Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <-------GAMYB                     ------------>AtMYB77                  <-----------GT1                  --------->MYB52(1)                                                    <----------DOF2                  <---------ICU4                           <---------DAG2              <---------DAG2               --------->YAB1     --------->CCA1(2)        <----------DOF2          <-----------GT1 -->AGL3  --------->ICU4----------->GT1           <----------DOF2          <-----------GT1    <------   tggagaagagaaatgactaataacgacagttatatgatatggtcttaagacactttgatcacttttgttcttgaattttacatgttttgcctttttcttt  4382600               <----------DOF2              <---------ANAC58              <---------ANAC58              <---------ANAC46          <---------ANAC58          <---------ANAC46      <---------ANAC58                                               ----------->GT1      <---------ANAC58                       --------->At5g28300 <---------YAB1     <---------ICU4                         ----------->GT1 --------->MYB59    --------->ICU4                       ------>NtERF2      <---------TOE2(3) ----DOF2 <---------ANAC58            <---------LBD16   <---------AHL20(2)<---------AHL20(2)    -----   tatgcaattcttgcttgcttatagggtttgaaagactacatgcggacagtaaaactattttttaggtatgatagaaaaaattggtcttctagtgaataga  4382700                                                     <---------ARR11(3)                                                     --------->ARR11(3)                    <---------ARR11(1)               --------->GLK1(2)                    --------->ARR11(3)              --------->RVE1(1)                            ----               --------->AtLEC2                 <---------HSFB2a(2)                           -------          <-----------GT1                  --------->HSFB2a(1) <---------At4g35610        <----------DOF2  <-----------HVH21<---------CCA1(2)       <---------HSFB2a(1) --------->At4g35610     <-----------GT1 ----->DOF2 --------->MYB46(3)    ------->TEIL  --------->HSFB2a(2)                    <---------AHL20(2)   aagtggtcactgtaaccattcaaatctttcaatatgcatccaagaattttctaaaaatcttgttcatctcacaactatatatcaaaaatttactttgtcc  4382800                                                           --------->GLK1(1)                                                           <---------GLK1(1)                                                        --------->LBD16                                                        ------>ZmHOX2a(1)                                                      ------>ZmHOX2a(2)                                                     <------ZmHOX2a(2)                                                    <---------GLK1(2)                                                    --------->ARR11(3)                                                    <---------ARR11(3)                                                    --------->ARR14(2)                                                    --------->AGP1                              --------->ARR14(2)    <---------ARR14(2)                              <---------MYB52(1) --------->HSFB2a(2)        <---------MYB52(1) --------->ATHB12            <-------GAMYB       <---------HSFB2a(2)       <---------RAP2.6(3) -->ZmHOX2a(1)               <-----------HVH21--------->GLK1(2)           <---------ANAC46 --------->YAB1 --->ID1            <---------ICU4        --------->AHL20(2)   <---------YAB1   <-----------GT1   tagttattgggcctaagacccataaatactcggttacccaaaaaaaaaattctagatcctgaattctgatacactgccgttttttcaattctatcttcac  4382900                                    --------->LBD16                             <---------MYB52(1)                         ------->MYC2             --------->ANAC46                      --------->YAB1                         <-------MYC3             --------->ANAC58                      <--------ATHB1                         ------->MYC3           --------->MYB52(1)                      -------->HAHB4              --------->ANAC46     ----------->GT1--------->ANAC58                      <---------ICU4              --------->ANAC55(1)  <---------ANAC46                                    --------->ICU4      <---------ANAC46   <-------MYC2         --------->MYB46(3)    --------->ARR14(2) <---------ATHB51     ---------->ID1 ------->GAMYB  <---------ANAC55(2)           ------------>CBF    --------->YAB1 <---------ANAC58 ---------->DOF2  <---------ANAC58    --------->ANAC58            <---------YAB1   - <---------ANAC58--------->MYB52(1)<---------ANAC58    --------->ANAC58 <---------------AGL15   <----   aatgcttgtcgtttacacataacagcacgttgttagtccgtgaaataaacaaacggcacgcataaaccccaatactcaaacaagtattaataattctgct  4383000                            <---------ARR11(3)                       <---------MYB46(3)                 <---------ARR14(2)                 --------->ARR14(2)                *TSS <-------GAMYB                <------NtERF2                                                            <---------ANAC46                --------->ATERF1(1)                                                      --------->O2               <---------DEAR3(2)                                                        <---------O2               <---------ERF1 ------>ZmHOX2a(2)                                        <---------DOF5.7(2)               <---------RAP2.3(1)                                                    ----------->HVH21               ------>NtERF2--------->ARR11(3)                                        --------->WRKY12               <---------DEAR4(2)                                                     --------->WRKY38(1)              <---------RAP2.6(2)                                                    <---------MYB52(1)              <---------DEAR3(1)                                                     --------->DOF5.7(2)              <---------RAP2.3(2)         --------->WRKY38(1)                 <---------ANAC58              <---------RAP2.3(3)         ----------->HVH21                   <---------ANAC58 <-----             --------->RAP2.6(3)         <---------MYB52(1)       --------->ANAC58  <-------GAMYB             --------->ATERF1(1)        <---------At4g35610       --------->ANAC58  <---------At4g35610     <------NtERF2  <-----------RAV1(1) --------->LBD16           ----------->GT1  <---------ANAC46 -------->MYB59<---------ATERF1(1)      --------->At4g35610      --------->DAG2    <---------ANAC58 ------DOF2 <---------ATERF1(1)       <---------LBD16           ---------->DOF2    <---------ANAC58   attaggcagagagagggcggctctgttgttgatcttcttctccggtgactcttactctctgtgtaaaaaagcaaaatgatgcgttccgttgacgtctacg  4383100                                                                      ------>NtERF2                                                                    --------->ATERF1(1)                                                                   <---------At4g35610                                                                   <---------ATERF1(1)            <--                                                                   --------->At4g35610            <--                                                    --------->At4g35610                           <--                                                    <---------At4g35610                        <-----                    <---------DEAR3(2)     <-----------GT1        <---------DEAR3(1)          <------                    <---------MYB46(3)   <----------DOF2        <-----------HVH21            <-------                   --------->SPL7       ------>ZmHOX2a(2)   --------->TOE1(2)                <-------                  <---------MYB52(1)    <---------ICU4      --------->TOE2(3)            <---------DAG2                 <-----------HVH21    <---------ARR11(3)    --------->TOE2(2)            <----------DOF2 ----ANAC46 <---------ALFIN1          --------->ARR11(3)   <---------HSFB2a(1)        <-----------GT1   tgaaaactctaggccctcccgtccgttcaattctctactcgatctttacctctcagcaaaaaccttcgtcgctgccttcgcttccatttcacttttcgtt  4383200            --------->KAN4(1)            <----------TaMYB80            <---------KAN4(1)            <---------HSFB2a(1)            --------->HSFB2a(1)            --------->HSFC1(2)           <---------KAN4(2)           --------->ARR14(2)     <---------DEAR3(1)  --------->MYB52(2) --------->SPL7 <-------TEIL -------ANAC46                                                                              --------- -------ANAC58    <---------ALFIN1                                            <---------ARR14(2) -------ANAC58 <-----------GT1                                                --------->ARR14(2) ----MYB52(1)--------->KAN4(2)          <-------GAMYB                      <---------TOE2(3)<-------- -GAMYB<------NtERF2    <---------MYB52(1)     --------->GLK1(1)  <---------YAB1      <---------ARR11(3) --ANAC58  <---------ARR14(2)          <---------ANAC58          <---------TOE2(3)   --------->GLK1(1) --ANAC58  ---------->TaMYB80          <---------ANAC58         <-----------GT1    --------->LBD16   gcgttcgtcgtcgaatattcccactcgttgtttctccaatgtcgttgcgaaatccaattctccgatttacgattttcaaggattccgaaatctcttcact  4383300                                                     --------->ZAT2                                                     <---------At4g35610                                                     --------->At4g35610                                                  <---------At4g35610                                                  --------->At4g35610                                                  <---------ZAT2                                                  --------->ZAT2                                                 ----------->RAV1(1)                                                <-----------RAV1(2)                                                <------NtERF2                                              --------->RAP2.3(2)                              <-----------HVH21--------->LBD16                             --------->DEAR3(1)--------->At4g35610                             --------->O2     ----------->RAV1(1)                 <---------TOE1(3)                             --------->TGA1a  --------->ANAC46                    <---------TOE2(3)                             <---------O2     --------->RAP2.6(2)                 <---------AtMYB61                             <---------TGA1a--------->ZAT2                    <---------At4g35610                             ========================MYC_MYB                  --------->At4g35610                             --------->ANAC46 --------->DEAR3(1)              <---------ZAT2                       <---------ATERF1(1)  <---------At4g35610        --------->At4g35610                       --------->AtMYB61    --------->At4g35610      --------->YAB1   <-------TEIL --------->ZAT18       ------>NtERF2   <---------At4g35610         --------->GLK1(2) <--------P >ZAT14               --------->DEAR3(1)  ---------->CDC5      --------->YAB1 --------->ZAT2 -ZAT14            --------->ANAC46    --------->At4g35610   --------->GLK1(2)----------->RAV1(2)----   gagagggctatctcttcgtctacgacgacccccgtcgcttctgctcagccgcagcagcttcagaatcagaatcagcatccagctgaggttgatgaagaga  4383400                                                  <-----------GT1                           ---------                                            <---------At4g35610                          --------->DAG2                        --------->ANAC58 <---------ANAC58                               ---------->DOF2             <----------ID1<----------DOF2  <---------ZAT2                          <----------DOF2--        <----------DOF2 --------->ANAC58 <---------ANAC58                           --------->TOE1(3) ----->GLK1(1)<------ZmHOX2a(1)      ------>ZmHOX2a(1)         ----------->GT1      --------->TOE2(3)   tttctatgggcttagaggacgaagccaagctttctattcctgtgcgagcttatttcttctccactaggtataattttgttcacaaactttaaaagtggat  4383500  Previous    Next  AGI:  At5g13610.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G69380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69016.1); contains InterPro domain Protein of unknown function DUF155 (InterPro:IPR003734) Range:  from: 4383016    to: 4385032    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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