Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->At4g35610        --------->YAB1                            ------->TEIL             --------->ARR11(3)            --------->AHL20(2)                  <---------TOE2(3)             <---------ARR11(3)       <-----------GT1                         <---------DOF5.7(2)  <---------AHL20(2)              <---------TOE2(3)                       <---------YAB1       <-----  --------->AHL20(2)        ------->TEIL<---------YAB1          <---------YAB1--------->MYB52(1)   gtgtttaatttgcaatatcatctaaatatgtatgttgatgttacaataaatataaacaaatgtgtttttataagttatgctaacgatgaatccatgtctt  4101700                                                                               <---------At4g35610                                                                               --------->At4g35610  <                                                                           <---------ICU4          <-                                                                           --------->ATHB12        --                                                                          --------->ICU4         <---                                                     <---------AHL20(2)   <---------YAB1      -------                                               ----------->GT1           <---------TOE2(3)    <------                                  <---------GLK1(2)  --------->AHL20(2) <---------ICU4        -------                          --------->YAB1    <---------REM1(1)           --------->YAB1       <-------     --------->YAB1  <---------ZAT18        <---------ANAC46         --------->YAB1      ----------->GT1 -----DOF2 --------->YAB1<-------TEIL <---------YAB1 --------->AHL20(1)--------->ICU4  ---------->DOF2   tctgaaatcagaatcatagtttgtgcattcatgaaatattctcatggtgtagaaataaaatgttgagaacataataatgtttgcagacagaaagtatatt  4101800        <---------ATHB12    <---------ZAT14                                                             --------->TOE2(3)    --------->ZAT14                                                       --------->ANAC46 ---------DEAR3(1)                                                        --------->ANAC58 --------At4g35610                                                        --------->ANAC58 ------->At4g35610                                                 <---------ICU4 ------RAP2.6(2)                                                   --------->YAB1 -->KAN4(2)                                                       <---------ATHB12 ---ARR14(2)          <---------ETT(2)                      <----------DOF2     --------->TOE1(3) -->ARR14(2)        --------->At4g35610               --------->ATHB12 --------->ZAT14 ---TaMYB80   ---------->DOF2 <----------ID1------>ZmHOX2a(1)   --------->WOX13(1)     <-------TEIL   cggctgtgcaatgaaacaaagcagtagacaaaaaaacaaacaagtcctacaaacattgatttctttcaatcaatacactcaaccttaaatgcattactaa  4101900                                                     ---------->DOF2                                              <------MYB83           <---------ANAC46             ---------->DOF2    ----------->GT1            ----------->GT1           <---------YAB1   --------->YAB1    <------MYB46(1)                        --------->DAG2      <---------------AGL15--------->ICU4    --------->MYB111(2)                    ---------->DOF2      --------------->AGL15----------->GT1   --------->MYB111(1)          ----------->GT1     -------   aaactaaactattacgagtaagtgaagaaatgataaactaataaaagttggtagagaaagagagtgaaattggaagtggctaatagaaaagtaagaaaaa  4102000                                                                  <---------ALFIN1                                                                --------->ANAC58                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                     --------->ARR14(3)                                                     <---------ARR14(3)                                                     <-----------ARR10                                                     --------->ARR11(3)                                                     <---------ARR11(3)                                            --------->DAG2      --------->ANAC58                                    <-------TEIL     --------->ARR14(2)        <---------ARR14(2)                                 <------MYB46(1)     --------->AGP1  ------->MYC3                                 <------MYB83        <---------ARR14(2)        <---------ARR11(3)                                <---------AtMYB61    <---------AGP1 --------->O2                                --------->MYB59  --------->At4g35610<---------O2                               <--------P  ---------->DOF2   <---------ZAT18   --------->ARR14(2)                    ----------->GT1 <---------ZAT18 <---------ARR14(1)        <---------CCA1(2)  <---                    <----------ID1  --------->ZAT18 <---------CCA1(2)<-------MYC3                <---            ---------->DOF2    ===============================================MYC_MYB            ----    --------->AHL20(2)       --------->ALFIN1    <---------At4g35610<---------TGA1a            ------    <---------AHL20(2)       <---------REM1(1)  ----------->RAV1(1) --------->TGA1a            <----- --->DOF2 <---------YAB1 ---------->DOF2   ===================================bZIP_DOF     <---------   gatgaataaaatatgaaagaagaggtcaaaagtgtaggtccactaaaaagcagcagatcttagcacacccacatgtccccatatattctatttctactgt  4102100                            --------->ZAT18 ------ZAT18                <---------ZAT18 ------ZAT14              --------->At4g35610                       <----------DOF2 ----->ZAT14     <---------ZAT14                                 <-----------GT1 --->ZAT14       --------->ZAT14                         <-----------GT1 ----ZAT14     --------->ANAC46                         <-----------GT1 --GT1   <<<<<<<<<TBF1 ---------->DOF2*TSS--------->ANAC46<---------TOE2(3)         <---------AtLEC2   acactctcttcttcttcacttcactaaaagctcactactcttcttcgcaatctcatttttaacattttcactttcttctaaactttgcattacaaaaaac  4102200                                          <---------TOE2(3)                                          --------------->AtSPL3                                    ------>ZmHOX2a(2)                                    ===============================HOX2a_HOX2a                                   ================================HOX2a_HOX2a                                   <------ZmHOX2a(2)                                              <--                                  --------->ARR11(3)              <-----------GT1             <------                                  <---------ARR11(3)        ------>ZmHOX2a(1)                 -------  ------->TEIL              --------->ATHB12  <-------TEIL <---------MYB59          <---------MYB46(3)   aatgtatttccaagttgttctctctattcttcattagatcccttgaggtacattaccatgtcctaatttttctattggttttgtatttgttgatatttat  4102300                                              --------->ZAT14  --------->AHL20(2)                                        ----------->RAV1(1)<---------RVE1(1)                                       ----------->HVH21   <---------CCA1(1)                                  --------->MYB52(1)      --------->ARR11(3)                                 ----------->HVH21        <---------ARR11(3)                               --------->ANAC58           --------->AHL20(1)         <---------MYB46(3)    <---------ANAC55(2)     <---------TOE2(3) <---------ANAC46              --------->ANAC46       ---------->DOF2 -------AHL20(2)               --------->ANAC58      <---------AHL20(2)      <---------ANAC58 ---AHL20(2)                   --------->ANAC55(2)   --------->AHL20(2)      <---------ANAC58 -->AHL20(2)              --------->At4g35610 <---------ZAT14  <---------AHL20(2)  <-----------GT1<--   attatgtgtagttgttgttttgatcagtagctcaagtaacagcgacagtgaagaattaaagatattaaaacaaaacatttcttgtttactcttcttgttt  4102400                          <-----------GT1                <------ZmHOX2a(2)                    <---------TOE2(3)           <----------DOF2 ------->GAMYB --------->ARR11(3)   <---------AHL20(2)----------->GT1       <-----------GT1 ---------GT1  <---------ARR11(3) <----------DOF2   ---------->DOF2       <-----------GT1        <---   taactgtctctcaagtagatcatcttgtttactcttcttttattgtattttgtttaaagtaaaatgatgttttttttttctctctttctaaaatgttcac  4102500                                                                 ----------->GT1                                                                --------->DAG2                                                               ---------->DOF2     <---------LBD16                                                    <---------AHL20(2)          <---------ANAC58                           ---------->DOF2         <---------AHL20(2)           <---------ANAC58   <-                     <---------HSFB2a(2)           --------->AHL20(2)    <-------TEIL        <------- -------DOF2   <------ZmHOX2a(2)         <--------P<---------AHL20(1)   <-----------GT1 --------->GLK1(2)   tttcgagttttgtttggatcagcctagaagaaagctaagagaggttgctctaatttttttgaagaaaaagttatatacattttcttggggaatctcttta  4102600  Previous    Next  AGI:  At5g12960.1    Description:  catalytic. similar to catalytic [Arabidopsis thaliana] (TAIR:AT5G12950.1); similar to hypothetical protein OsI_006095 [Oryza sativa (indica cultivar-group)] (GB:EAY84862.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21942.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21954.1); contains InterPro domain Six-hairpin glycosidase-like; (InterPro:IPR008928); contains InterPro domain Protein of unknown function DUF1680 (InterPro:IPR012878) Range:  from: 4097704    to: 4101671    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g12970.1    Description:  C2 domain-containing protein. similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G51570.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G11610.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G57880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21962.1); similar to C2 [Medicago truncatula] (GB:ABN08649.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23368.1); contains InterPro domain Phosphoribosyltransferase C-terminal, plant (InterPro:IPR013583); contains InterPro domain C2 calcium-dependent membrane targeting (InterPro:IPR000008); co Range:  from: 4102138    to: 4105330    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version