Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------YAB1                            --------->YAB1 <----------ID1             --------->ATHB12 ----->DOF2                <---------YAB1     ---------->DOF2 >ANAC58                 --------->YAB1  ----------->GT1 >ANAC58              --------->YAB1   ---------->DOF2   aagagaacaaactcatggaaccaagaagaatgataagtgggaaaagagaaaagagagagagagagagagagagagagagagagagagagagagagagaga  4074200                                                                                    ---------->DOF2                                                                                   ----------->HVH21                                                                                   --------->ALFIN1                                                                                   <---------REM1(1)                                                                                 --------->At4g35610                                                   <---------At4g35610         ======================RAV                                                   --------->At4g35610         <-----------RAV1(2) <-                                              --------->YAB1               ---------->DOF2   --------                             ----------->GT1  <---------ICU4          <------ZmHOX2a(1)   <---------At4g35610                            <------ZmHOX2a(1)--------->ICU4        <---------At4g35610    --------->At4g35610                         <-----------RAV1(2) <---------ATHB12      --------->At4g35610   ----------->RAV1(1)   gagagagagagagagagagagagagttacaggagtgaaaacagggtaatcatgagcagagaggttagggagaggacgagaagcaggtgaagcagcagaag  4074300                                                                                 --------->ANAC46                                                                                 --------->ANAC58                                             <---------At4g35610                 --------->ANAC58                                             --------->At4g35610    --------->ZAT18                                    <----------DOF2                 --------->ZAT14        <---------GLK1(1)          <---------ANAC58                 <---------ZAT18 -----ZmHOX2a(1)    <---------YAB1 <---------ANAC58                 <---------ZAT14             <---- ->At4g35610       --------->At5g28300<---------WRKY18(1)    <----------DOF2  --------->ZAT14   <----   aggaagaagggtttctgagactgtaattggaagatgggcttgacttcatctgcataagactcgcttgaagtgctctcaacttcactccatttgctatggc  4074400                                       --------->ANAC58                                  <---------At4g35610                                  --------->At4g35610   <----------DOF2     <---------YAB1  --------->ANAC58 -----ANAC58   <---------ANAC58 --------->HSFB2a(2)      <---------------AtSPL8                ------ -----ANAC58   <---------ANAC58 <---------HSFB2a(2)     <---------ARR11(3)                 <------ZmHOX2a(1)   ttcttctttttctcttgccttgttcattcttgtttcagaagaagccatggtagaacaagatagtacaagattagaacttagaagagaagagaaggatgtg  4074500                                                   --------->REM1(2)                                                   <---------ZAT14                                                  ----------->HVH21                                                --------->ALFIN1                                            --------->DAG2  ---------->DOF2                         ---------->DOF2 ----->HVH21                         ---------->DOF2     <------ZmHOX2a(1)   acacaaaagagagagaagagatagtgaatgcgattgtgcaaaagaaaagggtgtgaagaggatgatgtctctgtgtgtgtgaagaagagagagagagaga  4074600                         <---------HSFB2a(1)                         --------->HSFC1(2)                         --------->KAN4(1)                             ----------->HVH21                         <---------KAN4(1)                            <-------MYC3                         <---------HSFC1(2)                ---------->DOF2                        <---------KAN4(2)--------------->AGL15        ------->MYC3                      *TSS--------->KAN4(2)       <------ZmHOX2a(1) ------->TEIL<------NtERF2               --------->GLK1(2)         <---------------AGL15   --------->ANAC58                   <          ----------->GT1--------->HSFB2a(1)  ---------->DOF2    --------->ANAC58             <------   gagagagagagatagaaaatccaaagaatgttctgtctcccttctcttaaaaggactgatagaaagaacgcatgtgaagggcagagaccattttttatgt  4074700      <-----------GT1                                                                   -------->ATHB1    --------->YAB1       <----------DOF2    <----------DOF2             ----------->GT1 --------->ATHB12 --------->TOE2(3)    <-----------GT1       <---------DAG2       --------------->AGL15  --------->ATHB51 --------->YAB1      ---------->ID1  <-----------GT1             <---------------AGL15 <---------YAB1 ---------YAB1<---------DAG2        <XXXXXXXXXXXXXXXXXXXXMIR1886.1>>>>>>>>>GT-1        --------->ICU4 ---YAB1      <----------DOF2    <---------AHL20(2)            ----------->GT1    --------->YAB1   --   ttacgataataccctccttttttgtttcttttcattttttttctcacttttctcattttgttttttggttaatatggtaacatatcagaattattgaaca  4074800                                                                                     ----------->GT1                                                                                     --------->YAB1                                                                                 <---------AHL20(2)                             <---------ICU4                                      --------->AHL20(2)                             --------->ATHB51                                   <---------YAB1                            <---------YAB1                               --------->YAB1    ---------->DOF2       --------->ANAC55(2)             --------->GLK1(1)----------->GT1  --------- ------->ZAT14          <-----------GT1        <---------ZAT6           <---------YAB1   --------->WOX13(1)   gtttacaaaagctaattccagtttttttacataattgttatcttatctactgctaaacacatttccactgttttatgatgttattaattgtaaatcaaaa  4074900                    --------->HSFB2a(2)  <---------ANAC46                    <---------HSFB2a(2) <---------LBD16              <---------ARR11(3)      <----------DOF2            <---------YAB1         ------->TEIL                      --------->CCA1(2)   <---------At4g35610            <---------CCA1(2)           <---------MYB46(3)             -------- >YAB1      --------->ICU4 <----------DOF2                    <-----------RAV1(1)       <-----------GT1   tgtttatctgagacatgattttctataagctttgttgtatctttcggataaatgggtaagacaattgttggatatagattactggatttttttccatcca  4075000                                              --------->GLK1(1)                         --------->HSFB2a(2)                                              <---------GLK1(1)                         <---------HSFB2a(2)           ---------->DOF2               <---------LBD16                                <---------HSFC1(1)        <---------YAB1                  <---------HSFB2a(2)                    <---------AHL20(2)      --------->YAB1                    >>>>>>>ZML2             --------->CCA1(2)       --------->HSFC1(1)      <--------HAHB4               <---------MYB46(3)          --------->ARR11(3)    --------->ARR11(3)     <---------YAB1              <---------ANAC46              <---------ARR11(3)---------->DOF2 ->AtLEC2 <---------AHL20(2) <---------------------WRI1  ---------->DOF2       --------->AHL20(2)   aacatctattattaaaagaaaaacaagagtatgtggtttgttctagggaattctattactaaagagatatgtgttattcatttaaaagctctagaaaatc  4075100  Previous    Next  AGI:  At5g12900.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G12330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21950.1); contains domain Spectrin repeat (SSF46966) Range:  from: 4071922    to: 4074622    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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