Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------ICU4                                                      <---------AHL20(2)                                              <---------ANAC58                                              <---------ANAC58       ----------->GT1                                            --------->ANAC58  --------->AHL20(2)     -------->ATHB1         <-------TEIL                   <---------ALFIN1  <--------HAHB4             --------->YAB1   <--------P                           --------->AtMYB61 --------->ATHB12    ------->GAMYB ---------ZAT6      <---------------AtSPL8  --------->ANAC58  <---------AHL20(2)    <---------YAB1 ---RAV1(1)     --------->LBD16        --------->MYB46(3)<---------ATHB12 --------->REM1(1)   cagtggtaagtttcatccctgagtagtacaggttttgttcgaccacaggcctgtgtttaatcatttaaatcaagttacaacagactatcattgtgcatca  4408600                                                                     <----------DOF2                                                                 <---------WRKY38(1)                                                      <---------ARR14(3)                                   <------ZmHOX2a(1)  --------->GLK1(2)      <---------AHL20(2)         <---------TOE2(3)    --------->ARR11(3)      --------->AHL20(2)         <---------TOE1(3)    <---------ARR11(3)  --------->ATHB12              --------->MYB52(1)    --------->ARR14(3)                          --- --------->ICU4            --------->AHL20(2)   <-----------GT1  <---------WRKY12    ------>ZmHOX2a(1)   gaaatgatttaaacaaactcttactcaaataaactaaggatggctatttgtaacaaaatcttgaaggtcaactttggtcttgtgttcctgcatttggagc  4408700                     ---------->DOF2                  --------->TOE1(3)                  --------->TOE2(3)                        --------->LBD16               <-----------GT1                           <---------LBD16           <---------YAB1                             --------->WRKY38(1)         --------->AHL20(2)                        <---------ANAC58         --------->ATHB51                          <---------ANAC46                             -----        <---------MYB52(1)                         <---------AtLEC2                           -------        --------->ICU4                      --------->ANAC46    >>>>>>>>>TBF1  --------->HSFB2a(2) <-        <---------YAB1      ------->TEIL<-----------GT1 ------->TEIL           <---------HSFB2a(2) <- ------->DOF2<---------AHL20(2)      <---------ZAT6<---------ANAC58 ---------->DOF2 <------ZmHOX2a(1)   aaaaggaaccattattttaacctcaaagtgtatgtttttgtgttacaggccttgcatggaccggaagaagaaaagaaacctctcgaggatgagagcgaaa  4408800                                             --------->ALFIN1                                             ----------->HVH21                                            <-----------HVH21                                           <---------O2                                           <---------TGA1a                    ------->GAMYB          ==================================bZIP_DOF                    =================================MYC_MYB                   <------------AtMYB77    --------->TGA1a                   ==================================MYC_MYB                   --------->MYB46(3)      --------->O2                  <---------At4g35610      <---------ANAC58              --------->ANAC58             --------->ANAC55(2)                                      -         --------->At4g35610               <---------ANAC58                                       --- ---->DAG2    --------->ANAC58  --------->ANAC58      --------->KAN4(2)                          ---- --->DOF2<---------At4g35610    --------->ANAC58<---------RAP2.3(3)                              <--- --------ANAC58   --------->At4g35610      <---------ANAC55(2)                               -------- --------ANAC58  --------->MYB52(1)  <---------MYB52(2)           ---------->DOF2 <---------YAB1 <---   ggcgtaatgagagcggaagcaactgccattcggtaagcaactaagacgtgagggctcattcccttgttcaaagctaattttgctactatagacatcaaag  4408900 -------->SPL7 ------>ZAT18 ------->GT1 ------ANAC58                                                                                   <---- -->DOF2                                                                        <---------MYB46(3) ------ANAC58              <---------YAB1                           <-----------GT1    ---------->DOF2   cgtacaaacattgtatgaaaacaatggctatgaatggccttgctctctcaaacttcattctgcatatataaaacctttctcttggttagaaaagagtagt  4409000                                               <---------ANAC58     ----------->GT1                           <---------ANAC58     <---------MYB46(3)                    --------->CCA1(2)     --------->MYB52(2)           ----------->GT1 <------MYB83          ----------->GT1   --------->AHL20(2) <------MYB46(1)---------->DOF2 ---------->DOF2<---------ANAC46        <-------TEIL -----ZAT6    *TSS   ---------->DOF2 --------->AHL20(2)     <---------AHL20(2)   gtttggtttgttatatggaaaagaaaagaaaaaacaaagttaaatatatgcgtgtgtattatttatacatagattcagttttgaagcctcataacgtttt  4409100                                                                             --------->ZAT18                                                                        ---------->DOF2                                                                  ---------->DOF2 <---------ZAT14                                                                 <------ZmHOX2a(1)--------->ZAT14                                   --------->ANAC58        ---------->DOF2   <---------ZAT14              ---------->DOF2      --------->ANAC46   --------------->AGL15  --------->ZAT14       --         ----------->GT1           --------->ANAC58   <---------------AGL15  <---------ZAT18<--------   catgtgttcagaagtaaaaagcattgtgttgaagtgcaaggaatttaagacatttgcctaaaaaagaggaaagaaaaagagcactaaactcgtgttttaa  4409200                         --------->At4g35610                         <---------At4g35610                        --------->ALFIN1                      <---------ANAC58                      <---------ANAC46                      <------MYB46(1)                      <------MYB83                      <---------ANAC58                     <---------MYB46(3)                     <------MYB46(1)                     --------->MYB55(2)                     --------->MYB52(2)                     <------MYB83                  <---------ANAC58                  <---------ANAC58                                                    <---------AHL20(2)                 <------MYB83                                                         --------->AHL20(2)                 <---------MYB46(3)                    <---------AHL20(2)         --------->ICU4                 --------->MYB55(2)                   <---------AHL20(1)          <---------YAB1                 --------->ATHB12                     --------->AHL20(2)        <---------ICU4                 <------MYB46(1)                      <---------AHL20(2)        --------->YAB1             --------->ATHB12                      <---------AHL20(2)          <---------YAB1            <---------YAB1                        --------->AHL20(2)      <---------DAG2          <---------ANAC58                    <---------AHL20(2)          <----------DOF2     <---------ICU4<--------P<---------GLK1(2)--------->AHL20(2)        ------>MYB46(1) --------->GT1 <---------WOX13(1)<---------YAB1   <---------AHL20(2)    ------>MYB83 <---------YAB1 --DOF2   <---------ANAC58 <---------YAB1   <----------DOF2            <---------ALFIN1<---------AHL20(2)   ggggtaaacatttcttgattggttgggtgctgattctcatagacctcttttattaatttttttgtcaacatacccacttttattattattaatttggcag  4409300                                                               <-----------HVH21                                                              --------->ANAC46                                                         <---------AHL20(2)                   <---------ANAC58                 <---------AHL20(2)                   <---------ANAC58                 <---------AHL20(1)        --------->ZAT14                <----------DOF2   --------->AHL20(2)                  <------ZmHOX2a(2)       <----------DOF2            ----------->HVH21 --------->AHL20(2)    ----------->GT1   ---------       <---------DAG2         --------->AHL20(2)<---------AHL20(2) --------->ANAC55(2)      --------- --------------->AtSPL8 <---------At4g35610    <---------AHL20(2)  <---------ANAC55(2)      <--------   tttcaagtactttactcactagcttccgctcattatatgacctttgttttttattttattttattcgtcacatattttgttaatcgtctaaaccgatcta  4409400                                                                                      ------>MYB83                                                                                      ------>MYB46(1)                                                                                      --------->MYB52(1)              <---------DAG2                                                        <---------MYB59              <----------DOF2                                                       <---------MYB111(1)    <-----------HVH21--------->At4g35610        <---------AHL20(2)                  <---------MYB46(2) >ARR14(2)<---------ZAT14                      --------->YAB1              --------->CCA1(2) >AGP1  --------->O2 <---------At4g35610       --------->AHL20(2)         --------->ARR11(3) -ARR14(2)--------->ZAT14              <-----------GT1  <---------ICU4   <------ZmHOX2a(1)   catatgagtcacttcactttatcaactgcttctaatggatttttctctattatataaaacattactatctcgataggatatagggacctaacatatacaa  4409500  Previous    Next  AGI:  At5g13670.1    Description:  nodulin MtN21 family protein. similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT2G39510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18107.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 4407080    to: 4409014    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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