Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------ANAC58                                                                                   <---------ANAC58                                                                                  --------->ABI4(2)                                                                                  <---------ZAT2                                                                            --------->MYB52(1)    --------->ANAC58                                                       --------->MYB46(3)    --------->ANAC58                                                 <---------ARR11(3)   --------->WOX13(1)                                               <---------CCA1(2) -------AHL20(2)                                                   <---------AHL20(1) ----->AHL20(1)                                                    <---------ARR11(3) ----->AHL20(2)          ---------->DOF2        --------->YAB1     --------->ARR11(3) ------AHL20(1)--------->DAG2           <---------At4g35610  --------->TOE2(3)   --------->ALFIN1 ---->YAB1   ---------->DOF2            --------->At4g35610 <---------ANAC55(2)------->GAMYB    -----   ataatcaagcagtacaaaaggttctaacaaagaaatactgtgagcagcaatgggaatacattacctgaatatatctaacaacggtgctggtgtaatcaac  4331300                                                           --------->REM1(1)                                                         ----------->RAV1(1)                                                       <------NtERF2                         --------                                                    --------->At4g35610                   --------->YAB1                                             <<<<<<<<<<<<<<<<<LFY              XXXXXXXXXXXXXXXXXXXXX>MIR2935          --------->REM1(2)                 --------->ETT(2)                  <---------AHL20(2) ---->MYB46(3)  <----------DOF2             <---------ETT(2)                 --------->AHL20(2)   agctcttctctgtgtatgctttctcattcgtttcgccccaaaactgtctacattggctgcaacatcagacagagagacattaaatctcacagtcatcact  4331400                                                         <---------MYB46(3)                                                      <------MYB83                                                      <------MYB46(1)                                                      <---------MYB46(3)                           --                                                     --------->ALFIN1                    --------->MYB52(1)                                                     <---------DEAR3(1)                 ----------->HVH21                                                     <---------AtMYB61                --------->At4g35610                                               <---------ZAT2  <---------LBD16        <---------At4g35610                                             <-----------RAV1(2) <------NtERF2       --------->GLK1(2)                                  <-----------HVH21<---------ANAC58           <---------ZAT6       --                               <---------At5g28300 <---------ANAC58    <---------TOE2(3)----------->TGA1      ---------->DOF2         --------->MYB52(1)  <---------MYB46(3)<---------WOX13(1)--------->ZAT2- ->ZAT6             ---------->DOF2        ------>NtERF2<---------AtMYB61   --------->MYB52(2)    ---   aatccgataaaaggaagacgctcaaagtctacttacggtcgaaggggccagatgggtggtggtagtcgggattgatgttagtggaagaagctgacgactg  4331500                                                     <-------TEIL                                                   <---------SPL7                                                  <---------ANAC46                                                  <---------ANAC58                                                  <---------ANAC58                                                <---------ATERF1(1)                                                --------->LBD16                                                ------>NtERF2                                               --------->DEAR3(1)                                               --------->ATERF1(2)                                               <---------DEAR3(1)                                               <---------ATERF1(2)                                               --------->RAP2.3(2)                                              <------NtERF2                                              <---------LBD16                                              --------->RAP2.6(1)                                              --------->ATERF1(1)                                              --------->ORA47(2)                                              --------->RAP2.3(1)                                              --------->ERF1                                              --------->DEAR4(2)                                             ------>NtERF2                                             <---------ATERF1(1)                                             --------->ABI4(1)                                             <---------RAP2.3(1)                                            --------->ATERF1(2)                                            --------->RAP2.3(2)                                            --------->RAP2.3(3)                                            <---------ATERF1(2)                                            --------->DEAR3(1)           <-------GAMYB                    <---------DEAR3(1)          --------->MYB52(2)               --------->ATERF1(1)          --------->MYB55(2)               --------->DEAR4(2)          <---------MYB46(3)               --------->ERF1         <---------AtMYB61                 --------->ORA47(2)         --------->ALFIN1                  --------->RAP2.3(1)        <---------MYB52(1)    ----------->RAV1(2)<------NtERF2            ----------->GT1      <---------DEAR3(1)      --------------------->WRI1                --------->ZAT14   --------->ATHB12        ------->TEIL<-----------ARR10                <---------ZAT14 ------->LBD16           --------->ZAT14  <---------RAP2.3(1)      --------->LBD16 ---->NtERF2 <---------MYB46(3)       <---------CCA1(2)           --------->ANAC46 -------->bZIP60(2) <---------At4g35610--------->ARR14(2)        <---------LBD16 <---------AHL20(2) ------>RAP2.6(2)   --------->At4g35610<---------ARR14(2)<-----------RAV1(1)    --------->AHL20(2)  -   ccgcatcatcggtggttgtggcatctgtgaacccctgtgcatatcgccgccggcgtacattgttgcccacggagaacagtgatttattcgaatcgaaggg  4331600                                                  <----------DOF2                                             ------>ZmHOX2a(2)                                           <---------ARR14(2)                                           --------->ARR11(3)          <---------ARR14(2)                                           <---------AGP1<---------ANAC58                                           --------->ARR14(2)    <---------CCA1(2)                                           <---------ARR11(3)<---------ANAC58                                          <---------CCA1(2)--------->ALFIN1                                        --------->ALFIN1 --------->ALFIN1  <---------HSFB2a(2)                           --------->TOE1(3)--------->GLK1(1)<---------ANAC46                    ----                           --------->TOE2(3)<---------GLK1(1)<---------ANAC58              ------->GAMYB                    --------->MYB59   <---------ANAC58   <---------ANAC58  --------->HSFB2a(2)-------     ---------->DOF2<---------TOE2(3) <---------ANAC58 <---------ANAC58<---------GLK1(2) --------->ANAC58 -------->TOE1(2)   <---------TOE1(3) <---------ANAC46 <---------ANAC58--------->ARR14(2)--------->ANAC58   aaactgcgaaagtgttcgaatttaggttaccttgaaacgagcgtggatctctctttagggtgtgcgtgtatcaaattcgcgaattgatgacaacccaaga  4331700                                                          --------->AHL20(2)                                                  ----------->GT1                                              <---------ZAT14                                              --------->ZAT14                                     <--                          <---------YAB1   <---------ANAC58  --------->ARR11(3)              --------  *TSS ------------>CBF --------->YAB1     <---------ANAC58  <---------ARR11(3)           <------NtERF2 ----->At4g35610       --------->ICU4      <---------ANAC46<---------AHL20(2)           <---------LBD16 --->DOF2       ----------->GT1      <---------ATHB51----------->GT1         <-----------GT1 --------   gcagagaagtacaatgggtagagaaatgatgagaagtcgataatggagtgaagagtagaaataaatcttagggtttttttttcttccttctcggcaagcc  4331800                <------MYB83                <------MYB46(1)                <---------DEAR3(2)               <---------DEAR3(1)              <---------MYB55(1)             <---------MYB52(1)        ------>ZmHOX2a(2)                  --------->YAB1                   <---------DAG2 --------->TOE1(2)    <-----------GT1 --------->AHL20(2)            <------MYB83 <-----------GT1 -------ALFIN1<--------P              <---------AHL20(2)            <------MYB46(1)               <-- ->ANAC58   <---------DEAR3(2)     --------->YAB1               --------->ATHB12 <---------AHL20(2)<- ->ANAC58   <---------SPL7    <---------TOE2(3)       <---------ATHB12      <----------DOF2    <-----   aaaccctcgatcgccggtcggttttaaccgataagattaataaaatcatcaaactaatcaagaagtcgattggtttagcttttttaatctccacgatttt  4331900                                                 ------>MYB83                                                 ------>MYB46(1)                                         <---------ANAC58                                         <---------ANAC58           <---------AHL20(2)           --------->MYB52(2)          <---------AHL20(2)    ------->TEIL     -------->P                                         <      <------------------------ANAC81  <-----------GT1   --------->WOX13(1)                        --   <---------AHL20(2)      <---------ANAC58    <---------MYB59                                    --- -------AHL20(2)           <---------ANAC46   <---------ANAC58                               <------- --------AHL20(2)          <---------ANAC58   <---------ANAC58                               <------- ----AHL20(2)  <---------AHL20(2)   ----------->GT1    <---------ATHB12                      <-------   tttatttttttttttatttttttttttttgggtgtatgttgttacttggcctaccctatcaattagacacatatgttcaggctgaactatgtattgcgag  4332000                                                                                         --------->LBD16                                                                                       --------->MYB46(3)                                                <--------P                            <---------At5g28300                                               <-------GAMYB                          -------->P                                               <---------MYB52(1)                  <---------MYB52(2)                                              --------->LBD16                 --------->ANAC58                                            <---------LBD16             <---------ARR14(2)                                           --------->MYB52(1)           ------->TEIL------->GAMYB                                          <---------SPL7                --------->ARR14(2)        <--     --------->MYB52(1)                  <----------DOF2               <---------CCA1(2)------->GAMYB ------ZmHOX2a(1)                      <------NtERF2                 --------->ALFIN1--------->MYB52(1) --------->GT1                        ------>NtERF2                <---------ANAC46<---------MYB46(2) -------->GT1                        <---------DEAR3(1)           <------ZmHOX2a(1)<---------MYB111(1) --ANAC46                           --------->ATERF1(1)        <---------HSFB2a(2) --------->MYB46(3) --ANAC58                           <---------MYB52(1)    --------->ANAC58    --------->ANAC58    <-- --ANAC58                          <-----------HVH21      --------->ANAC58    --------->ANAC46    <--   taggaaataacggatgagtttgtttagtaaacccatccgtcggccttccggttgatcaacaagctcgaggagtgtatcttaagcaactaaccgcgagatg  4332100                                                                      ------->MYC2                                                                      <-------MYC3                                                                      <-------MYC2                                                                      ------->MYC3                                                                     <---------O2                                                                     --------->O2                                                                     --------->ANAC55(2)                                                                     <---------ANAC55(2)                                                                     --------->ANAC58                                                                     ============================bZIP_DOF                                                                     --------->ANAC58                                                                     ============================bZIP_DOF                                                          ==============HOX2a_HOX2a          ------>ZmHOX2a(2)                               ------>ZmHOX2a(2)         <------ZmHOX2a(2)                               <------ZmHOX2a(2)         --------->CCA1(2)                               ==========================HOX2a_HOX2a        <---------ARR14(2)                               ===============HOX2a_HOX2a        --------->ARR14(2)                              <---------ARR14(2)        --------->ARR11(3)                          <---------At4g35610----------->HVH21        <---------ARR11(3)                     <---------ARR14(2)    --------->TGA1a        <---------AGP1                         --------->ARR14(2)<------ZmHOX2a(1)        --------->AGP1                    <---------ANAC46=========================HOX2a_HOX2a       --------->RVE1(1)   <------ZmHOX2a(2) <---------MYB46(3) ----------->HVH21    ---------->DOF2       --------->ARR11(3) ----------->ARR10  --------->ANAC58          ---------->DOF2 -------ANAC58            <---------ARR11(3)--------->ALFIN1    --------->ANAC58      ---------->DOF2 -------ANAC46  --------->ARR14(2)  --------->GLK1(2)   --------->ARR14(2)  <------ZmHOX2a(1)   <---- -------ANAC58  <---------ARR14(2) <---------GLK1(2)<---------LBD16  <---------TGA1a<---------YAB1  >   gcatgaaaaagatctgaagaactgttgagatcaacgagattctagggtggatactgcggatcgggcaggacacgtgaaggacgactataaaagaaagagg  4332200  Previous    Next  AGI:  At5g13480.1    Description:  FY. similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G67320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42873.1); similar to WD40-like [Medicago truncatula] (GB:ABO83643.1); similar to putative OsFY [Oryza sativa (japonica cultivar-group)] (GB:ABA12455.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 4326531    to: 4331702    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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