Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 ------>NtERF2                                                                              ------>NtERF2                                                                      <-----------GT1                                                                <---------AHL20(2)                                                                --------->AHL20(2)      <-----------GT1                                          ---------->DOF2       --------->YAB1--------->ANAC46                                   <---------At4g35610 <---------HSFB2a(2)    --------->LBD16    <--- >GAMYB                            --------->At4g35610 --------->HSFB2a(2)  <---------LBD16      ----   aaacaaattaagctacacaagtttaaaaacaagactcaccagacaaaagctagtttgccagaacatttatatttatcttccggccactagtttccatatt  4064600                                                                                                 ----                                                                                               ======                                                                                               ------                                                                                              =======                                                                                              <------ZmHOX2a(2)                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                            <--------                                                                                            ---------                                                                                           ----------                                                                                       --------->ATHB12                                                                     <------ZmHOX2a(1) --------->YAB1                                            --------->At5g28300      ================================HOX2a_HOX2a              <---------MYB46(3)           ----------->GT1           ================================         <---------MYB52(1)             -------->HAHB4            ------>NtERF2       <---------ATHB12 ------AHL20(2)       <---------YAB1    --------->YAB1            --------->LBD16     --------->ICU4 ----->AHL20(2)    <---------YAB1      --------->ICU4      <-----------RAV1(1)---------->DOF2<-------   ttattctatctcttagttgttgttattatgtcaaaaccaaaatgatggtaaaaatgtaaacctgttgccgaggatggaatgaaagcgaatgatgagatcc  4064700 -->ZmHOX2a(1)                                                   <------NtERF2 =============HOX2a_HOX2a                                        <---------ZAT2 >ZmHOX2a(2)                                                     --------->At4g35610 =============HOX2a_HOX2a                                        <---------At4g35610 ->ARR14(2)                                                   <------NtERF2 --ARR14(2)          --------->ANAC58                       --------->ANAC58 --ARR11(3)          --------->ANAC58                       --------->ANAC58 ->AGP1<------ZmHOX2a(1)                            --------->MYB52(1) ->ARR11(3)         ------>NtERF2                 --------->MYB46(3) -GLK1(1)          --------->DEAR3(1)    --------->ARR11(3) --------->ANAC46              <---------TOE1(2) >GLK1(1)          <---------ALFIN1      <---------ARR11(3)--------->RAP2.6(3) <----------DOF2 ->ARR10        --------->ANAC46  <------ZmHOX2a(1)--------->TOE1(2)        <---------ARR11(3) =HOX2a_HOX2a--------->DAG2       =======================HOX2a_HOX2a       <---------ALFIN1       --- --GLK1(2)  ---------->DOF2  <-----------HVH21    ------>ZmHOX2a(2)<----------DOF2       ------>ZmHOX2a(1)   tcttcttgaggagagaaagcgccacgcttgaggtcaggacgaagatagttgatccaacgaagacggcagcttttgccacatctttgaagtcctgcgtttt  4064800                  <---------ANAC58                                <------ZmHOX2a(1)                  <---------ANAC58                             <-----------RAV1(2)   --------->REM1(1)                                          ------>ZmHOX2a(1)                 <----   --------->bZIP60(2)       <---------ANAC58     <----------DOF2<---------At4g35610            <---- ----------->RAV1(1)         <---------ANAC58   --------->At4g35610     ---------->DOF2     <-------- ------>ANAC46 <---------ARR11(3)            <---------At4g35610 --------->At4g35610        <--------   tcgcaacatcactccaacatccttgtccattgcttaacatgtattgcatcagctttgagtcttcctcaggagaccaaagtcccttcttcatcttctttac  4064900                                                                                                  <--                                                              --------->ICU4                     <---          --------->At4g35610                                 <---------YAB1                    <---- -----ANAC58                                 <---------MYB46(3)                                 ----- -----ANAC58                  <---------ANAC58    ----------->GT1 <-----------GT1              *TSS < --DOF2   --------->ZAT2      <---------ANAC58<-------GAMYB<---------YAB1             <----------DOF2 -------AGL15         -------->P   ------>ZmHOX2a(1) <---------AHL20(2)             ---------->ID1---   ttggtgagtactagctgcaatggctacctctggcttcctcatatttttggttgagttaattgttattatttctcttcaatttgtttgtctttctcaagga  4065000                                                                                   ---------->DOF2       ----------->HVH21                                                       <---------YAB1       <XXXXXXXXXXXXXXXXXXXXMIR783                                          <---------YAB1 -----TEIL                                                                --------->YAB1 ---ZmHOX2a(2)                                                           <---------YAB1     <-------GAMYB -----ARR14(2)                --------->YAB1                             --------->ICU4    <---------MYB46(3) ---->ARR14(2)               <---------YAB1                            --------->YAB1      <------MYB46(1) ------------CBF           --------->YAB1 ---------->DOF2             --------->ICU4       <------MYB83 --->ZmHOX2a(2) <---------ZAT14      ----------->GT1       <---------REM1(1)--------->ICU4<---------AtMYB61   tccattgatgtgaacgagtgaagtttgttttataatagagagagaaaagagagaagacttgatgaagggagaatgatgatgatgagaaagggatggttgt  4065100                                                                         <---------YAB1                                                                         <---------AHL20(2)                                                                        <---------AHL20(2)                                                                      <---------AHL20(2)       ------                                                                   <---------AHL20(1)          ------                    ----------->GT1                                --------->AHL20(1)         <------               --------->HSFB2a(2)                                 <---------AHL20(2)       ---------               <---------HSFB2a(2)                                <---------AHL20(2)    <---------YAB1              <---------LBD16                                     --------->YAB1       <---------AHL20(2)            --------->GLK1(2)                                ------>ZmHOX2a(1)         --------->AHL20(1)        <-----------------AGL1                              --------->TOE1(3)     --------->AHL20(1)     <---------ANAC58                           <---------AHL20(2)--------->AHL20(2)   <---------AHL20(1)     <---------ANAC58                       <----------DOF2 --------->TOE2(3)     <---------ARR11(3)   atggtttgcttacaattctgggaagaaaaaccatttgcacttcttcctttttaatctctattccttaattatatttttattgtatatattatatttataa  4065200                                                                                    <---------ARR14(2)                                                                                    --------->ARR11(3)       <---------ANAC58                                                             --------->ARR14(2)  <-----------RAV1(1)                                                        --------->RAP2.6(3)  <---------ZAT6                                  <----------DOF2            ---------->ID1 --->AHL20(2)                             ----------->RAV1(2)              <-----------RAV1(1) ------ --->YAB1                         --------->TOE2(2)                   <---------AHL20(2)      <------ ---YAB1<----------DOF2           --------->TOE1(2)         <---------AHL20(2)  <------NtERF2 <------ >YAB1 <---------ANAC58 ---------->DOF2 ------->TEIL        --------->AHL20(2)--------->ETT(1)-------   tatagtgttgctttgttttaaaacataaaagaaaaacatccgaaccctggctctttttcaaattaaacacattttttttgtcggcatatattgtgtaagg  4065300                   --------->MYB46(3)                  ------>MYB46(1)                                               --------->WRKY18(1)       --------->AHL20(2)                                                      <-----------HVH21       --------->AHL20(1)                                                    ------>ZmHOX2a(2)       <---------AHL20(2)                                              <-------GAMYB  <---------AHL20(2)                                                  --------->MYB55(2)  --------->AHL20(2)  --------->MYB46(3)                              --------->MYB46(2)  --------->AHL20(1)----------->RAV1(1)                               --------->MYB52(2) ----->GT1        ------>MYB83                                      <---------MYB52(1) ---TOE2(3)      ----------->RAV1(1)                               --------->TOE2(3)   --------->ANAC58 ---TOE1(3)     --------->AtMYB61  <---------ANAC46 <---------TOE2(3) <---------MYB46(3)   --------->MYB52(1) -->MYB59    --------->ANAC46------->TEIL <-----------GT1          --------->TOE1(3)   --------->ANAC58   taaataaaataaaatacaccaacaacaaatgtatgttttgtatataactaatttgacgaaatgaagaaacgttagttgatcggtcatggacgaaaacggt  4065400                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                             <----------DOF2                                                                       <-----------GT1                                                                      <------------------------ANAC81                                                                   <------------------------ANAC81                          ---------->DOF2                         --------->AHL20(1)               --------->AtLEC2                                   <---------AHL20(2)             --------->GLK1(1)               --------->ZAT18      <---------AHL20(1)             <---            --------->ARR14(2)     --------->DAG2                 --------->AHL20(2)             ----            <---------ARR14(2)    ---------->DOF2                --------->AHL20(2)     <----------DOF2   ---------->DOF2     --------->TOE2(3)     <---------ZAT18     <---------AHL20(2)  ---------->ID1   tttgaaaaagacccgatatgcaaaacatcaaagaaaaaaaggagaagtgctcttcacttgttcttaattttattttcttcttttcttgttctttttgaat  4065500  Previous    Next  AGI:  At5g12870.1    Description:  AtMYB46/MYB46 (myb domain protein 46); DNA binding / transcription factor. similar to MYB83 (myb domain protein 83), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G08500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21914.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 4062727    to: 4064995    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version