Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <---------ZAT14                                           --------->ZAT14                                    --------->ANAC58                  <---------ANAC46                                    --------->ANAC58             <---------ANAC46                 ---                                  ---------->DOF2          --------->DAG2                       <----    <------ZmHOX2a(1)          <------NtERF2          <---------At4g35610                     <------  <---------TOE2(3)            --------->RAP2.3(1)    --------->At4g35610                   <-------- --->ETT(2)                  <---------DEAR3(1) <---------At4g35610 --------->ZAT18      --------->ICU4 ->REM1(2)                  <---------At4g35610 --------->At4g35610--------->ALFIN1      <---------YAB1   acataaggatgcaatttggagaaagtttgaagcggcgaaagccactggagagcggaagcagaaggcgaagtggagtagacaattagcagtgaagattgac  4344300                                             --------->ALFIN1                                             <---------ANAC46                                           <---------ANAC46                                          <---------AtMYB61                                          --------->ALFIN1                                         <---------ZAT14                                        --------->ALFIN1                                  <---------ARR14(2)                                  --------->ARR14(2)                             <---------ARR14(2)                             --------->ARR14(2)         --------->ANAC46 --------->LBD16--------->ZAT14    <------ZmHOX2a(1)    --------->LBD16<---------ANAC46   --------->ZAT18    ------>NtERF2   --------->LBD16                                   <------ZmHOX2a(1) ------>LBD16         --------->ABI4(2)<---------MYB52(1)                           ------>ZmHOX2a(2) -----LBD16        <---------ANAC58 ------>ZmHOX2a(2)         --------->ARR14(2)  <---------ARR14(2) ---WRKY18(1)      <---------ANAC58<------ZmHOX2a(2)          <---------ARR14(2)  --------->ARR14(2) -WOX13(1)        <---------DEAR3(1)<---------LBD16      --------->MYB52(1)      <------ZmHOX2a(1)   cggagaggactacgacaacttcggtgccccgaattcgatccggtgtggtggagacggagtaagggataggctcgagagtgagaggatcgaggaccatagc  4344400                                           --------->ATERF1(1)                                         --------->ALFIN1                                         <---------DEAR3(1)                                        <---------LBD16                                      --------->DAG2                                  <------NtERF2                                 --------->LBD16             --------->At4g35610                 ----                                --------->DEAR3(1)           <---------At4g35610              <------                               <---------LBD16<------ZmHOX2a(1)   ------>NtERF2           <<<<<<<<<<GATA-1          <---------ANAC46  --------->ZAT18<------NtERF2 <------ZmHOX2a(1)         --------->ALFIN1   aatggaaatgcagcgagtatcaagagagagttcgccggagaaggcggaggagagagtgaggagagcggagccatggattatggaggtgttgaaatcgagg  4344500                                                   --------->ALFIN1                                           ----------->HVH21       <------NtERF2           <---------ANAC58                            ====================================HOX2a_HOX2a                <---------ANAC46                   --------->ALFIN1   --------->GLK1(2)        <---------ANAC58            <---------ANAC58                 <---------ANAC58    --------->ARR14(2)        <---------ANAC58        <---------ANAC58                 <---------ANAC58    <---------ARR14(2)  <------ZmHOX2a(2)             <---------ANAC58                 <---------ANAC46   ============================HOX2a_HOX2a           <---------HSFC1(2) ----->ALFIN1   <-------TEIL<------ZmHOX2a(1)---------->DOF2  <---------MYB46(3)      --------->HSFC1(2) ---TOE2(3)----------->RAV1(1)      <------ZmHOX2a(1)--------->ALFIN1                --------->GLK1(2)   tagagggagagagcgacatgcgtggtgagaggatgagaggaatcggtgaaagagtgtggatcaatgggtgccattgctgagtgagagaagcttgcttagg  4344600                <<<<<<<<<MYB1                <<<<<<<<<MYB2                                                                      <-               <-------GAMYB                                                                     ----              <---------MYB46(3)                      ----------->GT1                           <----           ------------>AtMYB77                       <----------ID1                            -----        --------->DAG2                        ----------->GT1                                 -------      ---------->DOF2                   ---------->DOF2                                      <-------     <------ZmHOX2a(1)             ----------->GT1  ---------->DOF2                       <---------AHL20(2)   <---------TOE2(3)     --------->ALFIN1--------->DAG2                   *TSS       ----------------   gttttgaggaaaggggcagttagagaggtggagaagagagtataaagcgggagaaaaagaaaaaatgaagaattgttgttcgatggtaccattttatgat  4344700   <---------AHL20(2) --------YAB1                                       --------->DAG2             --------->DEAR3(1) ----->YAB1              <------MYB83              ---------->DOF2        --------->MYB52(1) -----YAB1               <------MYB46(1)       --------->ZAT18      <---------ARR11(3) ------>GT1         <---------AHL20(2)         <---------ZAT18      --------->ARR11(3) -->YAB1            --------->ATHB51   <--------HAHB4           <---------MYB52(1)           -------- --YAB1            --------->ICU4    --------->GLK1(2)         <-----------HVH21------>NtERF2-------- ->AGL3  ------->TEIL   --------->MYB59--------->ATHB12    ------------>MYB.PH3(1)          ---------   gataaataatgtatttttggaataatttggttaatggagaatcatttagtgcataaagttgaaaccgttagatattaaacggcgactaaatacaatgtta  4344800                                    ------>MYB83                                    ------>MYB46(1)                                   ----------->RAV1(1)                                  --------->AtMYB61                                 <---------MYB52(2)                                 --------->MYB46(3)                               --------->RAP2.6(2)       -------->P                            ------>MYB83                ------->GAMYB                            --------->ANAC58         <-----------GT1                            --------->ANAC58        <-----------GT1                            ------>MYB46(1)     <---------RVE1(1)                       --------->ANAC58    --------->LBD16--------->MYB46(3)                       --------->ANAC46    ------>ZmHOX2a(1)   <----------DOF2                       --------->ANAC58   --------->TOE1(2)------->GAMYB                           -- ->YAB1               --------->ZAT18--------->MYB46(3)--------->MYB46(3)                <----------DOF2 ->TOE2(3)       ---------->DOF2------>NtERF2  <---------ARR11(3)      <---------ANAC58--------->At4g35610 -->GT1      ------->TEIL   --------->ANAC46   --------->ARR11(3)      <---------ANAC58<---------At4g35610   aacccaagttggatgaaccaaaagcacaccaagccaccaacaatcctgagatttttaacaaccatctttttgggcttgagcctctattgagcttcaagtt  4344900                                                                                                   <-                                                                                                   --                                               --------->MYB52(1)                               <----                                            --------->ANAC46                               --------->ATHB51                                           ------->GAMYB                                   --------->ATHB12                                          <---------MYB52(2)                               <---------ICU4                                          --------->MYB46(3)                     <-----------GT1<----   <-------TEIL                         ----------->RAV1(1)         <---------AtMYB61     <---------YAB1 ------->MYB59                         <----------ID1  <-----------GT1  <-----------HVH21 --------->ICU4   ttaggtccatgagttatacactcacacgagtaatctacttagcaacaaacaacgagtttacattttggtattggtgtcagatttatcgtctcattatttg  4345000  --------->ZAT6 --------ZAT18 <------ZmHOX2a(2)                          ----------->GT1                           < ------->ZAT14<---------ARR11(3)                  --------->ANAC58                                <-- --MYB46(1)   --------->ARR11(3)                  --------->ANAC58                             <----- --MYB83--------->YAB1--------->GLK1(2)         ---------->DOF2                               -------   gtgaactctattacaagatcaaacaatctatttgtttttgcatttggctcaaaagctacttggtaaaaacttcgccaaaaaaaaaaactctcagtaaaaa  4345100      <---------YAB1    <--------HAHB4    --------->ATHB51    -------->ATHB1    --------->YAB1                                            <---------YAB1    <---------ICU4                                           <---------TOE2(3)    <---------AHL20(2)                                     ----------->HVH21    --------->AHL20(2)                                  <---------MYB46(3)   --------->ICU4                                      <---------AtMYB61   <---------ATHB51                              --------->GLK1(2)               ----------->GT1 ---------YAB1                                 <---------AHL20(2)             <------ZmHOX2a(1) ---------GT1                              --------->YAB1<-------GAMYB <---------YAB1    --------->MYB52(1) ----ICU4     ------>ZmHOX2a(1)     <----------ID1     <---------YAB1<---------------AGL15        --- -->ICU4  <-----------GT1  <---------MYB46(3) --------->AHL20(2)     --------------->AGL15        <--   ttacaattattttttcctgatggtttaagttgttgatgacaacaaatataaaatctgatggttgacgattactactattaggagagtcaataaacgggtt  4345200  Previous    Next  AGI:  At5g13520.1    Description:  peptidase M1 family protein. similar to APM1 (AMINOPEPTIDASE M1) [Arabidopsis thaliana] (TAIR:AT4G33090.1); similar to hypothetical protein OsI_013590 [Oryza sativa (indica cultivar-group)] (GB:EAY92357.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41537.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78027.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Peptidase M1, membrane alanine aminopeptidase; (InterPro:IPR001930); contains InterPro domain Peptidase M1, leukotriene A4 hydrolase, aminopeptidase C-terminal; (InterPro:IPR015211); contains InterPro domain Peptida Range:  from: 4341951    to: 4344674    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version