Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              ---------->DOF2                                                                          --------->LBD16                                                                         <---------HSFB2a(2)                                                                         --------->HSFB2a(2)                                                                       ------>ZmHOX2a(1)                                                                     ------>ZmHOX2a(2)                                                                   <---------GLK1(2)                                                                   --------->AGP1                                                                   <---------ARR14(2)                                                                   --------->ARR11(3)                                            --------->ARR11(3)     --------->ARR14(2)                                  <---------ZAT14          --------->At4g35610                                  --------->ZAT18          <---------At4g35610                -------                 <-----------GT1  <---------ZAT18   --------->ATHB12<------ZmHOX2a(2)        <-------            ----------->GT1       --------->ZAT14  <---------YAB1  <---------ARR11(3)        --------      ---------->DOF2        <--------P     <---------ARR11(3)   ----------->ARR10           <-------   ctcaaaaaaaaagaaggtttaacctgtctaggttagtgtactccaagaacttcatgatagcagcggctagatcctccagaaagatgcgataaacaatgat  4227200                                                          --------->At4g35610                                                          <---------At4g35610                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                     <-----------ARR10                                                     <---------AGP1                                                     --------->AGP1                                                     --------->ARR11(3) --------->TOE2(2)                                   <---------ARR11(3) --------->TOE1(2)                                   <---------ARR14(2) --------->TOE2(3)                             <---------YAB1 -->YAB1                        <---------At4g35610  --------->ARR14(2)                      <------- --YAB1                         --------->At4g35610 <---------CCA1(2)       ----------->GT1  <------- ->ICU4              ----------->GT1         --------->YAB1         <---------TOE2(3)        -------- --ATHB12          <---------At4g35610       <---------ICU4        ---------->DOF2           --------   aaacctaagaattttagacagagcagataatttcagcttatgcaaaattatcacagatctagctgaaactaaagtttgaagttaaacaagtccaaaatct  4227300         --------->ATHB12         --------->ATHB51        --------->ICU4        <---------YAB1 --ARR14(2)                 --------->YAB1          ------->TEIL                                 ---- --ARR11(3)                 <---------ICU4       <---------ATHB12                                <--- ->ARR14(2)                <---------YAB1      ------>MYB83           --------->TOE2(3)          ---- ->GLK1(2)       <---------ARR14(2)            ------>MYB46(1)        --------->TOE1(3) ----------->GT1   gtataagagcataattgaagaaccagaccataataacatgaagaacaccaaatgaatgcctcgatttcgaaaccctaaattcaactaaaaatgtaaaata  4227400                --------->ARR11(3)        ----------->GT1      ---------->DOF2    --------->ANAC58    --------->ANAC58  --------->ANAC58                                     ------->GAMYB  --------->ANAC58    <---------GLK1(2)             --------->MYB52(1)     --------->At5g28300 ----->ANAC46  --------->AHL20(2)              --------->CCA1(2)          ----------->GT1 ------ANAC55(2)<---------AHL20(1)            --------->ARR14(2)       --------->MYB52(1) ----->ANAC55(2)--------->AHL20(1)            <---------ARR11(3)    --------->YAB1   cgagacgcgaaagtgaaatatatagactctcgactacaaaaaaaaccagatatataaccgaaaatttgaataaaaacggtaatagaattggaattcgaaa  4227500                                                               ----------->GT1                                                               <---------ANAC58                                                <---------MYB46(3)                                               <---------AtMYB61                                          --------->MYB52(1)   <---------ANAC46            <---------                                   --------->TOE1(3)           <---------ANAC58            ==========          <---------ANAC58         --------->TOE2(3)          <-----------------------TaNAC69(2)          <---------ANAC58        <---------ANAC55(2)       --------->DAG2             ---------->ID1       <---------WOX13(1)         ----------->RAV1(2)     ---------->DOF2             <-----------GT1   taccctgtaattgctagacactagagagaaacgattacctgaaaaaacgatggtggaaggaaaaggcgtaaattgctccgcttgtgtttttctctttcta  4227600                          --------->HSFB2a(1)                   ------->MYC2                   <-------MYC2                   <-------PIF5                   ------->PIF5                   ------->MYC4                   ------->MYC3                   <-------MYC4                   ------->PIF4                   <-------MYC3                   <-------PIF4                   --------->TOE1(2)                  --------->O2                  <---------TGA1a ---------->TaMYB80                  <---------O2 <---------ANAC55(2)                  <---------PIF3(3)                  =================bZIP_DOF                  =================bZIP_DOF                  --------->TGA1a --------->ARR14(2)                  --------->PIF3(3)                 <---------TOE1(2)<---------ARR14(2)                <---------ALFIN1--------->LBD16                <------------OsbHLH66                                  --------->YAB1                *TSS    ---------->DOF2                                <---------ICU4              <----------------PIF3(2)       --------->ETT(2)     ------------>CBF            ------>ZmHOX2a(2)  <---------ANAC55(1)               --------->TOE2(3)           <------ZmHOX2a(2)   <---------ANAC46                ------->TEIL           <---------GLK1(1)  <-------TEIL<---------ANAC46<---------At4g35610                  <-----           --------->GLK1(1)  ------>ZmHOX2a(2)           ----------->RAV1(2)                  ------          <---------ARR11(3) <------ZmHOX2a(2)            --------->At4g35610                 -------          <---------ARR14(3) --------->CCA1(2)           --------->GLK1(2)           <---------ANAC58          --------->ARR14(3)--------->ARR14(2)         --------->HSFC1(2)            <---------ANAC58          --------->ARR11(3)<---------ARR14(2)         --------->HSFB2a(1)      <---------ANAC58          --------->ARR14(2)--------->ARR11(3)    --------->At4g35610 --------->ICU4 <---------ANAC46          <---------ARR14(2)<---------ARR11(3)    <---------At4g35610 <---------ATHB12 <---------MYB52(1) -DOF2  ----------->ARR10 ----------->ARR10  --------->ZAT18  <---------GLK1(2) <---------ANAC58 ===========================bZIP_DOF    <----------DOF2<---------HSFC1(2)       <---------ANAC46   ttacgaggctaagatctcccacgtgcgaaagatccgtatatgctttgtggacagcgaagcatctgaatctcaatgatgaactgcgtgccgtttccatgat  4227700                         <---------MYB52(1)                         --------->DOF5.7(2)                                                       --                        <-------GAMYB                                                              <-                       ----------->GT1                                                             <-           <-----------------AGL3--------------->AGL15                                             --           =======================================MADS_MADS                                       ---         <---------RAP2.6(3)     <---------------AGL15                                            <-- ----ARR11(3)      --------->MYB59                                                            ------- --->ARR11(3)   <------------CBF----------------->AG         ----------->GT1 ---------->DOF2--------- -->YAB1 <---------SPL7<---------MYB46(3)                    <---------ANAC55(2)            ---------   attacatgggccgtctgaaattgggtcgttaatttccaaaatttgtatttctttgaaccgattcagtaacaaaacttggtaaagagtttctcccaagaaa  4227800      <---------MYB52(1)    ----------->GT1   <-------TEIL                                                                            --------->RAP2.6(3) ------->AHL20(2)                                                                         --------->ATHB12 --------AHL20(2)            --------->ANAC58                 --------->ATHB12         --------->ANAC55(2) --------AHL20(1)            --------->ANAC58               <---------WOX13(1)   <------NtERF2 ------->AHL20(1)            --------->ANAC46            --------->AHL20(1)    --------->ANAC58 ------>AHL20(2)     ----------->GT1                     --------->AHL20(2)    --------->ANAC46 -------AHL20(2)     <------MYB46(1)                    --------->AHL20(2)     --------->ANAC58 -->AHL20(2)         <------MYB83               --------->TOE2(2)             --------->SPL7 >ANAC58             <---------ANAC55(2) <---------ANAC46<---------AHL20(2)   --------->RAP2.6(3)<--- >ANAC58            --------->MYB59<-------TEIL --------->TOE1(2)  <-----------GT1     <---------ANAC55(2)   ataaattcgttatattgttagataggtaaacacgagattcatgttgtataccttcgaaattaattgatttatccaaactggacggcattacatgatggcc  4227900                    --------->ANAC55(2)                   <---------TOE2(3)                   <---------TOE1(3)                  <---------DOF5.7(2)                --------->DOF5.7(2)               --------->TOE1(3)               --------->TOE2(3)              --------->ANAC46              --------->ANAC58           <---------DAG2              --------->ANAC58      --------->YAB1         <---------PCF5          --------->YAB1    <---------GLK1(2)                           <-----       --------->ALFIN1          --------->TOE2(3) <---------ARR11(3)            --------->ATHB12   <-----------RAV1(2)    --------->YAB1 <----------DOF2                        <---------ATHB12 ---NtERF2  <---------ALFIN1     --------->TOE1(3) --------->ARR11(3)<-----------GT1           ------   tcaattcaggtggaccacgttaacgtattaataaaccataatactttttgtaagattttcttattttgttttcacttatcaaatcagtggcattgatttt  4228000                                       <---------ANAC58   --------->ARR11(3)                                       <---------ANAC58   <---------ARR11(3)                                      --------------->AtSPL3          --------->ATHB12            --------------->AtSPL8 <---------ANAC46                    <-----------GT1    ----------->ARR10 <-----------RAV1(1)           <------MYB46(1)      ------>MYB83                 ---------->DOF2 ----AHL20(2)                  <------MYB83         ------>MYB46(1)   ----------->GT1 --->AHL20(2)                 --------->MYB59     <---------MYB59  ---------->DOF2    --------->CCA1(2)   attttgtgggtttgatttgaatgttatggcattaggttttttcgtacttaaacctacttagatattgtctaaaggtaaaacttcaaagacatgagcatga  4228100  Previous    Next  AGI:  At5g13240.1    Description:  transcription regulator. similar to unnamed protein product [Vitis vinifera] (GB:CAO42239.1); contains InterPro domain Maf1 regulator (InterPro:IPR015257); contains InterPro domain RNA polymerase III transcriptional repressor, MAF1; (InterPro:IPR017152) Range:  from: 4225008    to: 4227616    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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