Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                =============HOX2a_HOX2a              ------>ZmHOX2a(2)             ==============HOX2a_HOX2a             --------->GLK1(1)             <------ZmHOX2a(2)             <---------GLK1(1)            <---------ARR11(3)                                                                      <            <---------AGP1                                                                          <            --------->ARR11(3)                                                                      -            --------->ARR14(2)                                                                      <            <---------ARR14(2)                                                                     --           <---------CCA1(2)                                                                      ---        <---------MYB52(1)                                                                       ----       --------->TOE2(3)                                                                         ----       --------->TOE1(3)            <---------ANAC46                                            <----     ------>MYB46(1)                --------->DEAR3(1)                                          <----     ------>MYB83          ---------->DOF2                                            ------>ZmHOX2a(2)   --------->DEAR3(1)  --------->At4g35610                                           <------ZmHOX2a(2)  --------->MYB46(3)   <---------At4g35610                                          --------->ARR11(3) -----------GT1     <------ZmHOX2a(1)--------->LBD16                           --------->LBD16 <----- ------ARR14(2)   --------->LBD16--------->ANAC58                       ------->TEIL<---------ARR11(3) ----->ARR14(2)  <---------LBD16 --------->ANAC58<---------ICU4 --------->YAB1 <---------LBD16<------   attcaccaacgttagatctccaggaagcagaaagaacgccgtggaattgaagaattacagaacaaatcgtgatgaattttccgagggatctatgagtcgc  4132800 ---------ANAC46 ---------O2 -------->TGA1a ---------TGA1a                                   <---------MYB46(3) ------->SPL7                 <---------AHL20(2)  <------MYB83          <------NtERF2 --->NtERF2                   <---------ICU4      <------MYB46(1)      ------>NtERF2 ----->DEAR3(1)       --------->ZAT18            <---------AtMYB61   --------->RAP2.6(3) ------->HVH21        <---------ZAT18         <------MYB46(1)      --------->MYB46(3) -----ANAC46       <---------ANAC58    --------->At4g35610        --------->SPL7 --NtERF2----------->RAV1(1)  --------->AHL20(2)<--------P     --------->ANAC46    <---------ANAC58 ----LBD16         <---------ANAC58    <---------At4g35610     --------->ANAC58    <---------ANAC58 ---ANAC46        --------------->AtSPL8      <------MYB83     --------->ANAC58   ---------->ID1  <--   ggacgtgaaacccacattattttgtgccctaattttttctcagttgataggttggtttgagttacacgaacgacggcaagttttgtcgtttcactctcat  4132900                                                     -------->P                                                     ------>MYB46(1)                                              --------->YAB1                                           <----------DOF2                                       <---------ZAT14                                       --------->ZAT14                                       <-------TEIL  ------>MYB83                                 <--                                       <---------ZAT18<---------ALFIN1                --------->YAB1        <----------DOF2            --------------->AtSPL3    <------------------------ANAC81   <----- --------DOF2                 --------->ARR14(2)   --------->AtMYB61---------->ID1  <-----------GT1   ctttctatctcttttggttctgtcttaaacccgaacttcggtacactttcataccaacacttctgtttttgttttttttttgtttttaacatcatatttt  4133000         --------->AHL20(2)         <---------AHL20(2)      <---------ICU4      <--------HAHB4      --------->ATHB51      --------->YAB1      <--------ATHB1                                                                       <---------AHL20(2)      -------->HAHB4                                                                      --------->AHL20(2)     <---------ATHB51                                                                   --------->YAB1     --------->ICU4                                     --------->GLK1(2)      <----------ID1     <---------YAB1           <---------YAB1      ------>MYB46(1)            ---------->DOF2       --   --------->YAB1        ----------->GT1          ------>MYB83            --------->AHL20(2)      --- -------ANAC46     ---------->DOF2                -------->P             --------->AHL20(2)--------->AHL20(2) ------GT1   --------->TOE2(3)--------->ICU4 <-----------GT1        <------NtERF2     --------->AHL20(2)   ctgtgtaataattaatctcaaaaaagcatgttataattcagttttatttaccaacaagaatcgatttggctgcaaataaaaaagacaaaataataaataa  4133100                                                          ----------->GT1                                                <------MYB83                                               --------->MYB59                                             <---------MYB52(1)                            --------->DAG2 <---------DEAR3(2)                           ---------->DOF2 <---------MYB46(3)                   ----------->GT1   <--     ----------->GT1    --------->LBD16   <---------DEAR3(1)               ------------>CBF      ---- ------->DREB2C(2)    <---------LBD16     <---------DREB2C(2)    --------->AHL20(2)            ------ ------>DEAR3(2)     ------->TEIL---------->DOF2<------MYB46(1)  <---------AHL20(2)           -------   accgacattgtgaaaatgttctgaaccggaaaagtcaaagaatgtcggttcggtccaaaatcgaaaattaaacaagttccaatagaaaaatgtgaacaaa  4133200                               <-------GAMYB                              <-----------RAV1(1)                                              <-----                          --------->ALFIN1                                                     <-----                        <---------ANAC58                                                 --------->HSFB2a(1)       *TSS             <---------ANAC55(2)                         <---------CCA1(2)    <---------HSFB2a(1)   --------->DAG2       <---------ANAC58                          --------->REM1(1)      <---------HSFC1(2)  ---------->DOF2       <---------ANAC55(1)               ------>NtERF2                  --------->HSFC1(2) --------ID1            <---------ANAC46                 --------->DEAR3(1)            ---------->DOF2 ------->GT1       <-----------RAV1(1)                --------->TOE2(2)            ------->GAMYB --->MYB52(1)   <-----------RAV1(1)    <---------MYB52(1)----------->HVH21       --------->At4g35610 --->DOF2 >>>>>>>>>TBF1 --------->ANAC55(2) <----------DOF2     <----------DOF2  <---------At4g35610   gggaaaaaggaagaagaaatgttgttgcgtgtgtgttgtccgtcgtctttcttctacctccgaccgcttcatctcttcagttcaactgcgaaagttcctt  4133300                                                                                                   --                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                         <---------MYB46(3)                    <-----                                                      <-----------HVH21                        <-----                                                     <---------ANAC58                         <------                                                     <---------ANAC58    ------>NtERF2        ------>NtERF2                                                  <----------DOF2<---------HSFC1(2)          <-------                                        --------->ARR14(2)       --------->HSFC1(2)          --------                                        <---------ARR14(2)       --------->HSFB2a(1)       <---------ATERF1(1)                                        --------->ARR11(3)       <---------HSFB2a(1)       ------>NtERF2                                        <---------ARR11(3)<-------GAMYB  --------->LBD16  --------->DEAR3(1) ---------->ID1                      --------->HSFB2a(2) <---------DEAR3(2)               --------->ANAC46 -----DOF2                 ---------->DOF2------>ZmHOX2a(2)    <---------GLK1(2)<<<<<<<<<TBF1-------- ----DAG2              <---------YAB1<---------HSFB2a(2) <---------SPL7<---------LBD16    -----------   tttgtccctctcttcccagacaatttcgattaagcccttctcgatcttcttcctttcgtcggatggaatcttctccggcttcttcttcgtctccgacgcc  4133400                                            ---------->DOF2                                 --------->CCA1(2)                                 <------ZmHOX2a(2)  <------------MYB.PH3(1)       <---------ARR14(2) --------->HVH21                <---------ARR11(3) -------MYB52(1)                --------->ARR14(2) ----->LBD16                    --------->AGP1 ------DEAR3(2)                 --------->ARR14(3) ----LBD16                  ---------->DOF2--------->YAB1 -NtERF2  <---------At4g35610   <---------ARR14(3)             <---------REM1(1) ---RAP2.3(1)    <---------GLK1(2)------>ZmHOX2a(2)      <---------MYB46(3)      ---------->DOF2 --DEAR3(1)  --------->At4g35610--------->ARR11(3)     --------->At4g35610    --------->AHL20(2) ->ANAC46 --------->At4g35610 ----------->ARR10        <---------At4g35610<---------YAB1 ->DEAR3(1)  <---------At4g35610<---------AGP1    <---------HSFB2a(2)     <---------TOE1(3)    <----- >HVH21<-------TEIL  <----------DOF2--------->At4g35610<---------ZAT2     <---------TOE2(3)    ------   ggtaaccgattcatctgctgattctttagcgaaagatctgcagaatcaaagtctgggagctgttgatgaaggtgttaagattaaaaagaagctcgaagat  4133500                              <---------ANAC46                          <---------GLK1(1)                      ----------->GT1                        <------ZmHOX2a(1)   <<<<<<<ZML2      <-----------HVH21                        ======================HOX2a_HOX2a   --------->O2                      <---------TOE2(3)  --------->HSFB2a(2)<---------ANAC46                      --------->ANAC55(2)------>ZmHOX2a(1)  <---------TGA1a           ===============         --------->HSFB2a(1)  <---------ANAC58              --------->TGA1a           ------>ZmHOX2a(2)         <---------HSFB2a(1)  <---------ANAC58              =========================================MYC_MYB      <---------PCF5  <---------TOE1(3)  <---------HSFB2a(2)<---------ANAC58        <---------ARR11(3) ----ARR11(3)  <----------DOF2----------->RAV1(2)           <---------ANAC58        --------->ARR11(3) --->ARR11(3)  --------------->AGL15   ------>ZmHOX2a(2)    <---------O2 <---------DAG2      ------->GAMYB   tttaactgggaccattcctttgttaaggaattgcctggtgatcctagaaccgatgttatctcgcgtgaggtatcaatttttgtttcgatcttcaacggag  4133600                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                     <---------CCA1(1)                           <-----------GT1                                           <---------RVE1(1)              <------------------------ANAC81                       <---------HSFC1(1)           <---           --------->YAB1  ---------->ID1                           --------->HSFB2a(2)    <---------YAB1           --------->TOE2(3)                                        <---------HSFB2a(2)    <---------    <------ZmHOX2a(1)---------->ID1 <-----------HVH21     <---------TOE2(3)         --------->ARR11(3) ==========HOX2a_HOX2a    <-----------GT1   <----------DOF2     --------->KAN4(2)   <---------ARR11(3)   ataataggagcaatcttaattttgtttttttccttctctgtcaatactttgtttgtttttgtggtttattctcgaagcatgaagtagatatttatacttg  4133700  Previous    Next  AGI:  At5g13030.1    Description:  similar to hypothetical protein OsI_021963 [Oryza sativa (indica cultivar-group)] (GB:EAZ00731.1); similar to Os06g0320700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057514.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ58930.1); contains InterPro domain Protein of unknown function UPF0061 (InterPro:IPR003846) Range:  from: 4133207    to: 4136691    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version