Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------ALFIN1                                                      --------->AtMYB61                                               ------->GAMYB                                         --------->ANAC58                               <------ZmHOX2a(1)                           ----------->GT1   --------->At4g35610                        =============                  <---------YAB1         --------->ANAC58  --------->TOE1(3)         --------->At4g35610          <---------ARR11(3) ----------->GT1--------->MYB52(1)---------->DOF2    --------->GLK1(2) --------->AHL20(2)      ---------->DOF2 --------->ANAC46  --------->TOE2(3)    --------->YAB1    ---   aaaaaaaatcaatatcccttatgattcaaaagtgaaaaaacataagcaactgaaaacctcaccttaaagtcttcaatgtcaagaatcagaggaacagagt  4008400               --------->ARR14(2)           ------>ZmHOX2a(2)           ===============HOX2a_HOX2a         <---------ARR14(2)         <---------ARR11(3)                                                               <------ZmHOX2a(2)         --------->ARR11(3)                          ----------->GT1                     <---------ARR11(3)     =============HOX2a_HOX2a                   --------->AHL20(2)                       --------->ARR11(3)     <------ZmHOX2a(1)     <---------YAB1 --------->At4g35610                           <---------At4g35610 =================HOX2a_HOX2a             <---------At4g35610                      ----------->HVH21 ------>MYB52(1)   ------>ZmHOX2a(1)  <-----------HVH21                    --------->GLK1(2)   taacagaggatgatctgggtcctcttgctctgattccttctgtcatctgataaaatggaaaattcaaagaattgaagaatcaagtctgacagatcatata  4008500                                                                     <---------ARR14(2)                                                                     --------->ARR11(3)                                                                     <---------ARR11(3)                                         <---------GLK1(2)           --------->ARR14(2)                                <---------YAB1                  <---------ANAC46                            <---------ANAC46                    <---------ANAC58                            <---------ANAC58             --------->ZAT14                        --------->CCA1(2)--------->ARR14(2)     ----------->GT1                   ---------->DOF2   <---------LBD16     --------->ZAT18          <---------AHL20(2)<---------ANAC58             <---------ZAT18         <---------ATHB12   --------->ANAC55(2)          <---------ZAT14                     <-------         --------->AHL20(2)<-------TEIL  <---------ARR14(2)     <---------ANAC58 --------->MYB59       <---------------AGL15<---------ANAC55(2)    --------->YAB1   <---------CCA1(2)       ---------       --------------->AGL15<---------ANAC55(1)   <---------ATHB12 ----------->ARR10      <---------LBD16   tgaaacattcaataaatagcagaaagagatgcgtatgattctggattcttcaatgatactacactagcgtaaatcttctaagttaagtcatcaccggtaa  4008600                                                          --------->ANAC58                                                          --------->ANAC58                                                          --------->ANAC46                      <-----------------AGL3             <---------LBD16                    ----------->RAV1(1)                 <---------ALFIN1                 --------->ANAC58                     <---------ALFIN1                 --------->ANAC58                    --------->ZAT18                           <-----             --------->DEAR3(1)                      <---------ZAT18                         --------           --------->At4g35610                   <---------ATHB12       ----------->GT1     <--------           ------>NtERF2                        ------>MYB46(1)  <----------ID1             ---------          --------->DEAR3(1)                    ------>MYB83     ----------->GT1           --------->DEAR3(2)    --------->ZAT14<----------ID1          >>>>>>>>>>WRKY43     ----------->GT1           --------->MYB52(1) --MYB52(1)--------->LBD16                 >>>>>>>>>>WRKY38   ---------->DOF2             -------->P- >LBD16  <---------LBD16                   >>>>>>>>>>WRKY26--------->LBD16             <---------MYB52(2)   tcgctgtttactccgccgaatgcaacaaaatttagaacctatagatgaccaatcgcgcacacgggaaaggaaaaatgtaatatggagcaacttaccggcg  4008700                       --------->GLK1(2)                       <---------ARR14(2)                      <---------GLK1(1)                      --------->GLK1(1)                     <------ZmHOX2a(1)          <------ZmHOX2a(2)          ==================HOX2a_HOX2a          --------->CCA1(2)         >>>>>>>>>GATA-4         >>>>>>>>>GATA-1         --------->AGP1--------->ARR14(2)         >>>>>>>>>GATA-2         --------->ARR11(3)           ----------->GT1                                 <-----------GT1         <---------ARR11(3) <---------MYB52(1)                                    <----------DOF2         >>>>>>>>>GATA-3   --------->LBD16                                     <------NtERF2 ------->TEIL    --------->LBD16  --------->ZAT14                              ------>NtERF2 ----DEAR3(1)  <---------LBD16--------->ARR14(2)                              <---------ZAT18 ->LBD16--------->GLK1(1)<---------LBD16               ---------->DOF2       <---------ANAC58 -ATERF1(2)=================HOX2a_HOX2a     ---------->DOF2                  <---------ANAC46    ---- >ATERF1(2)------>ZmHOX2a(2)--------->At5g28300--------->MYB52(1)            <---------ANAC58    ---- -------->MYB52(1)<------NtERF2   <---------ZAT14 ----------->GT1           <---------LBD16      <---   atgaacggagagatctagccggaggaatccggtaactgcagggagaaaaagacggagaaaagagagacggtcttcaatggcggacttttcacaactatga  4008800                                                              <---------TOE2(3)                      <---------AHL20(2)                     --------->MYB52(1)                      --------->AHL20(2)                     <---------DOF5.7(2)                      <---------AHL20(1)                  <-------GAMYB                      --------->AHL20(1)                 <---------DEAR3(2)                     --------->AHL20(2)                --------->SPL7              ----------->GT1                        <---------SPL7      ------>ZmHOX2a(1)       <-----------GT1      --------->DEAR3(2)                        <-------     *TSS   <---------At4g35610                ------>ZmHOX2a(1)                            <--------    ----------->RAV1(2)    <---------AHL20(2) --------->TOE2(3)                      ----------->GT1 ----->ZAT2 --------->At4g35610              <-----------------AGL1          ----------->GT1--------- ----->At4g35610     <---------AHL20(2)      ----------------->AGL1     <<<<<<<<<<WRKY26    <-------- ------At4g35610<---------MYB52(1)           ----------------->AG ------->TEIL <---------MYB52(1)   gctccctcctgatgagctgttaattttattttatacgagtttttttttcctaaaccggccggttaacgaatttgatcaactgttaatttgttaatttttt  4008900         <---------ARR11(3)         --------->AHL20(1)                                      ------>ZmHOX2a(1)         --------->ARR11(3)                                     <---------ANAC58         <---------AHL20(1)                                     <---------ANAC58               ------        --------->YAB1                                   --------->AHL20(2)                   <------ <---------TOE2(3)                                       --------->YAB1                      -------- --AHL20(2)                    <---------MYB52(1)       <---------ATHB51               --------->AHL20(2) -AHL20(2)                   <---------ZAT6        --------->ANAC58  --------->YAB1--------->LBD16--- >AHL20(2)          <---------ANAC58     <---------ZAT6 <---------ATHB12  --------->TOE2(3) --------- -AHL20(1)          <---------ANAC58<----------DOF2--------->ANAC58 <---------YAB1 ------>ZmHOX2a(1)   tctaaggcaaaaatatttgtgttcgtgtttacagttagcttttgtgttatgggatgcaataatattccttatgaaaacttaattcctgaaaaaataacgg  4009000                        --------->DOF5.7(2)                      <---------ANAC46                      <---------ANAC58                      <---------ANAC58                   <---------AtMYB61                   --------->ALFIN1                   <---------DEAR3(1)                   ----------->TGA1                  <---------ABI4(1)                                        <---------MYB52(1)                 <---------ANAC58                               ------------>CBF ->GAMYB         <---------ANAC58                           ------------>CBF ----ID1<-------TEIL <------NtERF2                   ----------->GT1<---------ATHB12 ->RAP2.6(3)     --------->ALFIN1                  ---------->DOF2--------->WOX13(1) ------->DOF2--------->DAG2                    <---------TOE2(3)<---------ATHB12 >MYB52(1)  ---------->DOF2                    <---------YAB1 --------->WOX13(1)                   --   caaagtcatatacataaaggggtggcgttaacagagagagtttcagattaacatagagcaaaaacaatcaatgagccgtttgaaacattttctggtctct  4009100                                                                                             --------                                               --------->ANAC46                              <-------                                               --------->ANAC58                             <--------                                               --------->ANAC58                             ---------                                             ---------->DOF2                                ---------                      ------>MYB83       <---------ZAT18                                    <--------             <---------YAB1              <---------ZAT14      <---------ARR11(3)            <--------         <-----------GT1      --------->AHL20(2)         ------------>CBF                   ---------      ----------->GT1 ------>MYB46(1)    --------->ZAT18--------->ANAC58                   --------->ARR11(3)    <------------CBF  -------->P    <---------YAB1      --------->ANAC58                   <---------ARR11(3) -------->DOF2<---------ICU4  <---------AHL20(2)------------>CBF                       ---------->DOF2   tcaaagcattgtaacatcattaccaactcttataaattaagagtgctcaaagcaatggaagcaatatccaacaagtgattaatctgagtcaaagatatct  4009200                                                                                           <---------TOE2(3)                                                                                           <---------TOE1(3)                                                                                    <---------ANAC58                                                                                    <---------ANAC46        ----------->GT1                                                            <------NtERF2 ->ARR11(3)                                                                       ------>NtERF2 --ARR11(3)                                                                       <---------RAP2.3(1) -RVE1(1)                                                                        <---------DEAR3(1) >RVE1(1)                                                                        <---------RAP2.3(3) >GLK1(1)                                 <---------ALFIN1                       <---------RAP2.3(2) -GLK1(1)                               ------>ZmHOX2a(1)        --------->At4g35610<---------ANAC58 -CCA1(1)                 ------>NtERF2--------->ANAC46 <-----------HVH21        <---------RAP2.6(2)< >CCA1(1)                --------->RAP2.6(2)         ----------->RAV1(2)        --------->RAP2.6(3) <   tacgcagaaacagaaaaaacaaaatggccaccattgtttctcctccacatttctcccctgtcgaagacgctgaaaacatcaaggcggcttgtcaaggttc  4009300  Previous    Next  AGI:  At5g12370.1    Description:  SEC10 (EXOCYST COMPLEX COMPONENT SEC10). Identical to Exocyst complex component 5 (SEC10) [Arabidopsis Thaliana] (GB:Q8RVQ5;GB:Q56W60;GB:Q94CK5); similar to hypothetical protein OsJ_034291 [Oryza sativa (japonica cultivar-group)] (GB:EAZ20082.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39645.1); similar to hypothetical protein OsI_036660 [Oryza sativa (indica cultivar-group)] (GB:EAY82701.1); contains InterPro domain Exocyst complex component Sec10; (InterPro:IPR009976) Range:  from: 4002776    to: 4008805    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g12380.1    Description:  annexin, putative. similar to ANN7/ANNAT7 (ANNEXIN ARABIDOPSIS 7), calcium ion binding / calcium-dependent phospholipid binding [Arabidopsis thaliana] (TAIR:AT5G10230.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16837.1); contains InterPro domain Annexin like protein (InterPro:IPR015472); contains InterPro domain Annexin, type plant (InterPro:IPR009118); contains InterPro domain Annexin; (InterPro:IPR001464) Range:  from: 4009224    to: 4010688    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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