Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           --------->At4g35610                                                         <---------At4g35610                                                    --------->WOX13(1)               <---------ETT(2)                    <---------AHL20(2)          --------->At4g35610      ----------->GT1 ---------->DOF2   <---------GLK1(2)  --------->YAB1       <----------DOF2 ->RAV1(2)<---------At4g35610   --------->MYB52(1) --------->AHL20(2)                              --   atacaaattcttagctctcgacaagaatatttgaaaacggagaaactttacaataaatcagatgaaaaattcttacatgggttatacatgggttctcgtt  4081700                                                                                   <---------YAB1                                     --------->ANAC58                            --------->YAB1                                     --------->ANAC58                            <------ZmHOX2a(1)                              --------->ANAC46--------->ANAC46                 <---------TOE2(3)                          <---------ATHB12  --------->ANAC46                 ---------->DOF2        -                         <---------ARR14(2) --------->ANAC58              --------->TOE1(3)        --          ----------->GT1<-----------ARR10<---------ALFIN1                --------->TOE2(3)     <----  ----------->GT1        --------->ARR14(2) --------->ANAC58              <----------DOF2    <------- ------->ANAC55(2)  <-----------GT1  --------->ANAC46                 --------->MYB46(3)     <-------   caagtgataaaaatgtgaaaatttcccaatcttcgcaacaaggaacacccaaaacaaaatcccaatatgtcaacaactttaaaggataattagtctcagg  4081800                                                                              --------->At4g35610                                                                            --------->SPL7                                                                            --------->ZAT14                                                                            <---------ZAT14                                                                          <---------SPL7                                                                         <---------DEAR3(2)                                                                        --------->ETT(1)     <---------YAB1                                                     <---------At1g77200 ----------->GT1                                                        --------------->AtSPL3 -------->DAG2                  --------->TOE2(2)                      <<<<<<<<<<DREB2A -------->DOF2                  --------->TOE1(2)                      <<<<<<<<<<DREB1A --ZmHOX2a(1)           ----------->GT1     <---------KAN4(2)      <---------ANAC58 --LBD16                <---------ANAC46  <------ZmHOX2a(1)        <---------ANAC58      <---------ATHB12 ----RAV1(2)     --------->MYB52(1) --------->LBD16            <---------ZAT6 <---------At4g35610   aaaaagtaagattgaaaacgaagggagcgtaaaacctccgagtaggaatgagcaactcgagaatagagttcgtgtcggtacgctgaatccaatcgtccat  4081900                                                          --------->MYB52(1)                                                         ------->GAMYB                                                        <---------MYB52(2)                                                        --------->MYB46(3)                                                      --------->MYB52(1)              ------>ZmHOX2a(2)                     --------->MYB46(3)             <------ZmHOX2a(2)                     --------->ANAC58            --------->ARR11(3)                     --------->ANAC58            <---------ARR11(3)       ----------->GT1<---------ATHB12        ---------->DOF2       <-----------HVH21   --------->WOX13(1)       --------->AHL20(2)   <------NtERF2     ------->GAMYB                                        <-   tcacttcgattaaagatcgcttccatggtcgccttcaaggggaaacaatcgccaatcaacgaacagagaagatgagagaaatagaaacttagtagattga  4082000                                      --------->LBD16                                <---------HSFC1(2)                                <---------HSFB2a(1)                                --------->HSFB2a(1)                                <---------MYB46(3)                                --------->HSFC1(2)                               <---------AtMYB61                            <---------DEAR3(1)                  <---------ARR11(3)  ------>NtERF2                  <---------GLK1(2)  <---------ANAC46               --------->HSFB2a(2)<---------ARR14(2)               >>>>>>>ZML2 <------NtERF2    --------->MYB52(1)    ------>NtERF2   ----------->HVH21      --------->LBD16  <---------MYB59 --------->ARR11(3)<---------LBD16                                         --------- --------->At4g35610     <---------ATERF1(2)                                               <---------ARR14(2) ----------->RAV1(2)     --------->ATERF1(2)                                               <---------GLK1(2) --------->ANAC55(2)     <---------DEAR3(1)                                                --------->ARR14(2) <---------ANAC55(2)    <---------LBD16                                                <---------LBD16 ----------GT1 <---------HSFB2a(2)--------->ARR14(2)                           --------->YAB1   attacctgaccgtagttctagattttgccggcgatggttccggcgaaactaagtatttctccattgatttttgacctcgactgataatttggggattctt  4082100           --------->LBD16           ------>NtERF2                                                      ---------->DOF2          --------->ANAC46                                                <---------AHL20(2)          --------->ANAC58                                                --------->AHL20(2)          --------->ANAC58                                               --------->AHL20(2)      <-----------GT1                                       <-----------TBP   <---------ICU4 <---------AHL20(2)                                 --------->DAG2       <---------ATHB12 >GLK1(2)<---------LBD16          <-------TEIL     ---------->DOF2   ------------>CBF    --------->AHL20(2)   aagttaattttcccgccattcacttctgggtttaagtccataactagtccaaataaagtcgaatttataagcccaattaataaaggcccattttaaaact  4082200                                                 >>>>>>>>>WRKY18                                   <---------ARR11(3)               <---------HSFB2a(2)                                   <---------ARR14(2)              ------>ZmHOX2a(2)                                   --------->ARR11(3)             <------ZmHOX2a(2)                                   --------->ARR14(2)            --------->ARR11(3)                                   <-----------ARR10             <---------ARR11(3)                            --------->ZAT14      <---------WRKY18(1)--------->HSFB2a(2)                            <---------REM1(2) <---------ANAC58   <---------AGP1          <---------At5g28300     <---------ARR14(1)        <----------DOF2                         <       --------->AtLEC2     <---------ZAT14   <---------ANAC58  <---------CCA1(2)    <----------DOF2-   aaatgggccattcacagtttatttcttctgtacacagtatcttcgcttccttgacttccaagctttagatctcgaactcttctcaagctttgaaactaaa  4082300                                                                   ------>MYB46(1)              <----                           <---------ARR14(2)                      ------>MYB83               ------>NtERF2                           --------->ARR14(2)                    <---------MYB111(1)    ------>ZmHOX2a(1)                           --------->ARR11(3)                    --------->TOE1(2) --------->ATERF1(1)                           --------->ARR14(3)                    <---------MYB59  <---------At4g35610                           <---------ARR14(3)                  ------->TEIL       ------>NtERF2<-----        <---------At4g35610<---------ARR11(3)          ------->GAMYB           --------->At4g35610 ---------At4g35610      ----------->ARR10            --------->MYB46(3)       --------->ZAT14>>>>>>> -------->At4g35610 <------ZmHOX2a(1)       --------->ANAC46  <---------ARR11(3)  <---------ATERF1(1)   tgagctgttttgctcacatcaaggacgaagatattccactacttcaacaccattcaacgaccaagaacctactaacaaaactgcagcctcctatgcctcc  4082400                                                                                            ------>ZmHOX2a(2)                                                                                            <--------                                                                                           <------ZmHOX2a(2)         --------->At4g35610                                                               --------->CCA1(2)         --------->ZAT2                                                                   --------->AGP1         <---------At4g35610                                                              --------->ARR11(3)         <---------ZAT2                                                                   <---------ARR11(3)  <---------CCA1(2)                     <----------DOF2                                   <---------- -----ALFIN1                            <---------DAG2              ------->GAMYB         <---------AGP1 ----ZAT14                          ------>ZmHOX2a(1)        <----------DOF2          <--------P <--- >>>>>>>>>>LFY                <-------TEIL             <---------ALFIN1          ----------->RAV1(2)   actggtatctcagcttgctcttcttgatcaagtccatcctcactttatggccagtttccaccgctttcaacggggatgatacaacctggtaagatctaac  4082500                                                               <------ZmHOX2a(1)                                                            <-----------RAV1(2)                                                           --------->At4g35610                                                           --------->ZAT2                                                           <---------ZAT2                                                           <---------At4g35610                    <-----------------------TaNAC69(2)--------->ALFIN1     --------->ANAC58            --------->LBD16     <-------MYC3     --------->ANAC46      ---------->DOF2           ------->MYC3                   --------->ANAC58     --------->ANAC58<---------ANAC46  ----------->HVH21 <---------PCF2             --------->ANAC58 -MYB59     --------->ANAC58    --------->RAP2.6(2)  --------->TOE1(2)          --------->ANAC58 -ARR10     --------->ANAC58   <---------LBD16      --------->O2                --------->ANAC58 -------DOF2--------->ANAC46--------->DAG2          <---------O2      <----------DOF2   ttttagcaagcaatacccaagttaagtggaaaagccggacactgacacattacaacgtgggagcaggagtgtctttgtgagaacgcatggaactggtttt  4082600  Previous    Next  AGI:  At5g12920.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO21948.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943) Range:  from: 4077776    to: 4082064    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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