Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------ANAC58           <---------ARR11(3)                           <---------CCA1(2)                 --------->ARR11(3)                          ------>MYB46(1)      ----------->GT1 ------>ZmHOX2a(2)      ------->TEIL        ------>MYB83        --------------->AtSPL8 ----->YAB1        <-----------HVH21          <---------------AtSPL8 ------ICU4       --------->AtMYB61--------->LBD16       <---------ANAC55(2) -----YAB1     <---------ALFIN1   <---------ANAC58       --------->ANAC55(2) -->YAB1 <----------DOF2 <---------CCA1(2)    --------------->AtSPL3  --------->TOE2(3) --AHL20(2)   <---------ZAT18    <---------LBD16       --------->AHL20(2)              <------ZmHOX2a(2)   catcgatgaagctttgtccaccttcacctatctcttccgcgtctatgtatggtacaattacatgatcttctacattaacttcggtctcgatccattttgc  4026300                                            <-----------HVH21             --------->ZAT14                --------->TOE2(3)             <---------ZAT14               --------->ANAC46          <-------TEIL                 <--     --------->YAB1                   --------->ZAT6                 <---------ZAT14             ----    <---------YAB1  --------->ANAC58------>MYB83                     --------->ZAT14             <--- --------->ICU4     --------->ANAC58------>MYB46(1)              <---------ICU4       --------->YAB1   accattatcagactgtgaagtcaagacaaatggaaaccaaacactacgtcaaatcacaaataagacataagtacagttcttatgtctataaaaaacatat  4026400                              --------->YAB1                              --------->AHL20(2)                          --------->ALFIN1       --------->DAG2      --------->YAB1                           --------->ARR14(2)     ---------->DOF2     <---------YAB1                             <---------ARR14(2)  --------->AHL20(2)     <---------WOX13(1)                    --------->TOE2(3)  <---------AHL20(2)   ----------->GT1                  ----------->GT1   <---------ANAC46 -------AHL20(2)      <---------YAB1             --------------->AGL15   <---------MYB52(1) ----->AHL20(1)   <---------AHL20(2)             <---------------AGL15  --------->LBD16 ------AHL20(1)   --------->AHL20(2)--------->YAB1    ---------->DOF2 <---------LBD16               -   atatttaaaaaggctgatatttatatgattaataatattcaaaattttgttctatagaaagtaaaacttaaatccggtgtgaaaaacaactatatgtgta  4026500                                             --------->At4g35610                                           --------->ZAT14                                           <---------ZAT14                                   --------->ZAT14             <---------ANAC58                                   <---------ZAT14             <---------ANAC58                                 --------------->AtSPL3        <---------ANAC46    --------->ANAC58                                 --------------->AtSPL8       --------->ATHB12     --------->ANAC46       --------->GLK1(2)    <---------------AtSPL8         <------ZmHOX2a(1)       --------->ANAC58 ---------->GT1             <---------------AtSPL3   --------->CCA1(2)         <----------DOF2   agaagtaagaatatgtgtgtatatttgttttaagtactgtaccagtatgctggagaaacgaggatgcttggagacattttgcttcaaggcatcaagaaca  4026600                                     <---------ANAC55(2)                                     --------->ANAC55(2)                                     --------->ANAC55(1)                                     --------->bZIP60(1)                                     ================================MYC_MYB --------->DEAR3(1)                                     <---------TGA1a                        <------NtERF2          --                                     --------->bZIP60(2)                   ------>NtERF2        -----                                     --------->TGA1a                      --------->ANAC46     <-----                                     <---------bZIP60(1)                 ------->MYC3        <-------                                     <---------O2                        <-------MYC2        ------>NtERF2                                     --------->ANAC58                    ------->MYC2  -------->P <--                                     --------->O2                        <-------MYC3 --------->MYB52(1)                                     --------->ANAC46        <-------GAMYB--------->ANAC58  <--------                                     --------->ANAC58       <---------MYB46(3)       ----------->HVH21                                    <---------LBD16       <------NtERF2 --------->ANAC58    ---------           <---------ICU4        <-----------HVH21       --------->LBD16--------->ANAC58 ------->GAMYB      <---------KAN4(2)     <---------ATHB12            <---------DEAR3(1)--------->ANAC58<---------ATERF1(1)   <------NtERF2            --------->ICU4             <---------LBD16  --------->ANAC46--------->DEAR3(2)   acgtcgggattaatctttgttttgaaacccatgatggtcacggcacataagtctatgcccggcgattggaatacacgcgccatcgggctaaccggctcct  4026700  --------->LBD16 ---->ZmHOX2a(1)                                                                                ----- ->ZmHOX2a(1)                                                                                ------->GAMYB ----ALFIN1                                                         <---------TOE2(3)       --------- --ATERF1(1)                 --------------->AtSPL8             --------->YAB1              --------- -------ALFIN1    <---------DAG2          *TSS                <-----------TBP            <---------WRKY12 -ARR14(2)        <----------DOF2  <----------DOF2        --------->YAB1             ----------->GT1 >ARR14(2)     <-----------GT1   ------->TEIL        ------------>CBF                <---------MYB46(3)   cctccccataagtcattttccttttccctcttatgtactttcttctctcatgtgttccaatggtatttataacgttgagtttgtaagtggttcaacgaca  4026800                                                                                  --------->CCA1(2)                                                                          <---------ANAC46                                                                          <---------bZIP60(2)                                                    ----------->GT1    ----------->TGA1                          --------->DAG2           --------->DAG2      ----------->HVH21 ------>RAV1(1)          ---------->DOF2          ---------->DOF2   <---------TOE2(3)       <-------- >ANAC46           <---------AtLEC2         ------>ZmHOX2a(1)     <---------AHL20(2)        --------- >MYB46(3)     --------->ALFIN1         <-----------GT1          --------->AHL20(2)      <------ZmHOX2a(2)   acaaaactagaatacaagtgggcatggaaaagtattagtatttatcctcacaaaaagtaaaattacatttaatgtgacgttgatatatacgatcagcttc  4026900                                   --------->ANAC58                                   --------->ANAC58       --------->YAB1            ---------->DOF2       <--------ATHB1      <---------ANAC58       --------->ATHB12    <---------ANAC46      <---------YAB1       <---------ANAC58  <---------TOE2(3)       <-----------------------TaNAC69(2) <-----------GT1        --------->ALFIN1 -At4g35610           <-----------RAV1(1) >At4g35610   ---------->DOF2<------NtERF2                                            --------->ATHB12   tattaacaatgatagaaaaagaaaatgtggcgtctaaaagcaaaatactatcgtcgttcattttccatctatattttagttgattcaaacattggttttg  4027000                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                                <----                                                                                                <----                                                                                                -----                                 <-------TEIL                                             --------->REM1(1)                              <------MYB46(1)                                  --------->ARR11(3) ---                     <---------MYB46(3)                    <---------ANAC46    <---------ARR11(3)----                  <---------ANAC58                        --------->ALFIN1    --------->RVE1(1) -----                  <---------ANAC58                  <---------AHL20(2)    --------->AHL20(2)    -----       <---------ANAC58       <------MYB83---------->ID1<-----------RAV1(1)   --------->CCA1(1) <----       <---------ANAC58      <---------TOE1(2)      --------->AHL20(2)    <---------AHL20(2)    <----   agtttatatgcgtagggtttgagtggttttgtaggttcacatttgtccccatttttaaatgtggtggaagttgaatataaatatctatacttacaacacc  4027100       --------->YAB1    --------->YAB1    --------->WOX13(1)   --------->AHL20(2) --------ATHB12                                                      --------->ANAC46 ------->MYB46(3)                                                    --------->ANAC55(2) ----->P    --------->MYB52(1)                                       --------->ANAC58 --->MYB46(1)                                           --------->MYB59     ========================= -----MYB111(2)          ----------->GT1                --------->DAG2 <---------MYB52(1)  --------->GLK1(2) -----MYB111(1)  <---------ARR14(2)                     <---------TOE2(3)   --------------->AGL15 ---->MYB46(3)<---------TOE2(3)                         <---------------AtSPL8   --------->AHL20(1) --->MYB83  <-----------GT1                       ==========================================MADS_MADS ----->MYB55(1)  --------->ARR14(2)               <---------------AGL15--------->DOF5.7(2) <--------- ---->AtMYB61<---------LBD16---------->DOF2       <---------YAB1     --------->ANAC58     <---------GLK1(2) ---->DEAR3(1)--------->ANAC55(2)               --------->YAB1     <-----------GT1    ---------->DOF2 -----MYB55(2)<---------ANAC55(2)   <-----------GT1     --------------->AtSPL3   <---------AHL20(1) -----MYB46(2)<---------ANAC46     --------->AHL20(2)   --------------->AtSPL8  <---------AHL20(2)  <   aaccattaatcaaattacggattggagtagtaaagaattaactataccatttataaataaggtaccaattcacgttatctatatatattaaagaatctaa  4027200  Previous    Next  AGI:  At5g12420.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G16350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48523.1); contains InterPro domain Protein of unknown function UPF0089 (InterPro:IPR004255); contains InterPro domain Protein of unknown function DUF1298 (InterPro:IPR009721) Range:  from: 4024315    to: 4026742    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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