Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------AHL20(2)  ----------->GT1                           <---------TOE2(3) --------RAV1(2)                      --------->ICU4                                <---------YAB1 -----ATHB12                     ----------->GT1                                 --------->ICU4 -->WOX13(1)                    <---------TOE2(3)                            <------ZmHOX2a(1) -ZAT18 --------->AHL20(2)      <---------TOE1(3)                ---------->DOF2 --------->GLK1(2)  -   cagggggaaaattaatccacttgtacaataggtgaaggtaaaaattaagttttgactgagagaaccaaaaagacttataggagattatgagttcaagtgt  4176200                                                                                            ---------                                                              --------->YAB1                <--------                                                         <---------YAB1                   <---------AHL20(2)              --------->AHL20(2)                    <------MYB46(1)                   ---------------            <----------DOF2--------->At5g28300      <------MYB83                      <--------------      --------->YAB1      ----------->GT1           ----------->GT1                  ----------------     <---------YAB1 <-----------GT1                --------->MYB46(2)                ---------------- -------->ZAT6<---------AHL20(2)                   <---------MYB46(3)                <---------------   caacactatcatcactttaattttacaagggtaaatgagtttaaaacaattgtttggtgattaatgacaacatttctatgaccaaaaactatttatagaa  4176300                  <---------AHL20(2)                  --------->AHL20(2)                --------->AHL20(2) >HSFB2a(2)     <---------AHL20(2)                                                      ----------->GT1 -HSFB2a(2)   --------->AHL20(2)                                                --------->AHL20(2) >AGL15      --------->AHL20(1)                                           ----------->GT1 -AGL15      <---------AHL20(1)                                          --------->DAG2 --------->ANAC55(2) ->AGL3     --------->AHL20(2)             ---------->DOF2              ---------->DOF2 <---------ANAC55(2) ->AGL2   --------->AHL20(2)    --------->DAG2                    <---------AHL20(2)--------->YAB1 --AGL3 --------->AHL20(2)     ---------->DOF2               <---------YAB1  ----------->GT1 --------   attcaaaaaaaaaaatatatatatatactctcaaaaagttttataaaaagaaactgaagaaatatgattttatgtaaagtgattaaaaataagtaataag  4176400                                     --------->ARR14(2)                                             -                                     <---------ARR14(2)                                          <---                                     <---------ARR11(3)                              <---------ANAC58                                   ----------->ARR10                                 <---------ANAC58                          --------->At4g35610                <----------ID1   <---------AHL20(2) ----                          <---------At4g35610 <---------ANAC58        ---------->DOF2<---------ANAC46    <-----------GT1   >>>>>>>>>WRKY18--------->ARR11(3)    ---------->DOF2 ----------->GT1<---------- ->ICU4--------------->AGL15  ---------->DOF2 <---------ANAC58   ---------->DOF2     <---------AtLEC2   ttttttttactaattttgttattttgacagcagaaagaagatttgtttgcttaaattaacaaaaagaaaaagaaaagaagttaatttgcttgtattgaag  4176500        <---------DOF5.7(2)                                   --------->TOE2(3)       <---------WRKY12                                     --------->ICU4       <---------WRKY38(1)                                 <------------CBF         <---------ANAC46       <---------WRKY45                                 <-----------HVH21           <---------ZAT6     <-----------HVH21                                  <-----------TGA1          *TSS              - -------->GLK1(2)                                      --------->ANAC46  <------------CBF           - ------ARR11(3)                                  <---------At4g35610  ------------>CBF              < ----->ARR11(3)---------->DOF2                   --------->At4g35610 --------->ANAC58              -- --CBF--------->DOF5.7(2)      <------ZmHOX2a(1)--------->ANAC46     --------->ANAC58     --------->ZAT6   ataatctcgtcaacgagaaaagtttcgaaggaaggatttactgagagtttcagcaacgcgtcattgttaattcgcaattggtaatagtgtgaacactcgt  4176600           <---------HSFC1(2)           <---------At4g35610           --------->At4g35610                                                                  <----           --------->HSFC1(2)                                                                   <----          --------->GLK1(2)                                                                     <----     ---------->DOF2                                                             --------->GLK1(2) ----------->RAV1(1)                                                             <---------ARR14(2) -------->ANAC58                                                                 ------->TEIL  ------ -------->ANAC58                      ------>ZmHOX2a(1)                          <-----------ARR10 ----------ID1         <---------CCA1(2)                                         --------->ARR14(2) ------->SPL7          <---------At4g35610 <----------DOF2           <-----------GT1     ---------->DOF2   ggacgacaaaagaagctgcttcttcatctctctctctctccttctctttctctctcaactccaattcgtttttaccagtttcgaatctgaacaaagttgg  4176700      <---------------AtSPL8   --------->ATHB12  <---------AHL20(2)      <-----------GT1  <---------YAB1   --------->TOE2(3) --MYB46(1)      --------->GLK1(2)                             <----------DOF2                 <----- --MYB83        <---------GLK1(2)<----------DOF2    ---------->DOF2                      ------>ZmHOX2a(1) -----ANAC46    --------->ARR14(2)       --------->HSFB2a(2)  <---------DAG2      <---------ATHB12 --->MYB59   --------->ANAC46 ------>ZmHOX2a(1)   <------ZmHOX2a(1)         <-----------GT1  --------   gttttttattggtacccagaatctcaattctccttctttccttctgggtataggaaaagtctcgcctttttttatatttatccaatcgctcctgttcatt  4176800           >>>>>>>>>ARR2           >>>>>>>>>ARR1                                          <---------ANAC46                 --           >>>>>>>>>ARR2                                   <---------MYB46(3)                      <-           >>>>>>>>>ARR1                                 <---------ANAC58                     -------   --------->LBD16                                       <---------ANAC58                     <------ ----WOX13(1)             --------->ATHB12 ---------->DOF2<--------P                 ----------->TGA1 ->ATHB12 <------ZmHOX2a(1)    ----------->GT1    <------ZmHOX2a(1)      <---------YAB1      --------   gattccccagtaggattgtagtttttggttattgggaaaattgagtaaaggaggagatgggttgtttctcgtgttttgattcgagtgatgacgagaagct  4176900                                             ----------->RAV1(1)                                            ----------->HVH21                                            ------->GAMYB                                            --------->DREB2C(2)                           --------->At4g35610     --------->ARR14(2)    <---------At4g35610<-----------HVH21    --------->At1g77200--------->ARR11(3) ------->ARR14(2)  --------->YAB1          --------->DEAR3(2)  <---------ARR14(2)        <-----------GT1 --------ARR14(2)  <---------ICU4          --------->MYB46(3)  --------->ARR14(2)      <---------WOX13(1) -->At4g35610     --------->ICU4      --------->YAB1          <---------CCA1(2)     <---------YAB1 ---At4g35610     <---------ATHB12 --------->WOX13(1)     --------->AHL20(2)  <---------TOE1(3) ->GLK1(2)  ------->TEIL   <---------At4g35610     <---------ARR14(2)        <-----------RAV1(2)   --   gaatccagttgatgaatctaatcatggtcagaagaaacaatcacaaccgacagtatccaataacatatctggactcccttcaggttttgatttactcatt  4177000                                            ======================HOX2a_HOX2a                                            ------>ZmHOX2a(2)                                           =======================HOX2a_HOX2a                                           <------ZmHOX2a(2)                                           --------->CCA1(2)                                           --------->ARR14(1)                                          <---------ARR14(3)                                          --------->AGP1   ------>ZmHOX2a(1)                                          --------->ARR14(2)                                          <---------ARR14(2)                                       <-                                          --------->ARR11(3)           --------->MYB52(1)      <-----                                          <---------ARR11(3)        --------->At4g35610  <---------ATHB12                           <---------MYB52(1) ----------->GT1       <---------At4g35610--------->WOX13(1)  <---------DAG2         <---------ANAC58 <---------AGP1   ================================HOX2a_HOX2a  <----------DOF2        <---------ANAC58 --------->ARR14(3)       <---------TOE1(3)------>ZmHOX2a(2) -------->ID1         <----------DOF2   ----------->ARR10------>ZmHOX2a(2)        <---------ARR11(3)   tgtgcttttttatgttttaatccactttcgttacatgctcataagatctggttatttgatcctctggttaagctaacgggacttgatctcaatcactgtt  4177100  Previous    Next  AGI:  At5g13160.1    Description:  PBS1 (AVRPPHB SUSCEPTIBLE 1); kinase. Identical to Serine/threonine-protein kinase PBS1 (PBS1) [Arabidopsis Thaliana] (GB:Q9FE20); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G18610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70083.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 4176582    to: 4179888    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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