Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                    <---------ZAT6             <-----     <------ZmHOX2a(1)    <---------YAB1                            ----------->GT1          <------- ------CCA1(2)          --------->YAB1                   <---------At4g35610  --------->HSFB2a(2) --->YAB1              <---------YAB1                    --------->At4g35610  <---------HSFB2a(2)   - ---YAB1         <----------DOF2           <---------ARR14(2)   <---------ZAT14          --------->YAB1 ---GT1         <---------DAG2             --------->ARR14(2)   ---------->DOF2   ---------->DOF2----   tatcacaggactagttccccttttgatgataatagaaacttagcaaatattcaaattgctgatgactaaagtgttattttctacaaaagaatcatataat  4560800                                                                                                -----                                                                                                <----                                                                                     --------->AHL20(2)                                                                                     <---------AHL20(2)                                                                                    <---------YAB1---                                                                                  --------->YAB1<----                                                                                 --------->AHL20(2)                                                                                 <---------AHL20(2)                                                                                 <---------YAB1 <----                                                                              <---------AHL20(1)-----                                                                              --------->AHL20(1)-----                                                                         ------------>CBF       <----                 --------->ARR11(3)                                    >>>>>>>>>>WRKY43         <----         --------->ARR11(3)                                            >>>>>>>>>>WRKY38         -----         <---------ARR11(3)                                           ----------->HVH21        <-----  <---------ZAT6 <---------ARR11(3)                                   --------->WRKY38(1)      <----- -----YAB1--------->GLK1(1)                                         <---------At4g35610       ------- ----TOE2(3)  --------->HSFB2a(2) ------->GAMYB                   <-----------RAV1(2)--------->YAB1 --AHL20(2)   <---------HSFC1(1)  --------->TOE2(3)           <------------CBF<---------ARR11(3)----- -------->MYB52(2)<------ZmHOX2a(2)                  --------->YAB1 --------->At4g35610      <------- ----->TOE2(3)<---------HSFB2a(2)--------->MYB46(3)  <---------AHL20(2)>>>>>>>>>>WRKY26      <-------   gttagtgagaagatttctagatcatttcaatttcaaccacaaattagaaaactatttataagctcattgcaggtgaccaatatataattatatcagcacg  4560900     --------->TOE1(2) -->MYC2 ---PIF4 ------>REM1(2) ---PIF5 ---MYC4 -->MYC4 -->MYC3 ---MYC2                                                                                   --------->AtMYB61 ---MYC3                                                                                --------->ANAC46 -->PIF4                                                                              <-----------GT1 ----ANAC55(2)                                                                      ----------->TBP ----ANAC46                                                                    <-----------GT1 ----->OsbHLH66                             <----------DOF2                   --------->AHL20(2) -->PIF5                              ------>MYB83                            <---------AHL20(2)  --- -----OsbHLH66                        ------>MYB46(1)                     <---------AHL20(2)     ---- --ALFIN1    ----------->HVH21      <---------MYB59   ----------->GT1     --------->AHL20(2)---------   tgtacaaactacgaagtgacaaacacattagagcttaaccaaattactttggtatatagaaatatagaaaatgtttttaattaactatatacaccaccat  4561000                                                                                                    -                                                                                              -------                                                                                          <---------AHL20(2)        <---------TOE2(3)                                                                 --------->AHL20(2)       ---------->DOF2      <------------CBF                                          <---------AHL20(2) ------>DAG2       ------------>CBF                        --------->ANAC55(2)        --------->AHL20(2) ------>DOF2   --------->DAG2  --------->ATHB12            <---------ANAC55(2)       --------->AHL20(2) -->RAV1(1)   ---------->DOF2<---------WOX13(1)          <-----------GT1   --------->STY1(2)  -------   aaagttgattaaagaaaaaagttcaatctggattgatttagaaaatgtttgaatccatattacatgatcaacattctagctatctgatttaattaataaa  4561100                                                                                                    -                                                                                                   <- --------->YAB1                        --------->At4g35610                                    <------ -------->AHL20(2) <-----------GT1     <---------At4g35610                                    <------ -->YAB1   <---------GLK1(2)   --------->TOE2(3)  --------->YAB1                    --------->AHL20(2) -->AHL20(2)     <-----------GT1      --------->MYB52(1)                      xxxxxxxxxxxxxxxxxxxxxxx   aaataaaaattcagaattttttctctcttcatttcttaatcaactgatagaaacataatgagttttgttaagaaactcgagtttaaaaatatagtggtgt  4561200              --------->At5g28300             ----------->GT1                                                          <---------AHL20(2)      <---------TOE2(3)                                                              <---------AHL20(2)    <---------ATHB12                      <-------TEIL                        ----------->GT1      -- -------->MYB46(3)                     <------MYB46(1)        <---------RVE1(1)      --------->AHL20(2) ----------------AGL1                  <------MYB83          --------->ARR11(3)  --------->AHL20(2)<- ---ZAT6 --------->ALFIN1             <---------TOE1(2)      <---------ARR11(3)  xxxxxxxxxxxxxxxxxxxx ---ANAC46  <---------ZAT6   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      ---------->DOF2  xxxxxxxxxxxx >smallRNA(le3)             ----------->HVH21               <------ZmHOX2a(1)----------->GT1  <------   taaccaatgaggtagtggtaaatctctcaagtgaaggtgctaggttcgaaacatgttggaaaggattttttctccaaagaagataaatttaatctggtgt  4561300     <---------MYB52(1)   <---------------AGL15   --------------->AGL15  <-----------------AG  <-----------------AGL3  ----------------->AGL1  <-----------------AGL1                     --------->CCA1(2)  ----------------->AGL2        <----------DOF2  ----------------->AG         <---------ANAC58  <-----------------AGL2       <---------ANAC58  ---------->DOF2 ------->ARR14(2)       xxxxxxxxxxxxxxxx>smallRNA(i)   ---------->DOF2            <---------PCF2 --------ARR14(2)     <---------GLK1(2)     <---------ARR11(3)                 --------->ALFIN1 x>smallRNA(si3)      --------->ARR11(3) --------->HSFB2a(2)                 <---------ANAC58 xxxxxxxxxxx>smallRNA(le3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)            <---------ANAC58   <---- ---ANAC46            <---------ARR11(3) <---------HSFB2a(2)           <---------ANAC46 <----------DOF2   gaatcccgtttttggaaaatataagatttttgggcttgaatttctagatataaaagaaaaagaaaatggtgtttcttatacgtgggccttctttgggccg  4561400                            ----------->GT1                          ==============================HOX2a_HOX2a                          ------>ZmHOX2a(2)                         <------ZmHOX2a(2)                         ===============================HOX2a_HOX2a                        --------->ARR14(2)                        <---------ARR14(2)                        --------->ARR11(3)                       <------ZmHOX2a(1)                                                      -------                   <------ZmHOX2a(1)                                                         --------                   ==============HOX2a_HOX2a                                               --------->MYB52(1)                   =============HOX2a_HOX2a                                              --------->DOF5.7(2)                <-----------RAV1(2)              <------ZmHOX2a(1)                     --------->ANAC58    --------->GLK1(1) --------->HSFC1(2)    --------->ALFIN1                           --------->ANAC58    <---------GLK1(1) --------->HSFB2a(1)  --------->At4g35610                         <---------ANAC46   --------->ARR11(3) <---------HSFC1(2)--------->LBD16                                <---------ANAC55(2)   <---------ARR11(3) <---------HSFB2a(1)  <---------At4g35610     --------->ANAC55(2) --------->ANAC55(2) --NtERF2       <---------LBD16       <---------LBD16      <-------GAMYB    <---------YAB1 <---------DOF5.7(2)   aacaagatatcatatagtccaggaaggatccagttaataaaccggagcggaggaaatgttcagttggatacttgtttcatgtttgtgagacgtaaacgga  4561500                                                                   <------MYB46(1)                                                                   <------MYB83                                                                  <---------DEAR3(1)                                                                 <--------P                             --------->ATERF1(2)             <-------TEIL                             --------->HSFB2a(2)            --------->ARR14(1)                             <---------HSFB2a(2)           --------->ARR11(1)                --------                             <---------ATERF1(2)           --------->ARR14(2)           <---------HSFB2a(2)                             <---------ANAC46            ----------->ARR10              --------->HSFB2a(2)                            <---------LBD16             <--------P--------->MYB46(2)  --------->SPL7                    <---------ZAT14                    <-------GAMYB                <---------SPL1(2)                    <---------ZAT2                     <------NtERF2                <---------SPL7                    --------->ZAT14                    --------->At5g28300         <---------ANAC58                    --------->At4g35610               <---------MYB46(3)           --------->ANAC55(2)                    --------->ZAT2                   <---------ANAC46            <-----------------AGL1                    <---------At4g35610              <---------RAP2.6(2)   --------->MYB59   --------               <---------ZAT14                   --------->SPL7  <---------MYB55(1)<---------ANAC58 -               --------->ZAT14--------->LBD16   --------->ALFIN1<---------MYB52(1)--------------->AtSPL3 ---->GT1      <---------At4g35610         <---------LBD16 <---------ARR14(2)  <----------DOF2   <--- ->ANAC46   <---------At4g35610<------NtERF2<---------ANAC46--------->CCA1(2)  <---------GLK1(1) ----   aaattttgaatttcttctgctctgctcagtgccggaagcgatggctacgggtatggcggtagatacggtaggcgagttaggctttccgtactggaaccca  4561600                   <---------ARR14(2)                   --------->ARR14(2)                                                  --------->At4g35610              ------>ZmHOX2a(1)                                                       --------->GLK1(2)        --------->ARR14(2)                                                           <---------GLK1(2)        --------->ARR11(3)                              <---------At4g35610       --------->HSFB2a(2)        <---------ARR11(3)            --------->HSFB2a(2)                      ------>ZmHOX2a(1)        <---------ARR14(2)            <---------HSFB2a(2)                   --------------->AGL15       --------->HSFB2a(1)          --------->At4g35610 <---------ZAT2      <---------------AGL15 ->ANAC58<---------GLK1(1)   --------->MYB52(2)        --------->ANAC58    <-----------------AGL1 ->ANAC58--------->GLK1(1) <---------MYB52(1)  <---------ANAC58            <-----------------AGL2 -------->TOE1(2)  <---------GLK1(2)<---------At4g35610--------->ANAC58    <-----------------AGL3 ------ARR14(2)  --------->LBD16   ------->TEIL--------->ETT(2)       <---------------AtSPL8 ----->ARR14(2)<---------LBD16<----------DOF2  <---------ANAC58       --------------->AtSPL8        <   atccgacgaagatttcctccggattcgccgttctttgcatctggaaatgtcgagcgcgagctacttgctaaacaggtactccttatggaatctgaatcga  4561700  Previous    Next  AGI:  At5g14140.1    Description:  zinc finger (C2H2 type) family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G50080.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67772.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880) Range:  from: 4561158    to: 4564602    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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