Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->ANAC46                     --------->At4g35610                     <---------At4g35610                    --------->ANAC58                    --------->ANAC58               <---------TOE2(3)           --------->At4g35610                        <---------At4g35610     --------->CCA1(2)  --------->ANAC58              --------->At4g35610                           -    --------->ARR14(2)  --------->ANAC58        --------->TOE1(2)     --------->At4g35610          --    <---------ARR14(2) --------->ZAT18 --------->ATHB12               <---------At4g35610      ------ --->ATHB12<---------At4g35610      --------->ANAC55(2)    --------->HSFB2a(2)             <---------ATHB12   ttgagagatttgcagctaatgtaagcacacaatcccttacatgatttgaaccagggagcttcaagaacagtcttctgaattgcctcatctacaatcaagg  4138400                                                                                    --------->HSFB2a(1)                                                                                    <---------HSFB2a(1)                                                                                    <---------HSFC1(2)                                                                       <------MYB83 --------->HSFC1(2) --------->TOE1(2)                                                     <---------ANAC58        <----- --------->TOE2(2)                           <------ZmHOX2a(1)         <------MYB46(1)        <------ ---------->RAV1(2)                         <----------ID1             <---------ANAC58       <------ ------>P       <---------YAB1           ---------->DOF2      ------->TEIL<-------TEIL        <------ --->ANAC46<---------ZAT6            ---------->DOF2 ---------->DOF2  <---------MYB46(3)<-------TEIL   caacctgagattagtgttgttattgaaaacagaacaaaaaaaagaaaggacaaaaaaaagattgaaccttgttgggttcggagagaagggtccatggctt  4138500                          --------->ARR14(2)                   --------->At4g35610                   <---------At4g35610                  <---------ANAC46         --------->LBD16 <---------ALFIN1        <---------ANAC58--------->ANAC58        <---------ANAC46----------->HVH21        <---------ANAC58--------->ANAC58                                       <---------At4g35610       <---------LBD16  --------->ANAC46                                   <---------DEAR3(1)    --------->GLK1(1)<---------ZAT18                                       <---------AtMYB61    <---------GLK1(1)<---------SPL7                                     <-----------RAV1(1)   <---------ARR14(2)--------->ZAT18                                   <---------ANAC58   --------->ARR14(2)<---------ZAT14                                   <---------ANAC46 -----DOF2      <---------ZAT14                                        <---------ANAC58  <------NtERF2 ---ANAC46      --------->ZAT14                                      <-----------RAV1(1)------>NtERF2 ---ANAC58     --------->ALFIN1    <---------YAB1          ------>ZmHOX2a(1)<---------MYB46(3)     <- ---ANAC58------>NtERF2--------->SPL7                  --------->ARR14(2)  --------->ALFIN1   <------   ttagggatttgcggacagtggagcgcacgacccgcttctgcttgaaaatggaatcgagttcctcttggtttttgctggtggtgctcatggcgacgatggg  4138600                                           --------->HSFB2a(2)                                          <---------LBD16                                       ------>ZmHOX2a(2)                                      <------ZmHOX2a(2)                                     <---------ARR11(3)                                     <---------ARR14(2)                       <---------ANAC58                                     <---------ARR14(3)                       <---------ANAC46                                     --------->ARR11(3)                       <---------ANAC58                                     --------->ARR14(3)                       <---------bZIP60(2)       ----------->GT1               --------->ARR14(2)                    <-----------RAV1(1)     <---------ANAC58              <------NtERF2                         <---------ZAT18     <---------ANAC58            --------->ETT(1)               ------>ZmHOX2a(2)                   -     <---------ANAC46        <---------MYB46(3)           <------MYB83   <---------ZAT14            -    <---------At4g35610      <---------DEAR3(2)           <------MYB46(1)--------->ZAT14            <    --------->At4g35610     --------->ETT(1)          --------->ATHB12  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --------HSFB2a(2)        <-----------HVH21<---------HSFB2a(2)<---------ARR11(3)                    < ---MYB46(3)  --------->GLK1(2) --------->ALFIN1 >>>>>>>>>TBF1--------->ARR11(3)          ---------->DOF2   tctagtagctggtgataatctgaaaacgggtcgggtcgggatcttggggaagaagaagattggtgatcttcgtagtgctgtcgtggtgatacaaaagacg  4138700        <---------ICU4        <--------HAHB4        --------->ATHB12        --------->YAB1        -------->ATHB1       --------->ICU4       <---------ATHB12                                            <---------ICU4     --------->WOX13(1)              <---------------AGL15        --------->ICU4   <----------ID1 <-- -------->ZAT2                       <----------DOF2     --------->ZAT14     --------->TOE2(3)    --- -------->At4g35610                  --------------->AGL15        <---------ATHB51 --------->ANAC46 - ---------At4g35610               ---------->ID1         <---------ZAT14  --------->ANAC46      ----- ---------ZAT2         <---------MYB52(1)   ----------->GT1  ----------->GT1 --------->TOE1(3) *TSS -   cgagctccaatcattacaagttcccgttttttttttgttctttaagaagaaaaaaaaactgcagggaaattattccaaaccataaacgacaaaatgtgaa  4138800       ---------->DOF2                                                 --------->ARR11(3)  <---------WOX13(1)                                                   <---------AHL20(1) <------------CBF                                                      <---------ARR11(3) -------MYB59                                            --------->ALFIN1 ------>TOE2(3)           --------->YAB1      ----------->GT1         <-----------TBP ----->MYB83             <-------TEIL      <-----------RAV1(1)  --------->DAG2 -->TEIL   <------ZmHOX2a(1) --------->AHL20(2)     >>>>>>>>>>>>>>>>>LFY         --------->TOE2(3) ----->MYB46(1)   --------->YAB1          <---------TOE2(3)    ---------->DOF2 ------->TEIL<------ZmHOX2a(1)   cctaattgctaaaggattactaatagtttcataaaatgaagactaatgttgttaatccagtgtggaaaaggaatatatatgaacattagaacaggaattt  4138900                                 --------->ALFIN1                                 <-----------RAV1(1)                               <---------ANAC46                               <---------ANAC58     --------->YAB1                               <---------ANAC58    <---------ATHB12                             <---------ANAC46     --------->ANAC58                           <---------ZAT14        --------->ANAC58                           --------->ZAT14  --------->GLK1(1)            --------->ANAC58  --------->DAG2           --------->ZAT18<---------CCA1(2)              --------->ANAC58  <--------- ---------->DOF2  <---------ARR11(3)  <---------ANAC46      ----------->GT1         <---------GLK1(2)   agtaaaagtagcctaaacaatatcaatagtgtagtgtgtggctcatatatccaagcatgaaattgcaaaatgtgcaagcttcaaaagattgttctttctc  4139000                                                                                             <-------                                                                                            <--------                                                                                        <---------YAB1                                                                                        <---------AHL20(2)                                                                                     <---------ARR11(3)                                                                 ----------->GT1     <---------ARR14(2)                                                             --------->ICU4          --------->ARR14(2)                                                        ----------->GT1  --------->TOE2(3)  ---------                                   <---------ANAC58   ---------->DOF2<---------GLK1(1)  --------->AHL20(2) -DOF2   <-----------RAV1(1)       <---------ANAC58 <---------YAB1   --------->GLK1(1)--------->CCA1(2)   taaacatgaaattgttgctaagttgtatgagagcattgctagcctgaaatgaccatgaaagtaaaaatgggaaatccataaactgcagatataattaatc  4139100                                                              --------->ANAC55(2)                                                              --------->ANAC58                                                              --------->ANAC46                                                              <---------ANAC55(2)                                                              --------->ANAC58                                                         --------->ANAC58 --------->HSFC1(1)                           --------->ARR14(3) ------>ZmHOX2a(1)                            <---------ARR14(3)      <-------MYC3 <---------HSFC1(1)                           --------->ARR11(3)      ------->MYC3 --------->HSFB2a(2)                          <---------GLK1(2)       <-------MYC2 <---------HSFB2a(2)          ---------->DOF2 --------->ARR14(2)      ------->MYC4            ------- ----GT1         ------>ZmHOX2a(1)            <---------ARR11(3)      ------->MYC2   <---------YAB1 < -AHL20(2)      --------->TOE1(3) <---------ANAC58       --------->ANAC46<---------ANAC58 --------->YAB1 >AHL20(2)      --------->TOE2(3) <---------ANAC58       --------->ANAC58<---------ANAC58<-------TEIL   ttcctagaaaacatatttccttaacatatcaaaaaagcttgtgaacaagattttcttacaagtcacgaaacatgtgcttgccaaaatgtgattcataaaa  4139200                                                      --------->TOE1(3)                         <----                                                      --------->TOE2(3)                   <---------AHL20(2)                                          <---------TOE2(3)                              --------->AHL20(2)         ------>ZmHOX2a(1)    --------->ANAC55(2)   -------->P                   <---------MYB46(3) <  --------->ANAC46            --------->ANAC58      ------>MYB83               <---------MYB52(1)   < -->AHL20(2)                  --------->ANAC58      ------>MYB46(1)           <----------DOF2   <---- -----------GT1      --------->KAN4(2)   ---------->DOF2                     <----------DOF2    <----   atttacgactcctctctactgtatattctctcaagtaatgaactaaagtttgccaaccttaacttgtacatgtattgggcctttggttagattaaatggc  4139300  Previous    Next  AGI:  At5g13050.1    Description:  5-FCL; 5-formyltetrahydrofolate cyclo-ligase. similar to unnamed protein product [Vitis vinifera] (GB:CAO62470.1); contains InterPro domain 5-formyltetrahydrofolate cyclo-ligase; (InterPro:IPR002698) Range:  from: 4136559    to: 4138795    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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