Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <-----------GT1                               <---------ZAT14                           --------->YAB1                                    ------------------------                           --------->ZAT6                                    --------->CCA1(2)                 <-----------GT1        <---------AHL20(2)                --------->ICU4             --------->AHL20(2)<---------ZAT18                  <---------TOE2(3)    ----------->GT1           <----------DOF2 <---------ICU4                       <---------TOE1(3)    <----------ID1   <----------DOF2        <---------ATHB12 <----------DOF2     <-----------GT1<-------TEIL      <---- -------DOF2 <---------AHL20(2)--------->ZAT14      <----------DOF2     ---------->DOF2    --------->MYB52(1) --GT1<-----------GT1   --------->WOX13(1) <---------DAG2    --------->AHL20(2)    ---------->DOF2   ttttacttttactctttaattactctcaatcactacactcatttactttttattctttgacaatttaacgatagtaaagattcaaaaaagaaaaaacaga  4521800                             <---------ARR14(2)                            ------>MYB83                                       <-----------GT1                            ------>MYB46(1)                               <---------DAG2                          <---------MYB59                                 <----------DOF2                    <---------------AtSPL8                         --------->AHL20(2)       ------->TEIL --------------->AtSPL3                        --------->AHL20(2) >ANAC81   --------->MYB52(1)--------->ARR14(2)                   <---------AHL20(2) -----GLK1(2)       --------------->AtSPL8              ----------->GT1<-----------GT1      <--------   ttagcaatgtacttatcggataatggtaccaaatccaatccaaatgtttttttttgtctggttacaaaataaataactttatttcaatacccatatgttg  4521900                                                          <---------HSFB2a(1)                                                    ---------->DOF2         --------->ANAC58                                                  <---------AHL20(2)      <---------ANAC58                                                  --------->YAB1          <---------ANAC58                                                  --------->AHL20(2) <---------REM1(1)                                               --------->YAB1      <---------ANAC58                 =                                              --------->ICU4       <---------ANAC58                 <                                              <---------YAB1--------->GLK1(2)       <---------TOE2(3)                                           <---------AHL20(2)      <---------ANAC46--------->MYB52(1)      ----------->GT1                  --------->AHL20(2) <---------HSFC1(2)--------->AtLEC2     ---- <-----------GT1                       <---------AHL20(2) --------->HSFC1(2)--------->ANAC58    ----- ---RAV1(1)  <-----------GT1<---------AtLEC2--------->YAB1--------->HSFB2a(1)    <---------MYB52(2) =   tttttacttagtaaataactaattcaatttgcataaactatttaaataataataaaaaggagcttctgttcgtgtagcatgcaaataacgatggagcaaa  4522000                           <---------DOF5.7(2)              ----------->GT1             ------>ZmHOX2a(2)            <------ZmHOX2a(2)           --------->ARR14(2)           <---------ARR11(3)                                                                      --    --------->ATHB12       ---------->DOF2                                               <---------RVE1(1)   --------->AHL20(2)    --------->DOF5.7(2)                                             --------->GLK1(1)   <---------AHL20(2)   --------->TOE2(3)                                               <---------ARR14(2) ===================HOX2a_HOX2a                          --------->At4g35610            <---------GLK1(2) ------ZmHOX2a(1)     <-------TEIL                       <---------At4g35610            --------->ARR14(2) ----->DAG2<---------ARR14(2)                            --------->ZAT2----------->GT1  --------->ARR11(3) ----->DOF2--------->ARR11(3)                           --------->GLK1(2)               <---------ARR11(3) ==================HOX2a_HOX2a   ---------->DOF2 <------ZmHOX2a(1) ---------->DOF2 --------->GLK1(2)   aaggattaattgggatctgtgaaattcgttaaagccaaagagagagagagaggagaagaagctgagggcaaaagagtaacttcagaatcagatattctct  4522100            --------->ANAC58            --------->ANAC58        --------->ANAC58        --------->ANAC58        --------->ANAC46        --------->At4g35610               ------>ZmHOX2a(1)     --------->ANAC46       ----------->RAV1(1)            --------->ANAC58   --------->MYB52(1)      --------->MYB46(3)              --------->ANAC58  ------->GAMYB          ----------->RAV1(1)               <---------ALFIN1 <---------MYB55(2)   --------->ANAC46                     --------->ANAC46 <---------MYB52(2)   --------->ANAC58                   <---------ALFIN1                       <---- --------->MYB46(3)   --------->ANAC58             *TSS----------->RAV1(1)                  <-------- --------->RAV1(1)  ---------->DOF2              ---------->DOF2 --------->TOE2(3)          <--------   gcaacaaacgacgcaaacaaacaaaagcaacaacagcttaaacccttcccataaaacccacacacatccttcactcttctctctctctctctcgcttttt  4522200                                                                          --------->DEAR3(1)                                                                       --------->DEAR3(1)                                                                       --------->AtMYB61                                                                      <---------MYB55(2)                                                                      --------->MYB46(3)                                                                    --------->AtMYB61                                                                   <---------MYB55(2)              --                                                                   --------->MYB46(3)         <------MYB46(1)                                                                 <---------ARR14(2)           <------MYB83                                                                 --------->ARR14(2)          <-------   <----------DOF2                                              <------NtERF2                <-------  <---------ANAC58                                            <---------ANAC58            <---------ANAC58  <---------ANAC58                             ------->TEIL   <---------ANAC46            <---------ANAC46 -----AHL20(2)                          <---------ANAC58      <---------ANAC58    --------->TOE2(3)-- -DAG2                                  <---------ANAC58     <---------LBD16      --------->TOE1(3)== --DOF2                          ------>ZmHOX2a(1)       <---------ICU4<---------ALFIN1   <---------ANAC58   atttgcttttactctcatcttctctatctctcttcctctgtagcttaagaacctctcaaaaatggcggaaccaccaccgtcttaccttcatttcgtaggt  4522300                                                       <---------GLK1(2)                        --------->ANAC58              --------->ZAT2                        ------->GAMYB                 <---------At4g35610                        --------->ANAC46              --------->At4g35610                     -------                        --------->ANAC58      <---------ALFIN1                                -------                  --------->ANAC58           <---------ZAT14                                ---------                  --------->ANAC58        --------->At4g35610                            --------->HSFB2a(2)             --------->YAB1<---------ALFIN1  --------->ZAT14               --------->bZIP60(2)<------            <------ZmHOX2a(2)   <----------DOF2       <---------ZAT2     <---------AtLEC2------>ZmHOX2a(1) ---->ZmHOX2a(1)  --------->AtLEC2        ------>ZmHOX2a(1)          <----------DOF2     <---------HSFB2a(2) --TOE2(2)  =====================================HOX2a_HOX2a     <---------CCA1(2)<---------ZAT14 --TOE1(2)  ==================================HOX2a_HOX2a      --------->DEAR3(1) --------->ZAT14   < ------->AtLEC2  --------->WOX13(1)    ------>ZmHOX2a(1)   --------->MYB46(3)   <---------ZAT14 ----- ==================HOX2a_HOX2a<---------DAG2 <---------ZAT18<---------ALFIN1<-----------HVH21 <------   cctgcaaaaactcgatcatcaagcaaacgccactctttctcctcctctgcacatccagcttcccaccgtctctttccatgtcagtactgtcctcgaaagt  4522400                                                     --------->At4g35610                                                     <---------At4g35610                                                     ------>NtERF2                                                    --------->DEAR3(1)                                                    --------->RAP2.3(2)       ------>ZmHOX2a(1)          --------->ANAC58   ---------->DOF2        <---------DEAR3(1)     --------->ATERF1(1)   --------->ANAC46  <-----------HVH21             --------->ATERF1(1)     <------NtERF2 <---------ALFIN1   <---------MYB46(3)             <------NtERF2          ------>NtERF2 -->HSFB2a(1)       <---------DEAR3(2)             --------->DEAR4(2)     <---------SPL7 -->HSFC1(2)--------->ARR11(3)                     --------->RAP2.3(1)    <-----------HVH21 ->DOF2   --------->ANAC58--------->AtMYB61       <---------ATERF1(1)    --------->DEAR3(1)  -------- ---HSFB2a(1)      <---------DEAR3(1)             ------>NtERF2         <------NtERF2        <------- ---------REM1(2) <------NtERF2                  --------->ANAC46<---------ARR14(2)         --------- ---->ARR11(3)  <---------DEAR3(1)              <---------ABI4(2)--------->ARR14(2)  --------->ZAT6-- ---HSFC1(2)<---------ARR11(3)         ---------->DOF2  <---------ZAT2<---------DEAR3(1)  <---------ALFIN1   tctacacatctcaagctctcggcggtcaccaaaacgctcacaaacgcgaacgcgccgctgctcgtcgtaacctcggcgtcctcgctaactctccacccat  4522500                                                                             --------->ARR14(2)                                                                           <---------MYB52(2)                                                                     <---------HSFB2a(2)                                                                     --------->HSFC1(1)                                                                     <---------HSFC1(1)                                                                     --------->HSFB2a(2)        -----                                                                    <---------LBD16            ------                                                               <---------------AGL15           ------                                                              <-----------------AGL3          -------                                                              ------>ZmHOX2a(2)              <-------               <-------MYC3                                   =================================HOX2a_HOX2a               ------->MYC3                                   <-----------------AGL2         --------              <---------ANAC55(2)    <----------DOF2         <------ZmHOX2a(2)          <------ZmHOX2a(1)    ------>NtERF2                   <---------ANAC46         ==================================HOX2a_HOX2a   --------->ANAC46                 <---------ANAC58        --------->ARR11(3)       <-----------RAV1(2) ->MYB46(3)   --------->ANAC55(1)   <---------ANAC58        --------->ARR14(2)     <----------DOF2 --MYB55(2) <---------ALFIN1 -------->P                     <-----------ARR10--------->MYB52(1)------ >ANAC46 --------->MYB46(3)------>ZmHOX2a(1)                <---------ARR14(2) --------->MYB46(3)<--- ---->ZmHOX2a(1)        ---------->ID1                      <---------ARR11(3)------->TEIL --------->MYB46(3)   cctcgacgacaacaacacgtttcttcgtccttacccttgcttttaccaaaacccatttcaaggatctacttctggaaacgaaccgcttcaggaacagccg  4522600       <---------YAB1    ----------->TGA1                 <---------ARR11(1)  <---------ICU4                     --------->ARR14(2)  --------->YAB1                    <---------CCA1(2) --------->ICU4                    --------->LBD16 ->NtERF2                         <---------ANAC55(2)                                            <--- ----->HVH21               <---------MYB52(1)                                 ------->GAMYB  <------- --->DEAR3(1)           ------>ZmHOX2a(2)           <---------DAG2----------->GT1      --------->MYB52(1) -->DEAR3(2)           <------ZmHOX2a(2)         ------->TEIL     --------->LBD16     --------->ARR14(2) --At4g35610          --------->ARR14(2)     --------------->AtSPL8<---------MYB52(1) <---------ARR14(2) ->At4g35610          <---------ARR14(2) --------->LBD16        <---------LBD16<---------LBD16   ---- ->GAMYB            ----------->ARR10<---------ARR14(2)   ----------------->AGL1     <------ZmHOX2a(1) ---NtERF2 <---------MYB46(3)     --------->ANAC55(2)<----------DOF2         --------->MYB46(3)  <---   acgatgatgacgatggatggctacgatccgtttcatccgtatccgtatgtgtacccttttgcattatccggtaacaacaacgacggaggaaacggcgtta  4522700  Previous    Next  AGI:  At5g14010.1    Description:  zinc finger (C2H2 type) family protein. Identical to Zinc finger protein KNUCKLES (KNU) [Arabidopsis Thaliana] (GB:Q9FFX4); similar to transcription factor [Arabidopsis thaliana] (TAIR:AT5G48890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49067.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 4522151    to: 4522937    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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