopsis thaliana 32), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G57740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46642.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14592.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68422.1); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 4591743    to: 4595967    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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