Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  ------>ZmHOX2a(1)                                               --------->TOE1(3)                                               --------->TOE2(3)                                            <---------ARR14(2)                                           <---------CCA1(2)                                          --------->ARR14(2)                                          <---------ARR14(2)                                         <---------CCA1(2)                  <---------DAG2     --------->ANAC58                  <----------DOF2    --------->ANAC46                 <---------DAG2      --------->ANAC58     ----------->GT1         ------>ZmHOX2a(1)    --------->ZAT2--------->ARR11(3)     --------->ARR14(2)       <---------ZAT2--------->ARR14(2)    --------->ARR14(2)     <---------ARR14(2)       <---------At4g35610     --------->ZAT2   ----------->GT1    <---------CCA1(2)         --------->At4g35610  ---------->DOF2<---------ARR14(2)           ------   tgcttcatatcctctatcaccttttccttctcagcttgcacgcatatatcctcaaaagctgggtaacatatactggttaaatgcttcttcatgtcaagaa  4386000                                                                                              -------                                                                                             <-------                                                                                             --------                                                <---------ATHB12                  ---------->DOF2----                                               <-----------HVH21                 --------------->AGL15              <-----------RAV1(1)  --------------->AtSPL8                        <---------------AGL15           --------->ARR14(2)      --------->MYB59    --------->LBD16           ----------------->AGL1       <---------At5g28300         --------------->AtSPL3                       ----------------->AG       <---------LBD16             <---------------AtSPL8                       ----------------->AGL2   <----------DOF2<---------MYB46(3)        --------->ZAT14   ---------->DOF2   <-----------------AGL1 --->YAB1  <---------ARR14(2)      <---------TOE2(3)<---------LBD16  <---------YAB1        ----------   gaatgctttcacggttctggtggatgactgcgagagtaaggtactctccagtcatccgcgtgatcaaaggtatgatttttttcccaaagttggcaacaaa  4386100                                                                                                  <--                    --------->ANAC58              --------->MYB46(3)                              <--                    --------->ANAC58            --------->ANAC58                                 ----                <------ZmHOX2a(1)               --------->ANAC58                                 <---              --------->SPL7                 <-----------TGA1                       ---------->DOF2 < >GAMYB       <---------TOE1(2)              <-----------HVH21              ---------->DOF2<---------TOE2(3) --MYB52(2) --------->TOE1(2)    --------->ANAC55(1)                     ----------->GT1  <---------DOF5.7(2) ->MYB46(3)<---------ANAC46      --------->ANAC46<---------At4g35610     <---------ANAC55(2)<-------- ----->YAB1<---------ANAC58      <---------ANAC55(2)                    --------->MYB59  --------->WRKY12 ->RAV1(1) <---------ANAC58      --------->ANAC55(2)                <---------GLK1(1)<---------TOE2(3)   catagagaaattttcgtaggacaaacaactcagacacataacaacttcgtcagccactgtgttgatgaagaaatcaggtaaagaattaaagttgacgatt  4386200                                                                                                 ----   <---------ANAC58                                                                              ====   <---------ANAC46                            <---------LBD16                                -------   <---------ANAC58                           <---------ANAC46                              <-------- ----MYB83                            <---------At4g35610                               --------->MYB52(1) ----MYB46(1)              --------->CCA1(2)  <---------bZIP60(2)                 --------->ANAC58 ----->MYB59         <---------HSFB2a(2)      ----------->RAV1(2)                 --------->ANAC58 ------TOE2(3)       --------->HSFB2a(2)   ----------->HVH21<---------YAB1        --------->ANAC46--- --------P      <----------DOF2    ---------->DOF2          <---------WOX13(1)   --------->SPL7<----- -YAB1          <---------DAG2  <------ZmHOX2a(1)         --------->ATHB12     <---------SPL7<-------   aggttgcttacaagaccacttttctcgagatagaggagaaagctcatgacctggagagactgattaatgtctcgccttagtcgcacgacaaaacggcgga  4386300                                                      <-----------RAV1(2)                                                     <---------At4g35610                                                  --------->At4g35610                                             --------->ANAC58                                             --------->ANAC58                                           --------->MYB52(1)                      --------->ANAC58    <xxxxxxxxxxxxxxxxsmallRNA(i)                      --------->ANAC58    ----------->HVH21                    ==============================bZIP_DOF                    ---------->DOF2      <-----------HVH21  --------->ZAT18--------->HSFB2a(2)     <-----------TGA1 ------>DOF2     <---------HSFB2a(2)    --------->O2 <---------ZAT14 ======================bZIP_DOF         <---------TGA1a            --------->ANAC58 -->LBD16    --------->TGA1a            --------->TGA1a --------->At4g35610 -LBD16<-----------HVH21                <---------O2 --------->ZAT14    <---------MYB52(1)  <-------- ------>DAG2 <---------TGA1a            --------->ANAC46<---------At4g35610 <---------MYB52(1) -NtERF2     ==================bZIP_DOF --------->bZIP60(1)        --------->ANAC58         <-------- --ANAC46  <---------ALFIN1             <---------bZIP60(1)     <---------REM1(1)         ------->GAMYB   aaagggctctgtcacacttgtggaaagcattgaactcgtctcgcgtcacggctactgcagatgaagatgaagccattagttagtctttgcaacgcaggta  4386400        ----------->GT1      ---------->DOF2    --------->GLK1(2)<---------ANAC55(2)    --------->ARR11(3)    <---------YAB1           --------->ATHB12                    <---------ARR14(2) <---------GLK1(2)   --------->ANAC55(2)           ----------->GT1                <---------ANAC55(2) -TOE2(2)        --------->YAB1       --------->CCA1(2)          <-----------GT1  ----------->GT1  <- -TOE1(2)       <---------ZAT6       <---------ARR11(3) ---------->DOF2  --------->ICU4--------->ARR14(2)   tgagattatctggtgatactgataagtgatgaaaagatagatataagtaagagtgattaaaaggaatttactgaaatgttgaatatgtaaatctggacag  4386500                                   ------->TEIL                          --------->ATHB51                          --------->AHL20(2)                          -------->ATHB1                         --------->ICU4                     ------------>CBF                     <---------MYB59                    --------->ANAC58------------>CBF             ---------->DOF2<---------YAB1          <-----------TBP<---------ATHB51        <----------DOF2  <---------ATHB12                                             <-----------GT1        --------------->AGL15      >>>>>>>>>>>>>>>>>LFY               ------>ZmHOX2a(1)        <---------------AGL15 --------->YAB1     <---------YAB1<------------CBF   <-----------TBP -----------CBF     --------->ANAC58--------->MYB46(3)<---------AHL20(2)        ------>ZmHOX2a(1)   acattgttttctttataaagagacccaattattcatgaaccaatgtctattcttattttttcttgaattgtcctatccattcctatttatactctgtctt  4386600                             <---------AHL20(1)                         <------------CBF                             --------->AHL20(2)                    ------>ZmHOX2a(1)                             <---------AHL20(2)              <---------ICU4    <---------ANAC58                          <---------AHL20(2)               <-----------GT1     <---------ANAC46                        <---------AHL20(2)                <-----------GT1      <---------ANAC58                 <-----------GT1  <-----------GT1     <---------ZAT6<---------TOE1(2)  <---------ZAT14   atatttagctattttcatgtttccatattattttattttctgtcttcttgatactagttttaaacattcctatgtattgtttcttggagtccagttgtac  4386700                                            <---------ARR11(3)                                      --------->ANAC58                                      --------->AtLEC2                <---------DAG2          <-----------GT1             --------->ANAC46                <----------DOF2   <---------AHL20(2)                 --------->ANAC58             <-----------GT1   --------->AHL20(2)        --------->ARR14(2)              <---------AHL20(2)                  ----   <---------AHL20(1)        <---------ARR14(2)              --------->AHL20(2)      --------------->AtSPL8   agcattttatttatactatatggtctattcatatatggccaagcaatttcttctctatgtcatttaaataaacttttccaaggatgttttgttccatatt  4386800                                     <---------At4g35610                                     --------->At4g35610                                <---------ANAC58        <---------At4g35610  <----------DOF2                                                  ------- <------MYB46(1)          <-----------GT1    --------->TOE2(3)                                <------ <------MYB83         --------->ATHB12       --------->TOE1(3)            --------->AtLEC2 <---------ALFIN1 ----->ATHB12  ---------->DOF2  <---------ANAC58              <---------ZAT14            ----------->RAV1(1)   gtttggtttcagaggctcaaagacttattgactttcttgagcttaaaccttagcaaaccaagactgaagtagtttgatgcaaaacagagtccaacacatg  4386900  Previous    Next  AGI:  At5g13620.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G49290.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72326.1) Range:  from: 4385388    to: 4386376    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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