Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    ------>ZmHOX2a(2)                    -------->P    =========================HOX2a_HOX2a                    ------>MYB46(1)                    ------>MYB83<---------ARR11(3)                  <---------MYB46(2)                -------->P      --------->ARR11(3)                ------->TEIL<---------ANAC58            ------->TEIL    <---------ANAC58        ------>ZmHOX2a(1)      --------->ATHB12      --------->TOE2(3)       <---------YAB1                              <---- <------ZmHOX2a(2)<---------MYB59 ================================HOX2a_HOX2a                <------- ---------ARR11(3)<---------MYB111(1)       <-----------GT1------>ZmHOX2a(1)          --------->YAB1   tagatcaaagattgaatctacctactacttccttgatcttctgtttttgccatcctgattcctgaatgtttttaagtgtttgtagcaagaatatttgact  4427400                                                                                   --------->ZAT18                                                                                   <---------ZAT14                                                                                   --------->ZAT14                                                                                   <---------ZAT18---                                                                            <-----------GT1--------->ZAT14 ------DOF2                 ----------->GT1                             <---------AHL20(2) <---------ZAT18 ----GT1        ----------->GT1                     ----------->GT1     --------->AHL20(2) <---------ZAT14   ttctactaactccaaacctggtttaaaattttgtgaaatattcaatggtttcaagagaaaaaaaaacttagaatttttttactagtccactacttcactc  4427500                                                                                     <---------TOE1(2)                             --------->TOE2(3)                                      <---------LBD16           --------->ZAT14<---------GLK1(2)                                    <---------GLK1(1) --------->TOE2(3)      <---------YAB1                                         <---------CCA1(2) <----------DOF2     --------->GLK1(2)                     <---------YAB1 <-------MYC3 --->ZmHOX2a(1)     <---------GLK1(2)           <---------ANAC46          ------->MYC3 <------ZmHOX2a(1)   ctactttaatctctaaactccaaattctgattcttaactcatactgtatggtctgtatatgtttatagtttatacacatgggtatctcaggaacaattgc  4427600              --------->ICU4           <---------YAB1          <-----------GT1       <---------AHL20(2)                                                        --------->YAB1     <---------YAB1                                                          --------->AHL20(2)   <---------AHL20(2)   <---------ARR14(2)      ----------->RAV1(1)          <---------AHL20(2)  <---------YAB1 <---------YAB1    ----------->GT1 --------->YAB1         ----------->GT1         --- <---------AHL20(2)     --------->ARR14(2)--------->ANAC46             --------->YAB1             ---   tatttttatttttatcaatattatcggatttgattacatgtaaaacacaacaacaatagttagtctatgtcaacaatagttaattagaaaatgactaatc  4427700                                                                                    <------ZmHOX2a(1)                --------->DAG2                                                    <---------TOE2(2)--            --------->AHL20(2)                                                  --------->TOE2(2) <--        --------->AHL20(2)                                                      --------->TOE1(2) <--       --------->AHL20(2)                                                     <---------TOE1(3)  <---   <---------ATHB12                                                           <---------TOE2(3)  <---   <---------YAB1                                                            --------->MYB52(1) -----  ------>MYB83 ---------->DOF2                                           --------->ATHB12       -----  ------>MYB46(1)                      <-----------GT1                   <---------ICU4         ----- ----->P<---------AHL20(2)           <---------WOX13(1)                 <---------YAB1  --------->TOE1(2) ---->TEIL  <---------AHL20(2)    <---------YAB1      --------->YAB1    --------->ICU4*TSS  <------ZmHOX2a(1)   tacctatcatttaattaaaaagttatagattacgttgtgattaactagagtagtactaatagttagtctatgtcatgattaacgtaggaaactaggaatt  4427800                                                                                                  ---                                                                                                  ===                                                                                                 ====                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                        --------->ATERF1(1)                                                                                      ----------->HVH21                                                                                      --------->DEAR3(1)                                                                          >>>>>>>>>>CAMTA2    -------                                                                          >>>>>>>>>>CAMTA3   <------NtERF2       <---------------------WRI1                                         ------>NtERF2<---------ATERF1(1)      ----------->GT1                        --------->ANAC46             --------->LBD16   ------>NtERF2  <---------MYB52(1)                       --------->ANAC58               >>>>>>>>>>CAMTA1<---------ABI4(2) --------------->AGL1                      --------->ANAC58               >>>>>>>>>>CAMTA5------>NtERF2 -------At5g28300                        --------->ANAC46               <---------LBD16------>NtERF2 ---------------AG                       <---------ALFIN1              ============================== --------GT1                           --------->AtMYB61               ============================== ------WRKY18(1)               ------>MYB83--------->ANAC46   --------->LBD16        --------->DEAR3(2) ---->WRKY38(1)                ------>MYB46(1)                ------>NtERF2        --------->ANAC58 ---->WRKY12         ----------->GT1   ------->GAMYB <-----------GT1   ------>ZmHOX2a(1)<------NtERF2 ------>HVH21     ---------->DOF2     --------->MYB46(3)    <---------LBD16        --------->ANAC58<-   gaccgtttgggttaaaattccaaaggaaaaaccaacttcaaccacacaccacatatttctctcccgcctaatcctccgcgttcccaagccgacgcgccga  4427900 --->ZmHOX2a(2) ========================HOX2a_HOX2a                                                       --------->At4g35610 ========================HOX2a_HOX2a                                                       <---------At4g35610 ---ZmHOX2a(2)                                                                         <---------ALFIN1 ---->ARR11(3)                                                                       <---------ALFIN1 -----ARR11(3)                                  ----------->GT1                     --------->MYB46(3) -----ARR14(2)                   <---------MYB52(2)                               --------->ANAC46 ---->ARR14(2)             --------->YAB1      --------->DAG2                  ------>ZmHOX2a(2) -->DEAR3(1)         --------->LBD16 XXXXXXXXXXXXXXXXXXXX>MIR830             --------->ARR11(3)    <- ====HOX2a_HOX2a     ------>NtERF2  -------->P---------->DOF2                <---------ARR11(3)    == ===HOX2a_HOX2a    <---------LBD16 --------->MYB52(1)--------->ICU4    ===============HOX2a_HOX2a <-- ---------DOF2    ------>ZmHOX2a(1)<-----------GT1--------->AHL20(2)   ------>ZmHOX2a(1) <---------ZAT18   tctttcttctactacttgtcctccggcaataacaaactaaccatttcgaaaagtaattatctatggctctctcctcgttgatctcagccactccgctctc  4428000                                        --------->ARR14(2)                                        <---------ARR14(2)                                       <---------MYB52(1)                                    <------NtERF2                                   --------->ABI4(1)                                   ------>NtERF2                                  <---------DEAR3(1)                                  --------->RAP2.3(2)                                 --------->RAP2.3(1)                                 --------->ERF1                                 --------->ORA47(2)                                 --------->DEAR3(2)                                 --------->RAP2.6(1)                                 --------->DEAR4(2)                                 --------->RRTF1(1)                                 --------->ATERF1(1)                                 <------NtERF2                               --------->ANAC46                             <---------ALFIN1                             --------->TGA1a                             --------->ANAC58                             --------->ANAC46                             <---------TGA1a                  <---------ANAC46--------->RRTF1(3)                  <---------ANAC58--------->RRTF1(2)                  <---------ANAC58--------->RAP2.3(3)              --------->ARR11(3)------>NtERF2             <---------RVE1(1)<-------MYC3             <---------GLK1(1)<-------MYC2             --------->GLK1(1)------->MYC3             --------->RVE1(1)------->PIF5            --------->ARR11(3)<-------PIF5         ------>NtERF2       ==================================================MYC_MYB       <------NtERF2         ==============================MYC_MYB      ------>NtERF2          --------->ANAC58                                               ---------   <---------ANAC58        <---------ALFIN1                                            --------->ANAC46   <---------ANAC58 <---------ZAT6--------->DEAR3(1)--------->DOF5.7(2)               <---------LBD16 ---------DOF2<---------ARR11(3)<---------ATERF1(1) <---------MYB52(1)        --------->LBD16 <------ ======================================bZIP_DOF    <---------RAP2.6(3)     ------>NtERF2--------->LBD16 -------DAG2<---------ARR11(3)------->MYC2         <-------GAMYB    ---------->CDC5  --------->At4g35610   cctttcggtgccgagatatctcgtgttacccacgcgccgccgtttccacttgccgttagcaactcttgactcatcgcctccagagtcatccgcatcatca  4428100                               --------->ANAC46          ---------->DOF2                               <---------ANAC55(2)    --------->ANAC46                               --------->ANAC58       --------->ANAC58                               --------->ANAC55(1) <---------GLK1(1)                               --------->ANAC58    --------->GLK1(1)                               --------->ANAC55(2)<---------ARR14(2)                        ------->GAMYB          --------->ANAC58                       --------->ANAC46        <---------ANAC55(2)                     --------->MYB52(1)        --------->ANAC55(2)                    <---------WRKY12           --------->ANAC55(1)                    <---------WRKY38(1)        <---------HSFB2a(2)                  --------->LBD16              --------->ANAC58                                   ---                 --------->ANAC46--------->DOF5.7(2)  --------->ANAC58                            <--      ------>MYB83<-----------HVH21  --------------------->WRI1                                   ---      -------->P----------------->AGL1         --------->ANAC46                                  <---     ------>ZmHOX2a(1)--------->At4g35610      --------->HSFB2a(2)                            -------    <---------MYB59--------->DOF5.7(2)        <---------LBD16                            --------->ANAC46 >YAB1------>MYB46(1)<---------DOF5.7(2) <---------ARR11(3)   --------->ANAC46      <----------DOF2 ---YAB1--------->TOE2(3) --------->ARR14(2)  <---------------------WRI1<---------MYB52(1)  <--------   tcgattcctacctcgattcccgtcaacggaaacacgttacctagttcttacggaactcgcaaagacgacagcccgtttgctcagttctttcgctccaccg  4428200                                                                                                   <-                                                                                                   <-                                                                                                   <- ------>ARR14(2)                                      <---------ARR11(3)                  <---------ARR14(2) -------ARR14(2)           --------->ANAC58           <---------AHL20(1)                  --------->ARR11(3) ------>GLK1(2)         <---------ATHB12              --------->AHL20(1)                 <---------GLK1(1) ------ARR14(1)       --------->WOX13(1) <----------DOF2                                 <---------CCA1(2) -->ANAC46   ----------->GT1         ---------->ID1   --------->ARR11(3)                 --------->GLK1(1) -ALFIN1    ----------->GT1--------->ANAC58   <<<<<<<<<TBF1           <----------DOF2 <---------YAB1   aatccaacgttgagagggtaatatcaatcaagcctgtttgtctctttcttcttctatatattgattttgagactttagaatatttgttctgatatctggt  4428300  Previous    Next  AGI:  At5g13720.1    Description:  structural constituent of ribosome. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40773.1); contains InterPro domain Uncharacterised conserved protein UCP022348 (InterPro:IPR016804); contains InterPro domain Protein of unknown function UPF0114 (InterPro:IPR005134) Range:  from: 4427786    to: 4429136    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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