Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->ATHB12                                                                    <---------WOX13(1)                                                                  --------->ATHB12                                                                  --------->ATHB51                                                    --------->At4g35610  --------------->AtSPL8                                                    <---------At4g35610  <---------------AtSPL8                                            <---------ANAC58      -------->HAHB4                                            <---------ANAC58      <--------ATHB1     --------->ANAC58                      --------------->AtSPL8 <---------ICU4     --------->ANAC58                <---------AHL20(2)          <---------YAB1                    <- ------->YAB1    <---------------AGL15     --------------->AtSPL3--------->ICU4               <------ -TEIL  <----------DOF2              --------->AHL20(2)        --------->YAB1               --------- ->CCA1(2)       ------>ZmHOX2a(1)  <---------AHL20(2)        <---------AHL20(2)           <---------ATHB51 >ARR14(2)       --------------->AGL15 <---------YAB1        --------->AHL20(2)          --------->WOX13(1) -ARR14(2)      --------->TOE2(3) --------->YAB1 <----------DOF2 <---------ATHB51      <---------ATHB12   ctcatacaagctttgattcctaaaattagattacaaaaattatttttcgtactttgctgcatatataataattgatttgtacataacaaatcaattatac  4271700                          --------->ARR11(3)                                                      ---                          <---------AHL20(1)                   --------->YAB1            --------->AHL20(2)               <---------YAB1 <---------HSFB2a(2)            --------->AHL20(2)          <---------AHL20(2) -----ZmHOX2a(2)       --------->AHL20(2)                   --------->YAB1               <---------AHL20(1) -----GT1     --------->AHL20(2)                            --------->AHL20(2)      <---------AHL20(2) >YAB1        <---------AHL20(2)        <-------TEIL       <---------ATHB12<---------MYB59    <------   gatcgaatttcaaaattttaatagataatatactggaacaaatacatatacaaatataccaataaaaataaaactgacccaattagtttattttattttt  4271800                                         <---------ICU4                                        <---------ATHB12                                       --------->ANAC58                                       --------->ANAC58                                     <---------ALFIN1                                    <---------ZAT18                                    --------->ZAT14                                    <---------ZAT14                                    <------NtERF2                                    --------->ZAT18                                   --------->ANAC58                                   --------->ANAC58                                 --------->TCP16(2)                                --------->ARR14(2)                                <---------ARR14(2)                                <---------PCF5                              --------->TOE2(2)                               <------MYB46(1)                      ------>NtERF2                               <------MYB83                      <---------At4g35610                               <---------ANAC58                  --------->At4g35610          --------->At4g35610  <---------ANAC58                  --------->ZAT2      --------->MYB52(1)      --------->MYB59  ------>ZmHOX2a(1) <---------ZAT2            --------->At4g35610 -------->GT1                 <---------MYB46(3)             --------->ZAT6 --------->TOE1(2)       - ---AHL20(2)              <-----------RAV1(1) --------->TOE2(3)  --------->ZAT14           <---------At4g35610   tagtaaaaaaacagatgaaaaattagaaatgttgggtccgcactcattccttatttgtgcataacactgctgccaaaacatgcgaagctaataagctccc  4271900                                                                 <---------ALFIN1                                                               ----------->RAV1(1)                                                              --------->ANAC46                                                              <---------ALFIN1                                                             --------->LBD16                                                            --------->ANAC58                <--------                                                            --------->ANAC58              <---------AHL20(2)                                                            --------->ANAC46           --------->AHL20(1)                                                         --------->ANAC46              <---------AHL20(1)                                                        ------>MYB83                 <---------TOE2(3)                                                        ------>MYB46(1)            <---------AHL20(2)                                                        -------->P             <---------YAB1                                                       <---------ALFIN1        <---------AHL20(2)             ----------->GT1                     --------->HSFB2a(1)           --------->AHL20(2)            ------------------------>ANAC81      <---------HSFB2a(1)          --------->AHL20(2)          --------->ATHB12      <---------------------WRI1 --------->ANAC46   <---------AHL20(2)  ----------->GT1        ---------->DOF2       --------->MYB52(1)--------->AtMYB61 --------->AHL20(2) --------->DAG2      <----------ID1        ---------->DOF2 <---------LBD16 --------->ARR11(3) --------->DOF2    ---------->DOF2     ------->TEIL    ------>ZmHOX2a(1)   <---------ARR11(3)   aaaaaagtttaaagattgagaaaaagaaaaagagaactatgaactcaaagaacggtcctaccccgcaccattccaaagattttaattaatatttttatca  4272000                  ------>ZmHOX2a(1)                ------>ZmHOX2a(2)                --------->HSFC1(2)                <---------HSFC1(2)               <------ZmHOX2a(2)              <---------ARR14(2)              --------->ARR11(3)              <---------ARR11(3)              --------->ARR14(2)         <-----------GT1       <---------ANAC58            <----------DOF2                --------->bZIP60(1)               <       <---------ANAC58       <-----------GT1          ------>ZmHOX2a(1)                            <   <---------AHL20(2)      ----------->TBP        <----------DOF2 <---------bZIP60(1)        <------- ---GT1<---------ANAC46<----------DOF2 <-----------HVH21       *TSS               ---------->DOF2 <--   tctattttttcttgtagatccttctctttataaaacccttttgtcacctcttctttcctcataacatcacatcatagcctaaaccaaagaaaacccttat  4272100                                                          --------->GLK1(1)                                                         --------->ARR14(2)                                                         <---------ARR14(2)                                --------->ZAT2           <---------GLK1(2)       <---------ALFIN1         <---------ZAT2     <---------ZAT14   <------ZmHOX2a(2)           --------->ANAC58    --------->ZAT14  --------->ARR14(2)           --------->ANAC58  --------->ANAC58     --------->TOE2(3)  <---------ARR14(2)      --------->ANAC58       --------->ANAC46    --------->YAB1 ---------ANAC58          ------>MYB83           --------->ANAC58    <---------ICU4 ---------ANAC58          --------->ANAC46     <-----------GT1      <---------YAB1 --MYB52(1)               --------->ANAC58   <-----------HVH21    --------->YAB1               <----- ---------GT1             ------>MYB46(1)  ------>ZmHOX2a(1)     <---------ATHB12     --------->TOE2(3)   ttgcgatccccacttgttgttcatcaccaagccaagctccatgtcctagtcactccacagattccctatcatcatcaattcgtttcaaacttagttcctt  4272200                                                               <---------ANAC58                                                               <---------ANAC55(2)                                                               <---------ANAC58                                                               --------->ANAC55(2)                                                         <---------ANAC55(2)                       <-                        <---------ALFIN1          <---------ANAC46      <-------TEIL               <-                      --------->ANAC58            <---------ANAC58  --------------->AtSPL8      -----                      <---------ALFIN1            <---------ANAC58  <---------------AtSPL8    -------                      --------->ANAC46    <---------ANAC58     <---------ANAC55(1)         --------->ALFIN1     <---------------AtSPL8               <---------ANAC58    <-------TEIL              --------->DAG2     --------------->AtSPL8   <---------YAB1--------->ALFIN1--------->ARR14(2)         ---------->DOF2 -----DOF2            --------->ANAC58    <---------ANAC46  <---------ARR14(2)<----------DOF2 <------   tcaaagtcttgtacatatatacacacacacctattattctcttggtgtgtttgtgtgttacatatacgtgtgagtacatactttgttgtaaaagtggatc  4272300                                            <------NtERF2                                            <---------At4g35610                                            <-------GAMYB                                           <---------MYB46(3)                                          <---------ANAC46                                         <---------At4g35610                                         --------->ATERF1(1)                                         <---------LBD16                                         <------NtERF2                                        <---------RAP2.6(1)                                        <---------ATERF1(1)                                        <---------RAP2.3(1)                                        ------>NtERF2                                        <---------RRTF1(1)                                        <---------ORA47(2)                                        <---------ERF1                                       <---------RAP2.3(3)                                       <---------RRTF1(2)                                       <---------RRTF1(3)                                       --------->ALFIN1                                       <---------ANAC46                                       <---------RAP2.6(2)                                       <---------RAP2.3(2)                                       --------->ATERF1(2)                                       --------->DEAR3(1)                                       <---------DEAR3(1)                                       <---------ATERF1(2)                                      <------NtERF2                                      <---------ABI4(1)                                      --------->DREB2C(1)                                      --------->ATERF1(1)                                      --------->RAP2.3(1)                                      --------->DEAR4(2)                                      --------->At4g35610                                     <---------RRTF1(1)                                     <---------RAP2.6(1)                                     <---------ATERF1(1)                                     <---------ORA47(2)                                     ------>NtERF2                                     <---------ERF1                                     <---------DEAR4(2)                                    <---------DEAR3(1)                                    <---------RRTF1(3)                                    <---------ATERF1(2)                                    --------->ATERF1(2)                                    <---------RAP2.3(3)                                    <---------RAP2.3(2)                                   <---------ABI4(1)                            ------>NtERF2                                   --------->ATERF1(1)                         --------->DEAR3(1)                                   <---------LBD16                             --------->DREB2C(2)                             --------->HSFC1(2)  <---------YAB1                --------->ANAC46                             <---------HSFC1(2)--------->YAB1                 --------->MYB46(3)                         --------->LBD16<---------DEAR4(2)                   <---------At5g28300       ---------->DOF2 <---------LBD16<---------At4g35610                  ----------->HVH21       <- --------TOE2(2)     <---------ALFIN1<---------RAP2.3(1)                  <-----------HVH21        <- --------TOE1(2)  <---------TCP20<---------DEAR3(1)                      --------->bZIP60(1)       -- ->ZmHOX2a(2)     <---------TCP16(1)<---------RAP2.6(2)                  <---------bZIP60(1)       -- -->ARR14(2)      <---------ARR14(2)<---------RRTF1(2)                   <---------TGA2(1)  --------- ---ARR14(2)      --------->ARR14(2)--------->DEAR3(1)                   --------->TGA2(1)  <--------   ggaggtatggaaagggaccggttccaccggaaacatcggcggcggcggatgataattcgtcttggaacgagactgatgtcaccgccatggtctccgctct  4272400                             --------->DEAR3(1)                            <------NtERF2                                                        <---                           --------->MYB52(1)                                                    ----                           ------>NtERF2                                                        <----                           --------->LBD16                                                    <------                          --------->DEAR3(1)                                                  -------                          --------->ANAC46                                                    -------                         --------->MYB46(3)                                                <--------HAHB4    <-----------HVH21  <---------ARR14(2)                                                  <--------ATHB1 <---------ANAC58      --------->ARR14(2)                                                  --------->ATHB51 <---------ANAC58<---------ETT(1)                                                          <---------ICU4 --------ZAT2    --------->ANAC46                                                         --------->AHL20(2) --------At4g35610<-----------HVH21      <---------ARR11(3)                               <---------ATHB12 ------->ZAT2 --------->GLK1(2)<-----------HVH21                  -------->P----------->GT1--------->YAB1 ------->At4g35610----------->RAV1(1)    --------->ARR11(3)      --------->WOX13(1)       --------->ICU4 >At4g35610   --------->ARR14(2) <---------WRKY12             --------->TOE2(3)           <---------ATHB51 -At4g35610   <---------ARR14(2)--------->WRKY18(1)      <------ZmHOX2a(2) <---------TOE2(3) <-------   cagccgtgtcatagagaatccgacagacccgccggtcaaacaagagcttgataaatcggatcaacatcaaccagaccaaggtaactaatacaataattat  4272500     --------->YAB1                                 --------->YAB1 ------ARR11(3)                                    <---------YAB1 ----->ARR11(3)                                  --------->YAB1 -----CCA1(2)   <----------DOF2             <----------DOF2                                  <------- ---AHL20(2)  --------->At4g35610        <-----------GT1                             --------->YAB1 -->AHL20(2)  <---------At4g35610        ------->TEIL                              <---------YAB1 -->YAB1 ----------->HVH21            <---------REM1(1)                ---------->DOF2  <-----------GT1 --YAB1--------->At4g35610           <---------TOE2(3)         --------->ANAC46 <---------YAB1   ----   atcttgatcatatgacagcttaattgtttttagctagttgatgtaactttgttataataagttacacactaactaaagacttactattaataaccctttg  4272600  Previous    Next  AGI:  At5g13330.1    Description:  RAP2.6L (related to AP2 6L); DNA binding / transcription factor. Identical to Ethylene-responsive transcription factor ERF113 (ERF113) [Arabidopsis Thaliana] (GB:Q9LYU3); similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT5G07310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68696.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 4272063    to: 4274663    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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