Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->TOE2(3)                                                                          <---------CCA1(2) ---------DOF5.7(2)                                                     --------->YAB1 ------->ARR14(2)                                                    --------->WOX13(1) --------ARR14(2)                                                    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ------>DOF5.7(2)                                  <---------At4g35610 <<<<<<<<<ARR2    ============= ->DAG2                      <-------TEIL          <---------GLK1(1)--------->MYB46(3)  <------ZmHOX2a(1) ->DOF2         <---------ZAT18       ----------------->AGL3--------->ANAC46 --------->YAB1    <-----   gtaaacgtatggaaatagtaggctcaaaatatacgttgattccaaaaatatggagatgctacacaaaacaacaatcaaatcttaatcttaggagttgatt  4426700                 <------ZmHOX2a(2)           ------>MYB83  <---------AtLEC2           ------>MYB46(1)          --------->MYB52(1)         --------->TOE2(2)      ----------->GT1                              ---------->DOF2        --------->MYB46(3)      --------->ANAC58                           <------ZmHOX2a(2) >>>>>>>>>GATA-1<---------ARR11(3)    --------->DAG2                 --------->TOE1(2) =======================HOX2a_HOX2a  ---------->DOF2                <---------HSFC1(2) ----YAB1--------->TOE1(2)      --------->ANAC58                ----------->GT1                   <--   atagataaaaaccaacgagatcaatatgcatgagacgaaaaaagcgaattgtaagtgaatcggagatggaaactacgatcaaagaagaagggagaagaaa  4426800                                                                                            ------>ZmHOX2a(2)                                                                                            =========                                                                                           --------->CCA1(2)             <------NtERF2                                   <------ZmHOX2a(2)             <------ZmHOX2a(2)            <---------DEAR3(2)                              --------->AGP1                 --------->At4g35610            <---------MYB46(3)                              --------->ARR11(3)            <---------ARR14(2)           <---------DEAR3(1)                               <---------ARR11(3)            <---------ARR11(3)           <---------ANAC46                                 --------->ARR14(2)            --------->ARR14(3)          <---------------------WRI1               ----------->HVH21                      --------->ARR11(3)          <------NtERF2                           <-------TEIL<-------TEIL                <---------ARR14(3)          <---------ABI4(1)                      --------->CCA1(2)                        --------->AGP1         <---------RRTF1(1)                      --------->ARR14(1)                       --------->ARR14(2)         <---------ERF1                         --------->ARR11(1)                       <---------GLK1(1)         <---------RAP2.3(1)                    <---------ARR14(2)                      ----------->ARR10         ------>NtERF2                          --------->ARR14(2)                 ------->GAMYB        <---------DEAR3(1)               --------->ANAC46   <---------ARR14(2)     <---------SPL7        <---------RAP2.3(2)         ------>ZmHOX2a(2)      --------->GLK1(1)      <---------MYB52(2)        <---------RAP2.3(3)       --------->ARR11(3)   ------>NtERF2              --------->MYB46(3) <---------DAG2               <-----------GT1   <---------GLK1(2)               --------->MYB52(1) <----------DOF2           <----------DOF2    ----------->ARR10                --------->MYB46(3)  -- ---------GT1--------->At5g28300  <---------ARR11(3)  --------->ANAC46       ----------->RAV1(1)  ---   ttacttttcgacggcggtgagaacatcggatttatcgatcttcccaccaagattcgacgcgagatccatagcacttatgcaacaacggacgagatctgca  4426900                        <------ZmHOX2a(2)                       --------->ARR11(3)     <---------GLK1(2)                      <------ZmHOX2a(1)       <---------ARR14(2)                    <---------TOE2(3)         --------->ARR14(2)                               ------ ============================HOX2a_HOX2a<---------GLK1(1)                                --------->ICU4 ------->DAG2      --------->YAB1  ----------->GT1                                     ---------->DOF2 ------->DOF2--------->YAB1      ---------->DOF2                  <------ZmHOX2a(1) <------ZmHOX2a(1)   aaaagtgagactgaatcagaataaggatcaaggagaaaagagaaatcggaatcggaacacacattggaggagacttacgagagagaggataaagatgaat  4427000                                                                             --------->WOX13(1)                                                                           <------NtERF2                                                                           <---------MYB52(1)                 ---------->DOF2    <----------DOF2                        ------------>CBF              --------->At4g35610  <---------ANAC58                       <-----------HVH21      <---------MYB46(3)           <---------ANAC58                      --------->RAP2.6(2)     <---------ANAC46       ----------->HVH21                         --------->ANAC58     --------->ALFIN1     --------->At4g35610                   <-----------HVH21   --------->ZAT2   <---------MYB46(3)     ----------->RAV1(2)                  ----------->GT1      <---------ZAT2  --------->ALFIN1        <---------ZAT2                     *TSS     --------->ANAC46  <---------AtMYB61       --------->ZAT2                 --------->CCA1(2)<---------RAP2.6(3) ------- ->TEIL<------NtERF2      <---------At4g35610         <---------YAB1  --------->ANAC58   ------------   cggagtggtggggaagagctaaagaggcacctgactggctttagtttataactagtaagatagagaggtcacaagccgtcaatcccagcttggcaatgag  4427100                                              <---------ICU4                                             --------->AHL20(2)                                             --------->ICU4                                             <---------ATHB51                                             <---------AHL20(2)                                        <---------YAB1                                      -------->HAHB4                 ------>ZmHOX2a(1)    <---------ICU4                                                -             <---------ARR14(2)       --------->YAB1                                  --------->KAN4(2)             --------->ARR14(2)      --------->ICU4                                   --------->ARR14(2)             <-----------GT1         <---------ATHB51                                 <---------GLK1(2)            <---------CCA1(2)     <---------AHL20(2)               --------->ZAT14    <---------ARR14(2)    <-----------GT1               --------->AHL20(2)           --------->ZAT6        <----------TaMYB80 -->YAB1  --------->AHL20(2)      --------->AHL20(1)         <-----------GT1       --------->YAB1   < >CBF <---------YAB1             --------->AHL20(2)       ----------->TBP   <---------ZAT6          -   agtgtattaccattatatcctctctacttgtccaaattaattatgaaataattagagcctatataactctactctctagtgttaagcatattctccacta  4427200                                                    -------->P    --------->ANAC58                                                    ------>MYB83  ----------->HVH21                                                    ------>MYB46(1)                                                   --------->MYB55(1)                                                  <---------MYB55(2)                                                  <---------MYB46(2)         <---------YAB1                           <---------MYB111(2)       <---------AHL20(2)                         --------->MYB46(3)      <---------AHL20(1)                --------->GLK1(2)         --------->ANAC58      --------->AHL20(2)                <-----------ARR10   <-----------RAV1(2)     <---------WOX13(1)      <---------AHL20(2)         <---------YAB1   <---------MYB111(1)         <---------MYB46(3)      --------->AHL20(1)     <----------DOF2      --------->AtMYB61----------->RAV1(1) ---------->GT1   --------->AHL20(2)   <---------GLK1(2)    ===================RAV--------->MYB52(2) ---------ANAC55(2)         --------->TOE2(3)  <---------ALFIN1   <------NtERF2   --------->ATHB12 -------->ANAC55(2)         --------->TOE1(3) --------->MYB46(3) ------>NtERF2----------->GT1       <   tctcgtaatttattctagtataaaataaaacctttactatagaatctcaccacctaccaagaacaggcgcgacattcgagtggttaattggttttaaatc  4427300                                  =========================HOX2a_HOX2a                    ------>MYB83  ------>ZmHOX2a(2)                    ------>MYB46(1)                    -------->P  --------->ARR11(3)                  <---------MYB59 ================================HOX2a_HOX2a                -------->P      <---------ARR11(3)                ------->TEIL<---------ANAC58            ------->TEIL    <---------ANAC58      --------->ATHB12      --------->TOE2(3)       <---------YAB1                              <---- <------ZmHOX2a(2)<---------MYB46(2)                ------>ZmHOX2a(1)                        <------- ---------ARR11(3)<---------MYB111(1)       <-----------GT1------>ZmHOX2a(1)          --------->YAB1   tagatcaaagattgaatctacctactacttccttgatcttctgtttttgccatcctgattcctgaatgtttttaagtgtttgtagcaagaatatttgact  4427400                                                                                   <---------ZAT14                                                                                   --------->ZAT14                                                                                   <---------ZAT18                                                                                   --------->ZAT18---                                                                            <-----------GT1<---------ZAT18 ------DOF2                 ----------->GT1                             --------->AHL20(2) --------->ZAT14 ----GT1        ----------->GT1                     ----------->GT1     <---------AHL20(2) <---------ZAT14   ttctactaactccaaacctggtttaaaattttgtgaaatattcaatggtttcaagagaaaaaaaaacttagaatttttttactagtccactacttcactc  4427500                                                                                     <---------TOE1(2)                             --------->TOE2(3)                                      <---------LBD16           --------->ZAT14<---------GLK1(2)                                    <---------GLK1(1) <----------DOF2        <---------YAB1                                         <---------CCA1(2) --------->TOE2(3)   --------->GLK1(2)                     <---------YAB1 ------->MYC3 --->ZmHOX2a(1)     <---------GLK1(2)           <---------ANAC46          <-------MYC3 <------ZmHOX2a(1)   ctactttaatctctaaactccaaattctgattcttaactcatactgtatggtctgtatatgtttatagtttatacacatgggtatctcaggaacaattgc  4427600  Previous    Next  AGI:  At5g13710.1    Description:  SMT1 (STEROL METHYLTRANSFERASE 1). Identical to Cycloartenol-C-24-methyltransferase (SMT1) [Arabidopsis Thaliana] (GB:Q9LM02;GB:Q8LKW1); similar to SMT3 (S-adenosyl-methionine-sterol-C-methyltransferase 3), S-adenosylmethionine-dependent methyltransferase [Arabidopsis thaliana] (TAIR:AT1G76090.1); similar to S-adenosyl-L-methionine:delta24-sterol-C-methyltransferase (GB:AAB04057.1); contains InterPro domain Sterol methyltransferase C-terminal (InterPro:IPR013705); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216) Range:  from: 4423698    to: 4427061    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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