Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->ANAC46          --------->ANAC58          --------->ANAC58         ------->TEIL                                ------>NtERF2               --------->AtMYB61 ------ANAC55(2)                        --------->ANAC58                        --------->MYB46(3)--- ------ANAC46                           --------->ANAC46                        <---------ATHB12  <-- ------ANAC58 ------>NtERF2             --------->ANAC58                <---------ICU4            --- ----->ANAC55(2)                     <---------ARR14(2)            ------>ZmHOX2a(1)              <-- ------ANAC58--------->DEAR3(1)      --------->ARR14(2)           --------->TOE2(3)      --------->AtMYB61   cgtagaacatgaacgccaccatgttcaccgagagtccgaaatacgccattctctctgccatttcatttcctaaaacattgcaaccattccaccaaaacta  4298800                                                                                  <-----------------AG         --------->ANAC58                                                       <---------ALFIN1         --------->ANAC46                                                       ------->GAMYB         --------->ANAC58                                                       --------->AtMYB61        ------->TEIL                                                           <---------MYB111(2)      <---------ZAT14                                                          --------->MYB46(3)      --------->ZAT14                                                          <---------MYB52(2)      <---------ZAT18                                                         -------->P --------->HSFB2a(2)    --------->ANAC46                                                          ------>MYB46(1)  <---------ALFIN1                                                            ------>MYB83     ------ --------->ZAT18                                                    --------->TOE1(2)    <---------HSFB2a(2) --------->ZAT14                                                   --------->At4g35610<---------ARR14(2) <---------ZAT14                                                   <---------ZAT2 <-----------------AGL1 ------>ZAT2                    <---------REM1(1)                  <---------At4g35610--------->ARR14(2) -------At4g35610        --------->GLK1(2)          ----------------->AGL1<------ZmHOX2a(2)   ------- ------>At4g35610    --------->YAB1          ---------->DOF2       --------->ZAT2--------->MYB52(1) -------ZAT2        <---------ZAT6       ---------->DOF2        ---------->DOF2<---------MYB55(2)   agctgcactgcacgtagaactactgataatctagatgtaagtgaaaagaaagttaccaaaaatgaagaaagctgcgatccaaccaccggttttggaaaga  4298900                                       <---------LBD16                     <---------At4g35610                                      ------>ZmHOX2a(1)                 <---------MYB52(1)                                  --------->ARR14(2)              =============MYC_MYB                                  <---------ARR14(2)              <---------O2                                <---------MYB46(3)                --------->O2                      <                               <---------AtMYB61   --------->ANAC58    <-------GAMYB              <--                       <---------DOF5.7(2)  ---------->DOF2       <---------TGA1a                 ---                       --------->MYB52(1)   ================================bZIP_DOF            ----- --->ATHB12          --------->DOF5.7(2) --------->LBD16          --------->TGA1a               ----- -->ICU4          ------->TEIL --------->ALFIN1    --------->ANAC58   <---------MYB46(3)        -----   ttggcgatgggtttgccatggatgttaacgggagtggttcctccggtatagccacggccaagagcaagacgtctgttatctgattctatgaagaacacac  4299000                                       <---------LBD16                                      <---------LBD16                                  <---------GLK1(2)                                --------->LBD16                               --------->LBD16                               --------->ANAC46                              <---------HSFB2a(2)                                       <---------RVE1(1)                         <---------HSFC1(2)                                      <---------YAB1                         <---------HSFB2a(1)          --------->LBD16       --------->YAB1                         --------->At4g35610         --------->LBD16        --------->TOE2(3)           <---------ATHB12   --------->HSFB2a(2)   <---------LBD16         --------->TOE1(3)         ------>ZmHOX2a(1)    <---------LBD16      <---------LBD16         --------->MYB46(3) ---------At4g35610      --------->HSFB2a(1)      --------->MYB52(1)      -------->P <---------ATHB12 -------ZAT14            --------->HSFC1(2)    --------->ANAC58       --------->ANAC58  <---------CCA1(1) ------>ZAT14            --------->ZAT2<---------ANAC46               --------->ANAC58 --------->ARR11(3) ---->ANAC58             <---------At4g35610   --------->ANAC58       --------->ANAC46--------->YAB1 ---->ANAC58            <-----------ARR10  ------>NtERF2            --------->At4g35610<---------ARR11(3) ---->ANAC46           <------ZmHOX2a(1) --------->LBD16    <---------AHL20(2) --------->YAB1   -----   tcaactgcttcctatgatgcacagaggagcttcccggagtctcggggacactcaccggggatttaatctcagaagcaaccataatcaatgatattttctc  4299100                                                                       <---------AHL20(2)                                                                       --------->AHL20(2)                                                                    <---------ICU4                               <---------------AGL15               --------->ICU4                               --------------->AGL15               <---------ATHB51             <----                              ----------------->AGL3           --------->AHL20(2)               -----                     --------->At4g35610                   --------->AHL20(2)           <---------ARR14(2)                 --------->ANAC58                          <---------AHL20(2)           --------->ARR14(2)                 --------->ANAC58              --------->At4g35610 --------->AHL20(2)   <---------ARR11(3)      --------->AtLEC2        ----------------->AGL2  --------->AHL20(2)            --------->YAB1 ---->YAB1     ---------->DOF2----------------->AGL1----------->GT1<---------AHL20(2)   --------->GLK1(2)   ataaaaccatggaaactgaaagcatcagagtgaccaaaaacagcaagagagcttaagttaataaatgaaataattaatccagccaaacaaaatctgtaag  4299200                                                                                    --------->ZAT2                                                                                    <---------ZAT2                                                                                    <---------At4g35610                                                                                    --------->At4g35610                   <---------MYB46(3)                                          <---------At4g35610                   <------MYB83                <---------------AGL15           --------->At4g35610  -                   <------MYB46(1)             --------------->AGL15           --------->ZAT2      --                --------->ARR14(2)            <-----------------AGL3           <---------ZAT2   <----              <---------YAB1                  <-----------------AG            <-----------ARR10 =====     <------ZmHOX2a(1)    *TSS----------->GT1 <-----------------AGL2       --------->ANAC46   ------- ---------->DOF2<---------ARR14(2)            ----------------->AGL3<---------AHL20(2)    --------->MYB111(1) -----At4g35610--------->ATHB12              --------->At4g35610   --------->AHL20(2)    <--------P<- ---->At4g35610<------ZmHOX2a(1)  ----------->TBP                  <---------AHL20(2)    ============   cagaaaaggatgtatgaggattggttagagaaatgtataaatgcagtagcttaaaatgggaagatggaattaaatagacggagcttagctggtaagtggt  4299300                         --------->WRKY38(1)                         --------->ZAT18                         <---------ZAT18                       <-------PIF4                       ------->PIF4                       <-------MYC3                       <-------PIF5                       ------->MYC3                       <-------MYC4                       ------->MYC4                       ------->PIF5                       ------->MYC2                       <-------MYC2                      --------->O2                <------------CBF               --------->ATHB12               <---------ICU4     <------ZmHOX2a(1)--------->TGA1a -------->CCA1(2)     <---------O2                                                      --------->ATHB12 ------->ARR11(3)     <---------TGA1a                           <------ZmHOX2a(1)      <-------TEIL ----P        --------->ICU4            --------->ETT(2)    ---------->DOF2          <---------ARR14(2) ===============================MYC_MYB --------->ZAT18   --------->ANAC58           >>>>>>>>>GATA-1 ---->GT1    <-----------TBP      <---------ATHB12     <-------TEIL                  >>>>>>>>>GATA-2 --------ARR11(3)     =================================================bZIP_DOF      >>>>>>>>>GATA-4 ===============================MYC_MYB <---------ETT(2)  --------->ANAC58           >>>>>>>>>GATA-3   agatataggactggcatttattgcacgtggactcccatgatgtccacagtttcaacgttcaagaaaggacttatttagagaaatgtggattcatttgata  4299400                                                                                               ------                                             <-----------HVH21                           <---------YAB1                                             <-----------TGA1                          <---------ICU4                                            --------->ANAC46                           -------->HAHB4                                            <---------ANAC58           <-----------GT1 --------->YAB1                                            <---------ANAC55(2)    <---------YAB1     <---------ATHB12          ---------->DOF2            --------->HSFB2a(2)        <---------AHL20(2)    --------->ICU4       ------>ZmHOX2a(1)       <------ZmHOX2a(1)           ---------->ID1            <---------TOE2(3)    ---------->ID1     --------->ATHB12     <---------ANAC58  <----------DOF2       --------->YAB1   tgttttgtccttgaaagacataaactcattgaaggacttctacaatgcgtcactgcaacttgttcttttatttttgcagtctccattaatgatgactctg  4299500                                                  --------->ZAT6                                                <<<<<<<<<<<<<<<<<LFY                                             --------->At4g35610                                      ------->GAMYB                   --------------->AGL15  --------->At4g35610        ------>MYB83               ----------->RAV1(1)        ------>MYB46(1)  --------->DAG2   <---------HSFC1(2)       ----------->RAV1(1)----------->GT1 --------->HSFC1(2)       <<<<<<<<<<<<<<<<<LFY        --------->MYB52(1)                            <-------------------     --------->MYB46(3) ---------->DOF2   <---------At4g35610                --------->AHL20(2) ----->HVH21       <---------------AGL15 --------->GLK1(2)                   <---------AHL20(2)    --   acattgaaccaacattggctactcaataaagtcaaaacaacagaagctgcttacactggtttttgtgttcacatttcattttattctaaactttctatga  4299600                                                                                     <---------AtLEC2                                                                              <------MYB46(1)                                                                              <------MYB83                                                                           <-------GAMYB                                                                          --------->MYB46(2)                                                                          --------->MYB111(1)                                                                          <---------MYB46(3)                                                  --------->At4g35610   <---------MYB52(1)             -------->P                           <---------At4g35610  ------------>MYB.PH3(2)            <-----------GT1                    <------ZmHOX2a(1)   ------------>AtMYB77     --------->YAB1                   ===============================================================    <---------YAB1                    <---------------AGL15   --------->ICU4 <---------MYB46(3) --WRI1 <-----------GT1   ----------->GT1---------->DOF2  <-----------GT1 --------->MYB111(2) --------->GT1 <---------MYB59        --------------->AGL15 --------->YAB1--------->MYB52(2)   <-----   aatgttataataacttacctcactataagggataatataactaaaaagaggaagcagaattaacatgatgaacagttagttggtgatgcatggctatttt  4299700  Previous    Next  AGI:  At5g13400.1    Description:  proton-dependent oligopeptide transport (POT) family protein. similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT5G01180.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN84143.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68709.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78165.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 4296691    to: 4299226    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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