Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->ANAC58                                                          ---------                  --------->ANAC46                      --------->ANAC46                    ---------     --------->YAB1  ---------->DOF2           <----------DOF2                              ---------     --------->WOX13(1)                        ------>ZmHOX2a(1)              --------->TOE2(3)    --------->MYB46(3)                        --------->TOE2(3)        --------->YAB1     ----------- ----YAB1         --------->ANAC58      <---------AHL20(2)          --------->WOX13(1)    --------->AtMYB61 ->YAB1<---------ATHB12                 --------->AHL20(2)    --------->AHL20(2)         --------->MYB46(3) -ATHB12   <----------DOF2       <----------DOF2        --------->REM1(1)  ----------->RAV1(1)   <---   attgcaacaatcactttgacacacaaagtttctaactttcaataaaatcctttaacttacaccattatatcaatcttcaacataaactcaaaccacacaa  4448200                          --------->ANAC55(2)                          --------->ANAC55(1)                          <---------ANAC55(2)                          --------->ANAC58                          --------->ANAC46                                   --------->ANAC58                 --------->ATHB51                           <---------WOX13(1)       <---------ARR11(3) --------->ANAC58              <----------DOF2      --------->ANAC46 >ANAC58         --------->AHL20(2)                   --------->At4g35610    --------->ANAC58 >ANAC58         -------->ATHB1                   ------->TEIL           --------->CCA1(2) >ANAC46        <---------ATHB12                  <---------ARR14(2)    --------->ARR11(3)          < >RAV1(1)       --------->ICU4                    --------->ARR14(2)    <---------ARR11(3)          < ------GLK1(2)  <---------ATHB51               <---------ATHB12     ---------->DOF2             <----   attcttctatatcatccaattattcaacacgaaactctatatcaattcaatgaatctgcttaattgaatgcaaagatatacgaaatttgaagattagagg  4448300                            <---------RAP2.6(3)                            <-----------HVH21                           <---------MYB46(3)                          <---------ANAC46                          <---------DEAR3(1)                        <---------RAP2.3(1)                       <---------DEAR3(1)                       <---------RAP2.3(2)                                               <---------REM1(1)                      --------->At4g35610                <---------------------WRI1      <-----------RAV1(1)                <---------ZAT2                        <---------ANAC58                   <---------bZIP60(2)                --------->ZAT2                       <---------ZAT2                      <---------O2                <---------At4g35610           ----------->HVH21         --------->ARR14(2)     <-----         <---------AtLEC2<------NtERF2      <---------ANAC46      --------->SPL7         <---------ANAC46  ----------->RAV1(2) <---------At4g35610   <---------ANAC58  <---------MYB46(3)         <---------TGA1a ---------ARR14(2)  <---------WRKY18(1)     <---------ANAC58 <---------ANAC46     <---------ZAT14---- -----------GT1 --------->At4g35610--------->At4g35610<---------ANAC58  --------->MYB52(1)     <----- --ZmHOX2a(1)   <------NtERF2--------->WRKY18(1)     --------->ZAT2     <---------ARR14(2) --------->ALFIN1   agtaacctgttccatggcagcttgagcggcggtcatgagcttagtggcgagaccgagcttgcgatgggtacgaagaacggcgagagaagtgatgtggccg  4448400                                                                               <---------At4g35610                                                                               ----------->RAV1(2)                                                                               --------->ZAT2                                                                      <---------ANAC46                                                                     <------NtERF2                                                                   ----------->HVH21                                                                   <---------DEAR3(1)                                                                   --------->DEAR3(1)            ----                                                                  <------NtERF2--------->At4g35610                                           <---------ATHB12     <---------DEAR3(1)              -----                                          <---------------------WRI1------>NtERF2               <---- ----ANAC58                    --------->ANAC58         --------->ZAT14       --------->GLK1(2) ----- ----->ALFIN1                  --------->ANAC58 ----------->HVH21<---------ATERF1(1)           <----- ----ANAC58       ------>ZmHOX2a(1)      --------->MYB52(1)    ------>ZmHOX2a(1)     ------>NtERF2   tggcactcgttgctctcttcctccatcttagccaagacatagccaacgatgcgaccattgtagtcctcggcgacgtagagaagctgaggccatgagagga  4448500                                                                             <---------At5g28300                                                                            <---------ALFIN1                                                                       <------ZmHOX2a(2)                                                                      <---------ARR14(2)                                                                      --------->ARR11(3)                                                                  <------NtERF2                             XXXXXXXXXXXXXXXXXXXX>MIR825          --------->At4g35610                        <---------MYB46(3)                        --------->ZAT2        --------------->AtSPL3                                    <---------ZAT2<-----------HVH21        <---------------AtSPL3                                    <---------At4g35610        <---------------AtSPL8                                   ------>NtERF2 --------->DEAR3(1)        --------------->AtSPL8<---------LBD16                    ----------->RAV1(1)     <---------ZAT6    <--------P<------ZmHOX2a(1)              <-----------RAV1(2) ----->CCA1(2)         ===========================MYC_MYB       <---------ATERF1(2)   --------->ANAC58 ---->ARR14(2)        <---------MYB52(1)--------->O2  <---------ANAC58<---------ARR11(3) -----ARR14(2)    <---------At4g35610   --------->TGA1a         --------->ATERF1(2)   --------->ANAC58 ---->ARR11(3)<---------------AGL15     <---------O2  <---------ANAC58--------->ARR14(2)----------->RAV1(2) -ZmHOX2a(1)  --------------->AGL15     <---------TGA1a   <---------AtLEC2 --------->MYB46(3)   tatggtagaggtagtacttcatctggtagttctcaggaagacacatgagattgcaggcttgcatcgccagcagatcatccaccgtcgctcgcctgatgca  4448600                                                                                              -------                                                                                              -------                                                                                              -------                       --------->LBD16                                                       --------                       <---------LBD16                                                       <-------                      <---------ANAC46                                                      <--------                     <---------LBD16     <---------TOE1(3)                                <---------YAB1       <---------At4g35610            <--------P                       <---------YAB1   --------->YAB1       --------->At4g35610   ---------->DOF2     *TSS              <----------DOF2      ----------->GT1     <---------RAP2.3(3) --------->LBD16 <---------TOE2(3)  <----------DOF2           <------------CBF   aaccatggctgctcaattgctctcgcgcggataaagaggggttagggttttcggtctaatgcctttgggctttattaatctggggacgaattgtaattat  4448700                        <----------DOF2                <------------CBF                             --------->YAB1 -->AHL20(2)   --------->ATHB12                             <---------YAB1 -->YAB1      <---------YAB1                             <-------TEIL             <---------ARR14(2) ->HAHB4      --------->ICU4                      <---------TOE2(3)            <---------TOE2(3) ->ICU4      <----------DOF2 <---------ANAC58   <---------AHL20(2)  <---------DAG2--------->ARR14(2) --YAB1   <---------ARR11(3) <---------ANAC58   --------->AHL20(2)  <----------DOF2 ---TBP   --------->ARR11(3) <---------ANAC46  --------->AHL20(2)<-----------GT1 <------ZmHOX2a(1)   agagaaatatgaggtctttattgaaacttttgcttatattttaggggcatttaatgaaattcattataaactttttcagtttaggatttgaggtccaatt  4448800                                   --------->TOE2(3)                         --------->GLK1(2)                        <---------ARR14(2)                        --------->ARR14(2)                        <---------GLK1(2)                       --------->HSFC1(2)                                <-----------GT1                       <---------HSFC1(2)                     --------->LBD16                       <---------HSFB2a(1)   --------->HSFB2a(2)  --------->ARR14(2)         <-------                       --------->HSFB2a(1)   <---------HSFB2a(2)  <---------ARR14(2)  <-----------HVH21               <---------ANAC46    --------->TOE1(3)         --------->ANAC46        ----------->GT1    --------->ATHB12<------ZmHOX2a(1)    <----------DOF2    <---------LBD16     --------->ANAC46   gggccttgattgtaatggagtaggaagattccgataaccttcactttctataagcttatttctccgcaaattttcttactatacgagatgtcaaataact  4448900                                             <----------DOF2                                          --------->ARR11(3)                                          <---------ARR11(3)                                          <---------ARR11(1)                                          --------->ARR14(2)                                        <                                          <-----------ARR10                                         <                <---------TOE2(3)         <---------ARR14(2)                                        -            --------->ARR11(3)   --------->ZAT2                               ---------->DOF2       -            <---------GLK1(2)    <---------ZAT2  <---------YAB1             --------->YAB1         <-   <---------ANAC46              <---------At4g35610                      ------------------------>ANAC81   <---------ANAC58 --------->GLK1(1)    --------->GLK1(1)               --------->YAB1    ----------   <---------ANAC58 <---------GLK1(1)    <---------CCA1(2)        <---------HSFB2a(2)   <------ZmHOX2a(1) ----GT1  --------->ICU4         --------->At4g35610   <------ZmHOX2a(1)--------->ICU4 <----------ID1   ctgtgccttgtaaagattatggatttcaaactctcagctaggcatatcttttttataggagagacagtcgagaaataatcaaaagaagaaggacaaagag  4449000    <---------ZAT14    --------->ZAT14 <------MYB46(1)                                                                           <------ZmHOX2a(1) <------MYB83                     <----------DOF2                                    ---------->DOF2 ---------AtMYB61      <-----------ARR10                                       <---------ANAC58 ---------MYB46(3)     --------->ARR14(2)    --------->ARR14(2)                <---------ANAC58 -------->MYB111(1)    <---------ARR14(2)    <---------ARR14(2)             --------->ARR14(2) -------->ALFIN1       ------->TEIL       --------->ANAC58             --------->MYB52(1) ----------- -------P             <---------GLK1(2)   --------->ANAC58   <----------DOF2<---------ARR14(2) >DOF2           --------->MYB52(1)     <---------AtLEC2  <-----------GT1   <---------GLK1(2)   -----   agttggtgcagagattagataactgaatcttctcttctttttgcaagtatccctctaaaattacttttaaaacaatcggatacttgctaaagaggaaaca  4449100  Previous    Next  AGI:  At5g13780.1    Description:  GCN5-related N-acetyltransferase, putative. similar to GCN5-related N-acetyltransferase (GNAT) family protein [Arabidopsis thaliana] (TAIR:AT1G03150.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61153.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) Range:  from: 4447262    to: 4448649    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g13790.1    Description:  AGL15 (AGAMOUS-LIKE 15); DNA binding / transcription factor. Identical to Agamous-like MADS-box protein AGL15 (AGL15) [Arabidopsis Thaliana] (GB:Q38847;GB:Q38839); similar to AGL18 (AGAMOUS-LIKE 18), transcription factor [Arabidopsis thaliana] (TAIR:AT3G57390.1); similar to Agamous-like MADS-box protein AGL15 (GB:Q39295); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) Range:  from: 4449017    to: 4450846    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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