Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                                     --------->REM1(2)                                                                                   <-------MYC3                          --------->ANAC58                                         ------->MYC3<-----                          --------->ANAC58                                         <---------------AtSPL8                      ---------->DOF2                        <---------At4g35610  <---------ANAC46  <     --------->AHL20(1)   --------->ANAC46    ---------->DOF2<-------GAMYB--------->GLK1(2)  <-------  ----------->GT1   --------->TOE2(3)        <---------AHL20(2)        --------->ARR11(3)  <------ZmHOX2a(1) --------->DOF2     --------->TOE1(3)       --------->AHL20(2)         <---------ARR11(3) --------->ANAC46 ->MYB52(1)    <------ZmHOX2a(1)            <---------AHL20(2) <---------MYB46(3)<-------------------   gagaaagtatattactaggaaacctaaaacgcaattcgaccagaaattaaaagggctaagttcagttgttgaagataatctgaaacgtgtacaggaaatc  4023600                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                             <-------                                                                                             --------                                                                                    <---------ANAC55(2)   <---------TOE2(3)                                                                --------->ANAC58   <---------HSFB2a(2)                                                              --------->ANAC55(2)   --------->HSFB2a(2)                                                              --------->ANAC46 ->GLK1(1)<---------ZAT14                                                           --------->ANAC58 ----ATHB12   ----------->HVH21                                                   --------->MYB52(1) ---------AHL20(2)    ----------->GT1               <---------ATHB12            <----------DOF2<----- --GLK1(1)--------->ZAT14                    --------->At4g35610                <---------DAG2 <----- ----TaNAC69(2)  --------->ZAT6              <---------At4g35610    ---------->DOF2<---------LBD16   aatttatggaagagcagtgacactaggtaaaatatgaactagttgggagatgaaatcaatttcaacaaaaaaaagagagaaactttacggaatcaatgac  4023700                                 <------NtERF2                                --------->ANAC58                                --------->RAP2.6(2)                 <---------ANAC46------>NtERF2                --------->At4g35610--------->DEAR3(1)                                ------>ZmHOX2a(2)        ----------->RAV1(2)  <---------SPL7                                         <------ZmHOX2a(2)     <---------ANAC58  <---------GLK1(1)                                           --------->ARR11(3)     <---------ANAC58  --------->ARR14(2)                                          <---------ARR11(3) ----->TOE2(3)  --------->ZAT2 --------->SPL7                         <---------------AGL15 ------>GT1     <---------ZAT2<---------ATERF1(1)                     --------------->AGL15    ------ -----ANAC46 <---------At4g35610--------->ANAC46        --------->TOE2(3)    ----------->GT1   <----- --ATHB12 --------->LBD16   <---------ANAC58   ----------->GT1  --------->ZAT2     <---------ARR14(2) --->TGA1 ------>ZmHOX2a(1) <---------ANAC58 --------->CCA1(2)  ----------->RAV1(2)--------->ARR14(2) ------------------TaNAC69(2)<-----------HVH21<-----------------------TaNAC69(2) ----------->ARR10 ----TOE2(3) --------->At4g35610--------->ANAC58        --------->TOE1(3)---------->DOF2    <<<<<<<<<TBF1   gttaatagcttcctgagcagcttggaattcgcgtccgccatcgcaagagatgaaaaaaccttgaacacctggcttcaaagggtaagatcccttcttcttc  4023800                                                                                             <-------                                                                                             <-------                                                                                             <-------       --------->At4g35610                               --------->At4g35610                 --------       <---------At4g35610                               <---------At4g35610                 <------- --->ZAT14                        <---------AHL20(2)  <---------At4g35610                    <------- ----ZAT14                        --------->AHL20(2)  --------->At4g35610          ----------->HVH21   actggtctctgctaacaacaaattagacgaagaaaattaaacacatgagaatagttagcagctaatccacagatagacttagtgtgtgaaagattacgtt  4023900                                                 <-----------HVH21                                          --------->ANAC58                                          --------->ANAC58                                         --------->SPL7        ---------->DOF2                --------->LBD16 --ANAC55(1)                         --------->At4g35610                                 *TSS --ANAC58                            <---------LBD16                                    --------->At4g35610 --ANAC58                           --------->MYB52(1)                                  <---------At4g35610 ->ANAC55(2)                       <---------WRKY12  <------NtERF2              --------->LBD16 --ANAC46                          <---------WRKY38(1)          ---------->DOF2<---------ANAC46    -- --ANAC55(2)                     <-----------HVH21 <---------DEAR3(1)         <---------LBD16      --   ttgagggcgataatgctgttttctcttcttgctctggtcaccggaagccatcgtcggagagagagagaaagagaggtttttgcggagttgagctaaacac  4024000                    --------->WRKY18(1)                   <-----------HVH21                  <------MYB46(1)                    <---------WRKY18(1)                  --------->ANAC58      <------ZmHOX2a(1)  ----------------->AGL1     ----------->HVH21                     --------->ANAC58  <---------bZIP60(2)    <-----------------AGL1<------MYB83                          <---------YAB1  <---------O2   --------->MYB59               <------MYB46(1)              --------->DOF5.7(2)  <---------ANAC46<------MYB83              <---------ANAC58                <---------MYB52(1) --------->TGA1<---------MYB52(1)           <---------ANAC58  --------->At4g35610<----------DOF2 --------->HVH21 --------->MYB46(2)   <------------CBF     <---------MYB52(1)   --------->TOE2(3)   agtgacgaggagaattagttaggtcatgcctgaatgggcctattgggcttggtcttgacccattagctaaaacccctcgttacctttgtgataagcctga  4024100                                                               <-------GAMYB                                                              <---------MYB46(3)                                                              ----------->GT1                                                              <------MYB46(1)                                                              <------MYB83                                                --------->TOE2(2)                                                --------->TOE1(2)                                               ----------->RAV1(2) <---------YAB1           <------MYB83                                 <---------ANAC46            <---------AtMYB61              <------MYB46(1)                                 <---------ANAC58         --------->ALFIN1                <--------P      <----------DOF2            <---------AtLEC2         <-----------RAV1(1)            <---------ANAC58   <---------ARR11(3)            <---------ANAC58     <---------ZAT14                    <---------ANAC58   --------->ARR11(3)       <---------ICU4     =======================RAV               <---------MYB46(3)  <---------CCA1(2)      --------->TOE2(3)------>ZmHOX2a(2) <--------P                  --------->ATHB12   tactatatctttcacatttttgttaattcttaattgcatgttgatcgaaacctgagagaagtgttggttatatttgtatcgttggaaaattggttgggcg  4024200                                                                                          <----------                                                                                         <---------ANAC58                                                                                         <---------ANAC58                                                                                        <---------At4g35610                                                                                       <---------MYB46(3)                 ------->TEIL                                                         <--------P      <-------GAMYB<---------DAG2                                                    <-------GAMYB     ----------->GT1          <---------ZAT6                                       <------NtERF2     <---------MYB46(3)   <---------ZAT14                                        --------->ALFIN1     --------->MYB55(2)  --------->TOE2(3)                 ----------->GT1     --------->ZAT2  ------   <---------MYB52(1)    <----------DOF2      <-----------GT1                <-----------RAV1(2)   <- <---------DREB2C(2)<----------DOF2 <---------ANAC55(2)<---------YAB1     <---------YAB1--------->At4g35610   atatcggtggttatatatgcacctttactttagtgatcacctaagaattttcaatttttcattgtaaatttaagttataacaggtggggttgctgatcaa  4024300                            ----------->TGA1                                                       --                            ----------->HVH21         --------->ANAC46                          <----                     --------->ATHB12                 --------->ANAC58                          -----                    <---------YAB1               ========================HOX2a_HOX2a            <----                  --------->bZIP60(1)            =========================HOX2a_HOX2a           <----                  <---------bZIP60(1)          --------->MYB59     ------>ZmHOX2a(2)            -----                  --------->bZIP60(2)      <---------AHL20(2)     --------->GLK1(1)            ------              <-----------HVH21           --------->AHL20(2)      <------ZmHOX2a(2)            ------         <-----------GT1   <---------WOX13(1) <---------ICU4     --------->ARR11(3)      <-----------GT1 -----AGL15  --------->ANAC46             <---------AHL20(2)     <---------ARR11(3)--------->AHL20(1) ---->DOF2   --------->ANAC58         <---------YAB1  --------->ANAC58             <---------AHL20(1) ---------ID1--------->ANAC58     <----------DOF2<------ZmHOX2a(1)<---------GLK1(1)<---------AHL20(2)   agaaacaaaattcacaagtcacatcattgaatgacgctttcttattaattaggactacgaaaaatgagatctcttaatattctaaaatatttgacaatac  4024400      <---------ICU4   ------>MYB46(1)   ------>MYB83 --------->TOE1(2) <---------MYB46(2) <---------MYB59           ------>MYB46(1) <---------MYB111(1)       ------>MYB83 ----->TEIL             --------->DEAR3(2) -----ANAC55(2)      --------->WRKY12 ---->ANAC55(2)      --------->ZAT14 -----ANAC58         --------->WRKY38(1) -----ANAC58   <---------ALFIN1<---------YAB1 ---->ANAC46 ----------->RAV1(1)   <-----------GT1 --------->AtSPL3    <---------ZAT14        <-----------GT1              ---------->DOF2         ---- --------->AtSPL8   --------->ALFIN1     <---------AHL20(2) <---------AHL20(2)                 ------   gtacctactaatttccaacacagtggaccgactcttattacatttttttctgactccaatatttatagatactacaaaagcattgaaaactgctaaaaca  4024500  Previous    Next  AGI:  At5g12410.1    Description:  THUMP domain-containing protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO16816.1); similar to Os11g0568600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068115.1); contains InterPro domain THUMP (InterPro:IPR004114) Range:  from: 4021816    to: 4023989    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g12420.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G16350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48523.1); contains InterPro domain Protein of unknown function UPF0089 (InterPro:IPR004255); contains InterPro domain Protein of unknown function DUF1298 (InterPro:IPR009721) Range:  from: 4024315    to: 4026742    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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