Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                            <--------                                                                                        <---------AHL20(2)                     <---------ICU4                                                     --------->AHL20(1)               <-----------GT1                        <---------AHL20(1)                --------->AHL20(2)          <---------AHL20(2)                          --------->AHL20(1)                <---------AHL20(1)         <---------AHL20(2)                          --------->AHL20(2)        --------->GLK1(2) ----      <---------AHL20(2)                         <---------AHL20(2)        --------->YAB1   ---------      --------->AHL20(2)<-----------GT1          --------->AHL20(2) <----------ID1     --------->AHL20(2)   tataccaattttttattttacaaatattactctgtacatgtgattctgagtttaaatatatatgaccaaaactacaaaaataatctatattaaattaaat  4283100      --------------->AtSPL3      --------------->AtSPL8      <---------------AtSPL8   <---------AHL20(2)  --------->YAB1  <---------AHL20(2)  --------->AHL20(2) ------>AHL20(2) -------AHL20(2)                  <---------TOE1(2) ------AHL20(2)           --------->GLK1(1) ------AHL20(1)    --------->YAB1 <---------TOE2(2)                                                 < ----->AHL20(2) <---------------AGL15                                                          <----- ->AHL20(1)     --------------->AGL15                                    <-----------GT1 <---------YAB1 --AHL20(1)    ----------------->AGL3                             <---------AHL20(1)    --------->AHL20(1) --AHL20(2)    ----------------->AGL2                             --------->AHL20(1)    <---------AHL20(1) ->AHL20(2)    <-----------------AGL3     <---------LBD16         <---------AHL20(2)    <---------AHL20(2) -AHL20(2)  <----------DOF2--------->ARR11(3)  <------ZmHOX2a(2) --------->YAB1 --------->YAB1<------ ----->AHL20(1)<-----------------AGL2 ------->TEIL               <---------AHL20(2)     --------->AHL20(2) >AHL20(2)------->TEIL    <---------GLK1(1)   <-----------ARR10  --------->AHL20(2)    --------->AHL20(2)   ttaattaaaacgtactttctaaaataagaaatctcgtatgtatgtgcggatcaaatcgagtttgaaattatattttcacctataatacattatatttatg  4283200                                                                   <---------GLK1(1)               --                           <-----------GT1                         --------->GLK1(1) --------------->AGL15                       <---------AHL20(2)                         --------->ARR11(3) <---------------AGL15                       --------->AHL20(2)                        --------->YAB1      ------>ZmHOX2a(1) ---------YAB1        <---------AHL20(2)                        <---------ATHB12     --------->LBD16 ------RAV1(1)        --------->AHL20(2)           <---------HSFB2a(2)               ================ ---TOE2(3)    <---------AHL20(2)  <-----------GT1 --------->HSFB2a(2)          <----------DOF2    --   ttgtgattcaatttgattttttttttaaattacatttttacagaaaaatgtttctataagtgtccaatgatatccatagcatctttcctgaaattgggat  4283300           --------->LBD16         ----------------->AG     <---------ICU4   --------->GLK1(2)          ------>MYB46(1)                                      ------->MYC3   <---------ARR11(3)         ------>MYB83                                         <-------MYC3 ------->TOE2(3)         <-----------GT1                                        ------->GAMYB ==========================MADS_MADS  --------->TOE2(3)                      <-----------GT1 ------->YAB1   ----------->GT1       >>>>>>>>>RAP2.2       <---------WOX13(1) --------->MYB46(3)   <   accataatctttccgaaaatgtgatatataccatccacaatctaaaacacttgtaccacaagattgatgaccgtagtagtaaccacatggtttttgtctg  4283400                                                                     *TSS                                                                 <-----------HVH21                                                               >>>>>>>>>>ABI5                                                               >>>>>>>>>>BZIP12                                                               ------->MYC3                                                      --------->ARR11(3)                          <----------ID1              --------->ARR14(2)                        ---------->DOF2               <---------ARR11(3)           --------->AHL20(2)  <------------CBF <---------ANAC46                   <---------ARR14(2) --------->GLK1(1) --------->ATHB12--------->ALFIN1                    <---------CCA1(2)   <---------GLK1(1)     <----- --------->YAB1<------------CBF                 <----------DOF2<-------MYC3        <---------AHL20(2) -------TEIL  --------->ATHB12             --------->YAB1     --------->O2  <-----------GT1   <------   cattcattgtttctaaagattgggggaaaagacaaaactacttaatcttactttcaaatcttcaacgtgtcactgatttctccatttaaaatgtttttat  4283500                                                                   --------->GLK1(2)                -                                                                   --------->ARR14(2)               -                                                                  ------>MYB46(1)                 <--                                                                  ------>MYB83                    <--                                                                --------------->AGL15             ---                                                                <---------MYB59                   ---                                                                <---------------AGL15            ----                                                               <-----------------AGL1            <---                                                               <-----------------AGL2            ----        --------->ZAT18                                        ----------------->AGL3           -----        <---------ZAT18                                        ----------------->AG            ------        --------->ZAT14                                        <-----------------AGL3       ---------       <---------ZAT6  <------MYB46(1)                         ----------------->AGL2       ---------  --------->TOE1(1)    <------MYB83      <-----------GT1       ----------------->AGL1       --------- ------>ZmHOX2a(1)   <--------P        <---------WOX13(1)--------->AHL20(2)    ---------------------- ------GT1        --------->DAG2    <---------YAB1  ------>ZmHOX2a(1)      <---------At4g35610 <----- -----GT1       ---------->DOF2   --------->YAB1    --------->LBD16<---------ARR14(2)     <----------   ctcctcgtagtgctcaccaaaaggttggactctctatgctaattgaccctcttcctgaaaaaaataccaaatctggcaactcatccacaattttacgcca  4283600  --------->HSFB2a(1) ----->MYB46(1) ----->MYB83 -------MYB55(2) -------MYB46(2) ------>DEAR3(1) ------>MYB46(3) ----->ANAC58 ---NtERF2 ----->ANAC58 ->NtERF2 --->DEAR3(1) >ANAC58                       <----------DOF2                                     --------->ANAC58 >ANAC58                     <---------At4g35610                                   --------->ANAC46 >ANAC46                     --------->At4g35610 --------->DAG2               <---------ARR11(3) ->TaNAC69(2)    <---------ALFIN1               ---------->DOF2             --------->ANAC58     <--- ----ALFIN1    --------->AtMYB61            --------->LBD16 <---------At4g35610    --------->ANAC58 -GT1         --------->MYB46(3)           <-----------RAV1(2)              --------->ANAC58     <---   ccgaacatttcgccaaaccacacattttgtctgctttctacttcgccagggaaagtggccagagctcatctacttcgcaagaactaagcaatctcttgta  4283700                                                                                       --------->DAG2                              --------->ATHB12                               <---------RAP2.6(3)                             <---------YAB1                <----------DOF2   ------>NtERF2  <------NtERF2                <---------ANAC46                     <---------ARR11(3)      ----------->RAV1(1) ----             <----------DOF2 <---------AHL20(2)      <---------GLK1(2)      <---------ETT(1)<--------       <----------DOF2--------->ANAC58               --------->ARR14(2)     --------->ETT(2)---------    ---------->ID1    --------->ANAC58               <---------ARR14(2)     <---------ATERF1(2)  ----  <---------MYB46(3)  --------->ANAC46              <------ZmHOX2a(1) <-----------RAV1(1)  ---------- ------TOE2(3)  <---------ANAC58                 --------->YAB1      <---------YAB1  ---------->DOF2- ------TOE1(3)  <---------ANAC58       <------ZmHOX2a(1)<-----------GT1     --------->ATERF1(2)  ----   aggtttgttctttcactttcttgtaagcaatttcattggaaggacttaaaatcaggattttctttttggttattgttgccgacagtcaaaaggcagcaca  4283800     <-----------RAV1(1)   <---------ICU4                                                                               <----   --------->YAB1                                                                        <---------ARR11(3)  --------->ICU4                      <---------ANAC58                            --------->ARR14(2)  <---------ATHB12                 --------->DAG2                                 <---------ARR14(2) ----->ANAC58                     ---------->DOF2                      ------>MYB46(1)   --------->ARR11(3) -At4g35610               --------->DEAR3(2)                           ------>MYB83 <-------TEIL<---- >At4g35610               --------->MYB46(3)                          --------->MYB52(1) <---------GLK1(2) ----->ANAC58           --------->MYB52(1)                           --------->AtMYB61   --------->ARR14(2) ->RAV1(1)  ---------->DOF2------->GAMYB                            --------->MYB46(3)   <---------ARR14(2) -------->WOX13(1)      ----------->RAV1(1)               <------ZmHOX2a(1) --------->DAG2      <---- ----->ANAC46        <------ZmHOX2a(2)<---------ANAC58  <---------TOE2(3)  ---------->DOF2--------->GLK1(2)   agcaatcatgttgccaaagttcgatccaacagaccaaaaagcttgtctgtctcttcttgaggatgtgactaccaacgtaaagcagattcaagattctgtc  4283900                                                 ------>ZmHOX2a(1)                                                --------->TOE2(3)                                               ----------------->AG                                               ----------------->AGL1               --------->ANAC58           <---------MYB46(3)               --------->ANAC55(1)  --------->TOE2(3)               --------->ANAC58   --------->ARR11(3)        <---------At4g35610          <----------DOF2         <-----------ARR10         <---------ZAT2  --------->ANAC58  --------->ICU4--------->GLK1(2)      ---------->DOF2  --------->ANAC58---------->DOF2 --------->ARR14(2)    --------->WRKY18(1)      --------->YAB1 -----ANAC58   --------->ANAC46  <---------CCA1(2) --------->MYB52(1)         <---------HSFB2a(2) -----ANAC58   --------->ANAC55(2)<---------ARR11(3)   <-----------HVH21      --------->HSFB2a(2) <-- -----ANAC46   <---------ANAC55(2)<---------ARR14(2)  ------->GAMYB   ---------->DOF2    ------->TEIL   ttggaagcaatactttcacgtaatgctcataccgagtatcttagtggtttcctcaacggtcaagctgataagaaaagcttcaagaagaatgtacccgttg  4284000  Previous    Next  AGI:  At5g13360.1    Description:  auxin-responsive GH3 family protein. similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT5G13370.1); similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT5G13380.1); similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT5G13350.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78161.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68714.1); contains InterPro domain GH3 auxin-responsive promoter (InterPro:IPR004993) Range:  from: 4283469    to: 4286298    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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