Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           ------>ZmHOX2a(2)                                                                        <------ZmHOX2a(2)                                                                       <---------AGP1                                                                       --------->AGP1          ------                                                                       --------->ARR11(3)      <-----                                                              <---------AHL20(2)             <-------                                                             --------->ARR11(3)             ---------                                 <-----------GT1             --------->AHL20(1)            <---------ICU4                            --------->AHL20(2)               <---------ARR11(3)      --------->ANAC55(2) ---------YAB1              <---------AHL20(2)               <---------AHL20(1)      <---------ANAC55(2) ---->TOE2(3)               <---------AHL20(1)    <---------AHL20(2)   <---------ARR11(3)  <--------HAHB4 --->ANAC55(2)              --------->AHL20(1)   --------->AHL20(2)    <---------ARR14(2) <---------YAB1 ----ANAC55(2)           --------->YAB1          <---------AHL20(2)   <---------CCA1(2)   --------->ICU4   ttatcatctagtttatatgaattctattaataaattaacaaaacatggaaattttttttttgatatatttgtagatctatattgaatatgtgatcattaa  4142600                                                                                 <---------AHL20(1)                                                                                 --------->AHL20(2)                                                                                 --------->AHL20(1)                                                                                 <---------AHL20(2)     <---------GLK1(1)                                                           --------->ARR11(3)     --------->CCA1(2)                                                           <---------ARR11(3)     --------->RVE1(1)                                                          --------->AHL20(2)     --------->GLK1(1)                                                   <---------HSFB2a(2)    --------->ARR11(3)                                                   --------->HSFB2a(2)    --------->ARR14(2)                      <---------AHL20(2)      <---------AHL20(2)    <---------ARR11(3)                   ----------->GT1         <---------AHL20(2) --->AHL20(2)                           --------->DAG2           --------->AHL20(1) ----AHL20(2)                          ---------->DOF2           <---------AHL20(1)   --------->AHL20(2) --YAB1                             --------->AHL20(2)          --------->AHL20(2)    <---------AHL20(2) >TOE2(3)                    <---------AtLEC2         ---------->DOF2 <---------AHL20(2)            <   aatcaagatatcccaatccaaaacaatttttggatgaattaaaaagttaattatccaaaagttagattatattttttagaaaatatattaaaatttgtgc  4142700                       <---------AHL20(2)                                                        <---                       --------->AHL20(2)                                                        ----                  <---------AHL20(2)                                                            <----                 <---------AHL20(2)                                         <---------ZAT6   --------                 --------->AHL20(2)                                     <---------YAB1       --------                 <---------AHL20(1)                                  <---------AHL20(2)      <-------              --------->YAB1                        <---------YAB1   <---------YAB1         ---------      <---------ARR11(3)                          <---------AHL20(2) --------->AHL20(2)     <--------      <---------AHL20(1)      <-----------GT1    <---------YAB1   <----------DOF2    --------->YAB1      --------->AHL20(1)<---------AHL20(2)  <------ZmHOX2a(1)    <---------DAG2 <---------AHL20(2) ------ZmHOX2a(1)--------->AHL20(1)    --------->ALFIN1       <-----------GT1  <----------DOF2  -----   taggacaatatatcaaaaataaaattttaatttcaccatatgtgtaggatttttatttttagtttagcctttttattagtgttttaatgagaaaataatt  4142800     <----------DOF2  --------->GLK1(2)  <---------ARR11(3)  --------->ARR11(3) --------->RVE1(1) ------AHL20(2) ----->AHL20(2) -----AHL20(2) ->AHL20(1)                                  <---------AHL20(2) ->AHL20(2)                                  --------->AHL20(2)          >>>>>>>>>SARD1 --AHL20(2)                                  --------->AHL20(1)          >>>>>>>>>CBP60g >AHL20(2)                                --------->YAB1            ----------->GT1 -AHL20(2)                 --------->AHL20(2)<---------AHL20(1)    ----------->GT1 ---->AHL20(2)   --------->YAB1         --------->AHL20(2)       <------ZmHOX2a(1)   taaaaatctttttgaccaaaaataacaaaaaaaatggaagaaaataataaattccctctgagtggaaggagggaaatttggctcccaaatgaaaaactaa  4142900                     <----------DOF2               --------->ARR14(2)           >>>>>>>>>E2Fc           >>>>>>>>>E2Fd                                       --------->GLK1(2)          ------>NtERF2                                    --------->YAB1                          --          --------->LBD16                                 <---------YAB1                    <--------         --------->ANAC46       ---------->DOF2        ------>ZmHOX2a(1)              --------->At4g35610         --------->ANAC58    --------->YAB1          ----------->RAV1(2)         <---------ABI4(2) <-         --------->ANAC58   <---------YAB1       <---------ALFIN1--------->TOE2(3)   --------->DEAR3(1)        <---------LBD16<---------AtMYB61        --------->ZAT14*TSS           ---------->DOF2     ---   atttcaaaaccccgccaaataggctttggtattataaagaaaacgctctctccactcctgatgataatctcaaaatcgttcaaagcaccgctcaaattct  4143000                                                                                  --------->RRTF1(2)                                                                                  --------->DREB2C(2)                                                                                  --------->RAP2.3(3)                                                                  <---------ZAT18 --------->RAP2.3(2)                   --------->LBD16                               <---------MYB52(2) <------NtERF2                  --------->DEAR3(1)                            --------->At4g35610----------->RAV1(1)                  <---------DEAR3(1) ------>NtERF2              <---------At4g35610------>NtERF2                 <------NtERF2       --------->LBD16           ------>NtERF2      --------->ANAC46                 <---------LBD16    --------->ANAC46          --------->DEAR3(1)  --------->DEAR3(1)                 --------->ATERF1(1)--------->ANAC58         --------->ATERF1(1)  <---------ATERF1(2)                <---------RAP2.3(1) --------->ANAC58------>MYB83<------NtERF2     --------->ATERF1(2)    <---------ARR11(3)              ------->GAMYB   ------>MYB46(1)              --------->RAP2.3(1)    --------->ARR11(3)             --------->MYB46(3)      ------->GAMYB         --------->ERF1    <---------ARR14(2)             --------->SPL7 --------->AtMYB61             <---------ATERF1(1)    --------->ARR14(2)  --------->GLK1(1) <---------ATHB12--------->MYB46(3)   <---------DEAR3(1)   <---------CCA1(2)    <---------bZIP60(1)      <---------HSFB2a(1)      --------->ANAC46 ------->LBD16 <---------DEAR3(1) ------>MYB83   --------->MYB46(3)       --------->ANAC58 -GLK1(2)     <---------ZAT14     ------>MYB46(1)--------->HSFB2a(1)      --------->ANAC58 ----------HVH21------>NtERF2   --------->AtMYB61--------->HSFC1(2)       --------->ANAC55(1) ------- ------>ANAC46--------->ZAT18  --------->MYB46(3)<---------HSFC1(2)     <---------ALFIN1<---------GLK1(2)   ccgtcaaatcttctactgcgccggtgatatcaaaccatccgccaatggagaaccatcccaagcgccagcgaacaacacgcctcgccgccagaaacttgaa  4143100                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                             <-------                                                                                             <------NtERF2                                                                                            <--------                                                                                            <--------                                                                                            ------>NtERF2                                                                                            <--------                                                                                           --------->ANAC46                                                                                     --------->ARR14(2)                                      --------->ANAC58                   ------>ZmHOX2a(2) <---------ATERF1(2)              <---------ZAT14         --------->ANAC46                  <------ZmHOX2a(2)  --------->RAP2.6(2)              --------->ZAT14         --------->ANAC58                 <---------ARR11(3)  --------->DEAR3(1)        <-----------HVH21         <-----------TGA1             ------->TEIL     <------NtERF2-------- <---------ARR14(2)               <-----------HVH21         <---------MYB52(2)<---------DEAR3(1)<---- --------->ARR14(2)              --------->YAB1          <----------ID1<---------AGP1<---------ARR14(2) --->DOF2 --------->YAB1        <---------ATHB12  --------->ARR11(3)   --------->ARR11(3)  --------->RAP2.3(3)   gcgaaaactcagtcacaacacagatggagcgccaatcgtcacacaacttattgatattgacgacgaacccatagatctcgtcgtcgcgattcgccgtcac  4143200                                                               <---------At4g35610                             <---------YAB1                 <---------At4g35610                             ------>ZmHOX2a(1)           <---------HSFC1(2)                           ------>ZmHOX2a(2)             --------->At4g35610     <-------TEIL         <------ZmHOX2a(2)              --------->HSFC1(2) -----TGA1a              <---------ARR14(2)     <-----------HVH21 -----ANAC46             --------->AGP1      <---------ZAT2 --------->At4g35610 ---->TGA1a              <---------GLK1(2)   --------->At4g35610                                  --- ---->O2                 <---------ARR11(3)  --------->ZAT2<-----------RAV1(1)                 <----- --MYB52(1)              --------->ARR11(3)  <---------At4g35610                               <----- ---TGA1                 --------->ARR14(2) ------->TEIL--------->GLK1(2)                     ------- ---HVH21               <---------At4g35610 --------->GLK1(2)  --------->At4g35610           -------- -RAP2.6(3)      <---------GLK1(2)       --------->ANAC46<---------At4g35610--------->ARR14(2)------- --->HVH21      <---------ZAT2          <---------------------WRI1          <---------ARR14(2)<------ -----O2        <---------At4g35610<---------YAB1  ---------->DOF2  --------->GLK1(1)    <-----------   gtcgaggttcttaactccagcttctcagatcctgattttgatcacgaagctgtcaaagaagctgctgctgatatcgccgatttggctaaaatcggtaccg  4143300                         <------NtERF2                         <---------At4g35610                        ------>NtERF2                        <---------ATERF1(1) ------>SPL7            <---------MYB46(3) ----ANAC58             <---------ERF1 ----ANAC58            <---------RAP2.3(2)              <----------DOF2 -------->AtSPL3       <---------RAP2.6(2)             <---------ANAC58 ->SPL7   <-----------GT1--------->At4g35610       <----------DOF2 -------->AtSPL8       <---------DEAR3(1)   <-----------GT1       ------>ZmHOX2a(1) ---------AtSPL3      <---------LBD16   <-------MYC3   <---------ANAC46                           --- ----AtSPL3  --------->ZAT6             ------->MYC3   <---------ANAC58                      <-------   tacttcttcattttacctctaatcggcggctaaaactgaaaacgtgttactctctttgcttgttcgtccttgagttgctcaattttgagtcaattctcga  4143400          <-----------------AGL3        --------->ZAT6   <---------GLK1(2)   <---------ARR14(2)                                                             <---------HSFB2a(2)   --------->ARR14(2)                                     <----------DOF2         --------->HSFB2a(2) ------>MYB52(1)                            <---------ANAC58            --------->DAG2 --HSFB2a(2)        <---------GLK1(2)       <---------ANAC58           ---------->DOF2              -   caacggattcactctaattttggattctacatagaaattgttttgttcttgcccatagtactttgattttcagtaaggcgagacctagaagtgttttttt  4143500  Previous    Next  AGI:  At5g13060.1    Description:  armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein. similar to armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G19330.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75981.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22522.1); similar to hypothetical protein OsI_019192 [Oryza sativa (indica cultivar-group)] (GB:EAY97959.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains Inte Range:  from: 4142963    to: 4147094    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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