Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->ARR14(2)                       --------->GLK1(2)                      --------->GLK1(1)                      <---------GLK1(1)                     <------ZmHOX2a(1)          ==================HOX2a_HOX2a          <------ZmHOX2a(2)          --------->CCA1(2)         >>>>>>>>>GATA-2         >>>>>>>>>GATA-3         <---------ARR11(3)         --------->AGP1<---------ARR14(2)         >>>>>>>>>GATA-4              ----------->GT1                                 <-----------GT1         >>>>>>>>>GATA-1    <---------MYB52(1)                                    <----------DOF2         --------->ARR11(3)--------->LBD16                                     ------>NtERF2 ------->TEIL    --------->LBD16  <---------ZAT14                              <------NtERF2 -------->MYB52(1)<------NtERF2   --------->ZAT14                             <---------ZAT18 ----DEAR3(1)  <---------LBD16--------->ARR14(2)       ---------->DOF2       <---------ANAC58 ->LBD16--------->GLK1(1)<---------LBD16          ----------->GT1            <---------ANAC58    ---- >ATERF1(2)=================HOX2a_HOX2a     ---------->DOF2                  <---------ANAC46    <--- -ATERF1(2)------>ZmHOX2a(2)--------->At5g28300--------->MYB52(1)           <---------LBD16      ----   atgaacggagagatctagccggaggaatccggtaactgcagggagaaaaagacggagaaaagagagacggtcttcaatggcggacttttcacaactatga  4008800                                                              <---------TOE2(3)                      <---------AHL20(2)                     --------->MYB52(1)                      --------->AHL20(2)                     <---------DOF5.7(2)                      --------->AHL20(1)                  <-------GAMYB                      <---------AHL20(1)                 <---------DEAR3(2)                     <---------AHL20(2)                --------->SPL7              ----------->GT1                        <---------SPL7      ------>ZmHOX2a(1)       <-----------GT1      --------->DEAR3(2)                        <-------     *TSS   --------->At4g35610                ------>ZmHOX2a(1)                            ---------    ----------->RAV1(2)    <---------AHL20(2) --------->TOE2(3)                      ----------->GT1 ----->ZAT2 <---------At4g35610              <-----------------AGL1          ----------->GT1<-------- ------At4g35610     --------->AHL20(2)      ----------------->AGL1     <<<<<<<<<<WRKY26    <-------- ----->At4g35610<---------MYB52(1)           ----------------->AG ------->TEIL <---------MYB52(1)   gctccctcctgatgagctgttaattttattttatacgagtttttttttcctaaaccggccggttaacgaatttgatcaactgttaatttgttaatttttt  4008900         <---------ARR11(3)         --------->AHL20(1)                                      ------>ZmHOX2a(1)         <---------AHL20(1)                                     <---------ANAC58         --------->ARR11(3)                                     <---------ANAC58               ------        --------->YAB1                                   --------->YAB1                       <------ <---------TOE2(3)                                       --------->AHL20(2)                  -------- --AHL20(2)                    <---------MYB52(1)       <---------ATHB12               --------->AHL20(2) >AHL20(2)                   <---------ZAT6        --------->ANAC58  --------->YAB1--------->LBD16--- -AHL20(2)          <---------ANAC58     <---------ZAT6 <---------ATHB51  --------->TOE2(3) --------- -AHL20(1)          <---------ANAC58<----------DOF2--------->ANAC58 <---------YAB1 ------>ZmHOX2a(1)   tctaaggcaaaaatatttgtgttcgtgtttacagttagcttttgtgttatgggatgcaataatattccttatgaaaacttaattcctgaaaaaataacgg  4009000                        --------->DOF5.7(2)                      <---------ANAC46                      <---------ANAC58                      <---------ANAC58                   ----------->TGA1                   <---------AtMYB61                   <---------DEAR3(1)                   --------->ALFIN1                  <---------ABI4(1)                                        <---------MYB52(1)                 <---------ANAC58                               ------------>CBF ->GAMYB         <---------ANAC58                           ------------>CBF ----ID1<-------TEIL <------NtERF2                   ----------->GT1<---------ATHB12 ->RAP2.6(3)     --------->ALFIN1                  ---------->DOF2--------->WOX13(1) ------->DOF2--------->DAG2                    <---------YAB1 --------->WOX13(1) >MYB52(1)  ---------->DOF2                    <---------TOE2(3)<---------ATHB12                   --   caaagtcatatacataaaggggtggcgttaacagagagagtttcagattaacatagagcaaaaacaatcaatgagccgtttgaaacattttctggtctct  4009100                                                                                             <-------                                               --------->ANAC46                              --------                                               --------->ANAC58                             ---------                                               --------->ANAC58                             <--------                                             ---------->DOF2                                <--------                      -------->P         <---------ZAT14                                    ---------             <---------YAB1              --------->ZAT18      <---------ARR11(3)            <--------         <-----------GT1      <---------AHL20(2)         ------------>CBF                   ---------      ----------->GT1 ------>MYB46(1)    <---------ZAT18--------->ANAC58                   --------->ARR11(3)    <------------CBF  ------>MYB83  <---------YAB1      --------->ANAC58                   <---------ARR11(3) -------->DOF2<---------ICU4  --------->AHL20(2)------------>CBF                       ---------->DOF2   tcaaagcattgtaacatcattaccaactcttataaattaagagtgctcaaagcaatggaagcaatatccaacaagtgattaatctgagtcaaagatatct  4009200                                                                                           <---------TOE2(3)                                                                                           <---------TOE1(3)                                                                                    <---------ANAC46                                                                                    <---------ANAC58        ----------->GT1                                                            <------NtERF2 --ARR11(3)                                                                       <---------RAP2.3(1) ->ARR11(3)                                                                       ------>NtERF2 >RVE1(1)                                                                        <---------RAP2.3(3) -RVE1(1)                                                                        <---------RAP2.3(2) -CCA1(1)                                 <---------ALFIN1                       <---------DEAR3(1) >GLK1(1)                               ------>ZmHOX2a(1)        --------->At4g35610<---------ANAC58 -GLK1(1)                 ------>NtERF2--------->ANAC46 <-----------HVH21        <---------RAP2.6(2)< >CCA1(1)                --------->RAP2.6(2)         ----------->RAV1(2)        --------->RAP2.6(3) <   tacgcagaaacagaaaaaacaaaatggccaccattgtttctcctccacatttctcccctgtcgaagacgctgaaaacatcaaggcggcttgtcaaggttc  4009300                                                                                                -----                                                                                              <------ZmHOX2a(1)                                                                                      <---------ANAC58                                              <---------ANAC58                        <---------ANAC58     <----------DOF2                          <---------ANAC58         <----------DOF2<---------ANAC46 ---------DAG2                     <-------TEIL                   ------>ZmHOX2a(1)  ---------->ID1 ----------DOF2<---------ZAT6<-----------RAV1(1)          <----------DOF2   <-----------GT1 <--------   tacttttctttggattagtgtttcaaaacttatgtggttcatcaagtttcttgctatctcctttactcctcttctttatttctatttggcgttttaggat  4009400                                                                                                  ---                                                                                                 <---                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                <----                                         <---------GLK1(2)                      =====================                                       --------->LBD16    --------->At4g35610   <------ZmHOX2a(1)----                                     <---------LBD16      <---------At4g35610   =====================        --------->YAB1              --------->MYB52(1) <------ZmHOX2a(1)     <---------LBD16    <----       <---------ATHB12     ==================================HOX2a_HOX2a    <-----------RAV1(2)-----   --------->MYB46(3)       ------>ZmHOX2a(2)      --------->LBD16         -------->P          <----- ---->ALFIN1              <---------ARR11(3)      --------->HSFB2a(2) --------->ANAC58 <---------At5g28300 -TOE2(3)          <---------ICU4<------ZmHOX2a(1)<---------HSFB2a(2) --------->ANAC58<-----------GT1   ggggaaccaatgaaaatgccatcatctcgatcttaggacaccggaatttgttccagaggaagctcataagacaagcttaccaggagatttaccatgagga  4009500         --------->ZAT2         <---------ZAT2         <---------At4g35610         --------->At4g35610 --->ZmHOX2a(2) ---ZmHOX2a(2) ------GLK1(1) ---->GLK1(2) -----AGP1 ---->ARR11(3)                                                    ------->MYC2 -----ARR11(3)                                               ------>ZmHOX2a(1) -------ARR10        --------->At4g35610              <---------CCA1(2) ====HOX2a_HOX2a     <---------At4g35610         <---------AHL20(2) --------->ZAT18 ----->GLK1(1)       --------->ZAT2           <---------ARR11(3)  <-------MYC2 ===HOX2a_HOX2a<---------ARR14(2)             --------->ARR11(3)  <-------MYC3                     -- -----ARR14(2) <-----------ARR10      <---------TOE2(3)--------->ARR11(3)                        ---- ---->ARR14(2) --------->ARR14(2)     <---------TOE1(3)<---------ARR11(3) --------->ANAC46 --------->YAB1 -ZmHOX2a(1)  <---------CCA1(2)  --------->ICU4 --------->AHL20(2)------->MYC3            <---------ATHB12   tctcattcaccagctcaaatctgagctctctggcaattttgaggtttagattttatatatctcctccatgtgctctactctactctatttcaataatcca  4009600                   <---------ANAC58                   ----------->RAV1(2)                   <---------ANAC58          <---------AHL20(2)         --------->AHL20(2)         <---------AHL20(1)         <---------AHL20(2)                                      --------->CCA1(2)         --------->AHL20(1)                         <------ZmHOX2a(2)         <---------ARR11(3)                        <---------ARR14(2)         --------->ARR11(3)                        --------->ARR14(2)        --------->AHL20(2)           <---------ANAC58     --------->LBD16  ----------->GT1  <---------ANAC46  <---------ANAC58    --------->HSFB2a(2) -------->DOF2     --------->At4g35610<----------DOF2  ------>ZmHOX2a(1) ----->ANAC46    <-----------GT1     <---------ANAC46------>ZmHOX2a(2)                        -------   caaaagataaatatatttgttacctgcagagagctatttgcttgtgggtcttggatcctccagagagagatgctctcttggctaacttggctcttcaaaa  4009700  Previous    Next  AGI:  At5g12370.1    Description:  SEC10 (EXOCYST COMPLEX COMPONENT SEC10). Identical to Exocyst complex component 5 (SEC10) [Arabidopsis Thaliana] (GB:Q8RVQ5;GB:Q56W60;GB:Q94CK5); similar to hypothetical protein OsJ_034291 [Oryza sativa (japonica cultivar-group)] (GB:EAZ20082.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39645.1); similar to hypothetical protein OsI_036660 [Oryza sativa (indica cultivar-group)] (GB:EAY82701.1); contains InterPro domain Exocyst complex component Sec10; (InterPro:IPR009976) Range:  from: 4002776    to: 4008805    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g12380.1    Description:  annexin, putative. similar to ANN7/ANNAT7 (ANNEXIN ARABIDOPSIS 7), calcium ion binding / calcium-dependent phospholipid binding [Arabidopsis thaliana] (TAIR:AT5G10230.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16837.1); contains InterPro domain Annexin like protein (InterPro:IPR015472); contains InterPro domain Annexin, type plant (InterPro:IPR009118); contains InterPro domain Annexin; (InterPro:IPR001464) Range:  from: 4009224    to: 4010688    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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